Clone Information

BLAST Search Result

Clone Name	rbastl02d06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CLK2_HUMAN (P49760) Dual specificity protein kinase CLK2 (EC 2.7...	32	0.78
2	SRP2_SCHPO (P78814) Pre-mRNA-splicing factor srp2	31	1.0
3	CLK2_MOUSE (O35491) Dual specificity protein kinase CLK2 (EC 2.7...	30	2.3
4	GLNA_BUTFI (Q05650) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	30	2.3
5	HSP1_SMILO (Q9TUC2) Sperm protamine P1	30	2.3
6	GAG_BLVAU (P25058) Gag polyprotein [Contains: Core protein p15 (...	29	3.8
7	HSP1_THYCY (P67846) Sperm protamine P1	29	3.8
8	HSP1_SMIYO (Q71UF8) Sperm protamine P1	29	3.8
9	HSP1_SMIVI (Q71UF9) Sperm protamine P1	29	3.8
10	HSP1_SMIPS (Q71UG0) Sperm protamine P1	29	3.8
11	HSP1_SMIOO (Q71UG1) Sperm protamine P1	29	3.8
12	HSP1_SMIMU (Q71VP9) Sperm protamine P1	29	3.8
13	HSP1_SMIMA (Q71VP8) Sperm protamine P1	29	3.8
14	HSP1_SMILE (Q71UG2) Sperm protamine P1	29	3.8
15	HSP1_SMIHI (Q71UG3) Sperm protamine P1	29	3.8
16	HSP1_SMIGI (Q71UG5) Sperm protamine P1	29	3.8
17	HSP1_SMIGA (Q71UG4) Sperm protamine P1	29	3.8
18	HSP1_SMIDO (Q71UG6) Sperm protamine P1	29	3.8
19	HSP1_SMIDL (Q71UG7) Sperm protamine P1	29	3.8
20	HSP1_SMICR (P67844) Sperm protamine P1	29	3.8
21	HSP1_SMIAR (Q71UG8) Sperm protamine P1	29	3.8
22	HSP1_SMIAI (Q71UG9) Sperm protamine P1	29	3.8
23	HSP1_PLAMM (Q71VP4) Sperm protamine P1	29	3.8
24	HSP1_PHATA (P67847) Sperm protamine P1	29	3.8
25	HSP1_PHACL (Q71V10) Sperm protamine P1	29	3.8
26	HSP1_NINYV (Q71VP6) Sperm protamine P1	29	3.8
27	HSP1_NINTI (Q71VP5) Sperm protamine P1	29	3.8
28	HSP1_NINRI (Q71VP7) Sperm protamine P1	29	3.8
29	HSP1_MYRFA (P67845) Sperm protamine P1	29	3.8
30	HSP1_MURRO (Q71V11) Sperm protamine P1	29	3.8
31	HSP1_MURLO (P67848) Sperm protamine P1	29	3.8
32	HSP1_DASCR (Q71VG8) Sperm protamine P1	29	3.8
33	HSP1_ANTSW (Q71V22) Sperm protamine P1	29	3.8
34	HSP1_ANTST (P42129) Sperm protamine P1	29	3.8
35	HSP1_ANTNA (Q71V12) Sperm protamine P1	29	3.8
36	HSP1_ANTMI (Q71V19) Sperm protamine P1	29	3.8
37	HSP1_ANTME (Q71V14) Sperm protamine P1	29	3.8
38	HSP1_ANTLE (Q71V16) Sperm protamine P1	29	3.8
39	HSP1_ANTHA (Q71V13) Sperm protamine P1	29	3.8
40	HSP1_ANTGO (Q71V17) Sperm protamine P1	29	3.8
41	HSP1_ANTFL (Q71V20) Sperm protamine P1	29	3.8
42	HSP1_ANTBE (Q71V18) Sperm protamine P1	29	3.8
43	HSP1_PSEWO (Q71VG4) Sperm protamine P1	29	5.0
44	HSP1_PSENI (Q71VG5) Sperm protamine P1	29	5.0
45	HSP1_PSEMD (P67832) Sperm protamine P1	29	5.0
46	HSP1_PARBI (O18768) Sperm protamine P1	29	5.0
47	HSP1_PARAP (P67831) Sperm protamine P1	29	5.0
48	HSP1_MYOWA (Q71VG9) Sperm protamine P1	29	5.0
49	HSP1_MYOME (Q71VH0) Sperm protamine P1	29	5.0
50	HSP1_DASRO (P67830) Sperm protamine P1	29	5.0
51	HSP1_DASBY (Q71VG7) Sperm protamine P1	29	5.0
52	CRLS1_HUMAN (Q9UJA2) Cardiolipin synthetase (EC 2.7.8.-) (Cardio...	29	5.0
53	PECA1_RAT (Q3SWT0) Platelet endothelial cell adhesion molecule p...	29	5.0
54	EF2_NEUCR (Q96X45) Elongation factor 2 (EF-2) (Colonial temperat...	29	5.0
55	CAC1E_RABIT (Q02343) Voltage-dependent R-type calcium channel al...	29	5.0
56	LUC7L_HUMAN (Q9NQ29) Putative RNA-binding protein Luc7-like 1 (S...	28	6.6
57	KCNK4_HUMAN (Q9NYG8) Potassium channel subfamily K member 4 (TWI...	28	8.6
58	HSP1_SMIBI (Q9TUC4) Sperm protamine P1	28	8.6
59	ANFD_CLOHU (Q46082) Nitrogenase iron-iron protein alpha chain (E...	28	8.6
60	LAMA2_HUMAN (P24043) Laminin alpha-2 chain precursor (Laminin M ...	28	8.6

>CLK2_HUMAN (P49760) Dual specificity protein kinase CLK2 (EC 2.7.12.1)|
           (CDC-like kinase 2)
          Length = 499

 Score = 31.6 bits (70), Expect = 0.78
 Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSY--RGYRRGIFDRRYAGNHRAGIDRR 227
           RR SR+ W     SS ++  RR     H R  +SY  R   R ++DRRY G++R     R
Sbjct: 29  RRRSRS-WSS---SSDRTRRRRREDSYHVRSRSSYDDRSSDRRVYDRRYCGSYRRNDYSR 84

Query: 226 QDGPAF 209
             G A+
Sbjct: 85  DRGDAY 90

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>SRP2_SCHPO (P78814) Pre-mRNA-splicing factor srp2|
          Length = 365

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -3

Query: 268 RRYAGNHRAGIDRRQDGPAFQPGRRQRLRYTQRSQH 161
           RRY  ++R G D R+D  A++PGR    RY  R ++
Sbjct: 193 RRYRDDYRRGGDYRRD--AYRPGRDDERRYAPRGEY 226

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>CLK2_MOUSE (O35491) Dual specificity protein kinase CLK2 (EC 2.7.12.1)|
           (CDC-like kinase 2)
          Length = 499

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYR--RGIFDRRYAGNHRAGIDRR 227
           RR SR+ W     SS ++  RR     H R  +SY  +   R ++DRRY G++R     R
Sbjct: 29  RRRSRS-WSS---SSDRTRRRRREDSYHVRSRSSYDDHSSDRRLYDRRYCGSYRRNDYSR 84

Query: 226 QDGPAF 209
             G A+
Sbjct: 85  DRGEAY 90

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>GLNA_BUTFI (Q05650) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 700

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
 Frame = -3

Query: 406 SDRRSSRADWQGIRRSSAQSWLRRGFLDQHPR-----HNNSYRGYRRGI 275
           S     R+ W     S  +SWLR   + Q  +     HN+S RGY+ GI
Sbjct: 88  SPTEDGRSSWS----SQEKSWLRANLMHQASQWWSSCHNSSMRGYQHGI 132

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>HSP1_SMILO (Q9TUC2) Sperm protamine P1|
          Length = 61

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRRR 59

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>GAG_BLVAU (P25058) Gag polyprotein [Contains: Core protein p15 (Matrix|
           protein); Core protein p24; Core protein p12]
          Length = 391

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = +2

Query: 146 SQSWIM---LASLRVPQTLSSARLKCWTILPPVNACTMVTSITSIKDATAISAVTVVVPR 316
           SQ WI    LA L+   T +     C  I  PV+    +TS+T+   A A     V++P+
Sbjct: 141 SQVWIQTLRLAILQADPTPADLEQLCQYIASPVDQTAHMTSLTAAIAAEAAIPSRVLIPK 200

Query: 317 M 319
           M
Sbjct: 201 M 201

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>HSP1_THYCY (P67846) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_SMIYO (Q71UF8) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_SMIVI (Q71UF9) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_SMIPS (Q71UG0) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_SMIOO (Q71UG1) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_SMIMU (Q71VP9) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_SMIMA (Q71VP8) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_SMILE (Q71UG2) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_SMIHI (Q71UG3) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_SMIGI (Q71UG5) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_SMIGA (Q71UG4) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_SMIDO (Q71UG6) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_SMIDL (Q71UG7) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_SMICR (P67844) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_SMIAR (Q71UG8) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_SMIAI (Q71UG9) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_PLAMM (Q71VP4) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_PHATA (P67847) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_PHACL (Q71V10) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_NINYV (Q71VP6) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_NINTI (Q71VP5) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_NINRI (Q71VP7) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_MYRFA (P67845) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_MURRO (Q71V11) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_MURLO (P67848) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_DASCR (Q71VG8) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_ANTSW (Q71V22) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_ANTST (P42129) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_ANTNA (Q71V12) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_ANTMI (Q71V19) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_ANTME (Q71V14) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_ANTLE (Q71V16) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_ANTHA (Q71V13) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_ANTGO (Q71V17) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_ANTFL (Q71V20) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_ANTBE (Q71V18) Sperm protamine P1|
          Length = 62

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_PSEWO (Q71VG4) Sperm protamine P1|
          Length = 62

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHRNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_PSENI (Q71VG5) Sperm protamine P1|
          Length = 62

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHRNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_PSEMD (P67832) Sperm protamine P1|
          Length = 62

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHRNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_PARBI (O18768) Sperm protamine P1|
          Length = 61

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHRNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_PARAP (P67831) Sperm protamine P1|
          Length = 62

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHRNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_MYOWA (Q71VG9) Sperm protamine P1|
          Length = 62

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHRNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_MYOME (Q71VH0) Sperm protamine P1|
          Length = 62

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHRNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_DASRO (P67830) Sperm protamine P1|
          Length = 62

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHRNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>HSP1_DASBY (Q71VG7) Sperm protamine P1|
          Length = 62

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHRNRRRTYRRSRRHSRRRRGRRRGYSRRRYSRRGR 59

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>CRLS1_HUMAN (Q9UJA2) Cardiolipin synthetase (EC 2.7.8.-) (Cardiolipin synthase)|
           (CLS) (Protein GCD10 homolog)
          Length = 301

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 182 PQTLSSARLKCWTILPPVNAC 244
           P T  S R  CW +LPPV  C
Sbjct: 21  PGTRPSKRRACWALLPPVPCC 41

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>PECA1_RAT (Q3SWT0) Platelet endothelial cell adhesion molecule precursor|
           (PECAM-1) (CD31 antigen)
          Length = 678

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +1

Query: 73  HH*LFYKDSLAVCN---KLNTAQVVLLQSIMDHAGFFACT 183
           H  LFYKD   V N     +T   V+ QS + HAG + CT
Sbjct: 61  HQVLFYKDDALVYNVSSSEHTESFVIPQSRVFHAGKYKCT 100

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>EF2_NEUCR (Q96X45) Elongation factor 2 (EF-2) (Colonial temperature-sensitive|
           3)
          Length = 844

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 274 FDRRYAGNHRAGIDRRQDGPAFQPGRRQRL 185
           F R +AG  R+G+  R  GP + PG+++ L
Sbjct: 398 FGRVFAGTVRSGLKVRIQGPNYTPGKKEDL 427

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>CAC1E_RABIT (Q02343) Voltage-dependent R-type calcium channel alpha-1E subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (Brain calcium channel II) (BII)
          Length = 2259

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = -3

Query: 415  LPFSDRRSSRADWQGIR-RSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHRAG 239
            L  +D  S R  +  IR + S+ SWL    +++    +N+Y+  RR          HR  
Sbjct: 1956 LVVTDPGSMRRSFSTIRDKRSSSSWLEEFSMERSS--DNTYKSRRRSYHSSLRLSAHRLN 2013

Query: 238  IDRRQDGPAFQPGRRQRLRYTQR 170
             D        + G R+R R  +R
Sbjct: 2014 SDSGHKSDTHRSGGRERGRSKER 2036

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>LUC7L_HUMAN (Q9NQ29) Putative RNA-binding protein Luc7-like 1 (SR+89) (Putative|
           SR protein LUC7B1)
          Length = 371

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
 Frame = -3

Query: 403 DRRSSRADWQGIRRSSAQSWLRRGFL-----DQHPRH----NNSYRGYRRGIFDRRYAGN 251
           DRR SR+  +  RRS + S  RR        D+H RH     +  RG+RR   DR  +  
Sbjct: 266 DRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDR--SAK 323

Query: 250 HRAGIDRRQDGPAFQPGRRQR 188
           ++   +R     +++ GR +R
Sbjct: 324 YKFSRERASREESWESGRSER 344

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>KCNK4_HUMAN (Q9NYG8) Potassium channel subfamily K member 4 (TWIK-related|
           arachidonic acid-stimulated potassium channel protein)
           (TRAAK) (Two pore K(+) channel KT4.1)
          Length = 393

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -3

Query: 256 GNHRAGIDRRQDGPAFQP 203
           G++ AG D RQD PA+QP
Sbjct: 216 GDYVAGADPRQDSPAYQP 233

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>HSP1_SMIBI (Q9TUC4) Sperm protamine P1|
          Length = 62

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 400 RRSSRADWQGIRRSSAQSWLRRGFLDQHPRHNNSYRGYRRGIFDRRYAGNHR 245
           R  SR+ ++  RR  ++   RR    +  RH+   RG RRG   RRY+   R
Sbjct: 8   RSRSRSRYRRRRRRRSRHHNRRRTYRRSRRHSIRRRGRRRGYSRRRYSRRGR 59

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>ANFD_CLOHU (Q46082) Nitrogenase iron-iron protein alpha chain (EC 1.18.6.1)|
           (Nitrogenase component I) (Dinitrogenase 3 alpha
           subunit)
          Length = 518

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
 Frame = -3

Query: 373 GIRRSSAQSWLRRGFLDQHPRHNNSYRGYR------RGIFDRRYAGNHR-AGIDRRQD-G 218
           G R       +R  +L+ H  HN  Y+G+       R I++  Y+  H+ +GID  +D  
Sbjct: 405 GKRPGEVAKKVRVPYLNAHAYHNGPYKGFEGWVRFARDIYNAIYSPIHQLSGIDITKDNA 464

Query: 217 PAFQPGRRQRLRYTQRSQHDP*LTEATLLVQY 122
           P +  G R R   +  +  D  +  +  L QY
Sbjct: 465 PEWGNGFRTRQMLSDGNLSDA-VRNSETLAQY 495

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>LAMA2_HUMAN (P24043) Laminin alpha-2 chain precursor (Laminin M chain) (Merosin|
           heavy chain)
          Length = 3110

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +1

Query: 166 GFFACTSNVVVCPAEMLDHPASCQCLHDGYQHNVDQRCHG 285
           G   C  +   CP +   + + C+C H+    + DQ C G
Sbjct: 285 GMCICYGHARACPLDPATNKSRCECEHNTCGDSCDQCCPG 324


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,777,299
Number of Sequences: 219361
Number of extensions: 1174150
Number of successful extensions: 3093
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 2910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3090
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result