ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl02d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible l... 285 3e-74
2emb|AJ507212.1|HVU507212 Hordeum vulgare mRNA for lipoxygenase 2... 86 6e-14
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 78 1e-11
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 78 1e-11
5emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 78 1e-11
6emb|AJ270938.1|OSA270938 Oryza sativa mRNA for lipoxygenase (rci... 62 8e-07
7dbj|AK072241.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 8e-07
8dbj|AK066737.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 8e-07
9emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa... 62 8e-07
10ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-04
11ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-04
12gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 54 2e-04
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 2e-04
14emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2... 54 2e-04
15gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual posit... 54 2e-04
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 2e-04
17dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 2e-04
18dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 2e-04
19dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 2e-04
20dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 2e-04
21gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full... 52 8e-04
22gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 52 8e-04
23gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, co... 52 8e-04
24gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-... 52 8e-04
25gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full ... 50 0.003
26gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 geno... 50 0.003
27gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.003
28ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.012
29gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRN... 48 0.012
30emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 48 0.012
31gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 48 0.012
32gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 48 0.012
33dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.012
34gb|AY111869.1| Zea mays CL452_-8 mRNA sequence 48 0.012
35gb|AY103567.1| Zea mays PCO116252 mRNA sequence 48 0.012
36gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partia... 48 0.012
37gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 48 0.012
38ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.19
39dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.19
40dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.19
41dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.19
42dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.19
43ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.77
44ref|NM_182116.2| Caenorhabditis elegans T21B10.2b (enolase) mRNA... 42 0.77
45ref|NM_063499.2| Caenorhabditis elegans T21B10.2a (enolase) mRNA... 42 0.77
46ref|NM_001027178.1| Caenorhabditis elegans T21B10.2c (enolase) m... 42 0.77
47gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 42 0.77
48gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 42 0.77
49emb|Z68318.2|CET21B10 Caenorhabditis elegans Cosmid T21B10, comp... 42 0.77
50gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cd... 40 3.0
51emb|BX546480.9| Zebrafish DNA sequence from clone DKEY-175C11, c... 40 3.0
52gb|AC068359.11| Homo sapiens chromosome 8, clone RP11-468C1, com... 40 3.0
53tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform ... 40 3.0
54gb|AY110522.1| Zea mays CL4677_2 mRNA sequence 40 3.0
55gb|AY104322.1| Zea mays PCO093659 mRNA sequence 40 3.0
56emb|AL732620.14| Mouse DNA sequence from clone RP23-167G19 on ch... 40 3.0
57gb|AC145978.3| Gallus gallus BAC clone CH261-10K7 from chromosom... 40 3.0 
>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA,
            complete cds
          Length = 3054

 Score =  285 bits (144), Expect = 3e-74
 Identities = 156/160 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    tgctcattcccattatacccaccgccgggccaagagactgaagacacttttatttacgcc 60
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3008 tgctcattcccattatacccaccgccgggccaagagactgaagacactcttatttacgcc 2949

                                                                        
Query: 61   tagttgagttacacacccacacacaaggcagctcaaatggagatgctgttggggatgccc 120
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2948 tagttgagttacacacacacacacaaggcagctcaaatggagatgctgttggggatgccc 2889

                                                    
Query: 121  atttccatcaccattttctcgtccgtgggatcaccgtccg 160
            || ||||||||||| |||||||||||||||||||||||||
Sbjct: 2888 atctccatcaccatcttctcgtccgtgggatcaccgtccg 2849



 Score =  192 bits (97), Expect = 3e-46
 Identities = 97/97 (100%)
 Strand = Plus / Minus

                                                                        
Query: 140  cgtccgtgggatcaccgtccgacggcctgagcagcacatacggcaccatgccggcgccgt 199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2854 cgtccgtgggatcaccgtccgacggcctgagcagcacatacggcaccatgccggcgccgt 2795

                                                 
Query: 200  gtcggtttttccggtcggggtcgttgttccactcatc 236
            |||||||||||||||||||||||||||||||||||||
Sbjct: 2794 gtcggtttttccggtcggggtcgttgttccactcatc 2758
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>emb|AJ507212.1|HVU507212 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:2 gene)
          Length = 3023

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 115/139 (82%)
 Strand = Plus / Minus

                                                                        
Query: 95   aaatggagatgctgttggggatgcccatttccatcaccattttctcgtccgtgggatcac 154
            ||||||| |||||||| || |||||||| ||||||||| ||||  ||||| | |||| ||
Sbjct: 2892 aaatggaaatgctgttcggaatgcccatctccatcaccgttttagcgtccatcggattac 2833

                                                                        
Query: 155  cgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtttttccggt 214
            ||| | | |||||||||||||| |||||||| | |||||| ||||| |||||| ||||| 
Sbjct: 2832 cgttcaatggcctgagcagcacgtacggcactacgccggcaccgtggcggtttctccggc 2773

                               
Query: 215  cggggtcgttgttccactc 233
             |  ||| |||||||||||
Sbjct: 2772 tgtcgtccttgttccactc 2754
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                           
Query: 90       agctcaaatggagatgctgttggggatgcccatttccatcacc 132
                ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 22970463 agctcaaatggagatgctgttggggatgcccatctccatcacc 22970421



 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 94/115 (81%)
 Strand = Plus / Plus

                                                                            
Query: 92       ctcaaatggagatgctgttggggatgcccatttccatcaccattttctcgtccgtgggat 151
                ||||||| ||||||||||||||||| ||||| ||||||||     ||  |||| | || |
Sbjct: 22888635 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 22888694

                                                                       
Query: 152      caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 206
                ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 22888695 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 22888749
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                           
Query: 90       agctcaaatggagatgctgttggggatgcccatttccatcacc 132
                ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 22898654 agctcaaatggagatgctgttggggatgcccatctccatcacc 22898612



 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 94/115 (81%)
 Strand = Plus / Plus

                                                                            
Query: 92       ctcaaatggagatgctgttggggatgcccatttccatcaccattttctcgtccgtgggat 151
                ||||||| ||||||||||||||||| ||||| ||||||||     ||  |||| | || |
Sbjct: 22816826 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 22816885

                                                                       
Query: 152      caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 206
                ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 22816886 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 22816940
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>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155568

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 42/43 (97%)
 Strand = Plus / Minus

                                                        
Query: 90    agctcaaatggagatgctgttggggatgcccatttccatcacc 132
             ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 79740 agctcaaatggagatgctgttggggatgcccatctccatcacc 79698
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>emb|AJ270938.1|OSA270938 Oryza sativa mRNA for lipoxygenase (rci-1 gene)
          Length = 3018

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 94/115 (81%)
 Strand = Plus / Minus

                                                                        
Query: 92   ctcaaatggagatgctgttggggatgcccatttccatcaccattttctcgtccgtgggat 151
            ||||||| ||||||||||||||||| ||||| ||||||||     ||  |||| | || |
Sbjct: 2817 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 2758

                                                                   
Query: 152  caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 206
            ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 2757 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 2703
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>dbj|AK072241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002P20, full
            insert sequence
          Length = 3080

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 94/115 (81%)
 Strand = Plus / Minus

                                                                        
Query: 92   ctcaaatggagatgctgttggggatgcccatttccatcaccattttctcgtccgtgggat 151
            ||||||| ||||||||||||||||| ||||| ||||||||     ||  |||| | || |
Sbjct: 2836 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 2777

                                                                   
Query: 152  caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 206
            ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 2776 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 2722
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>dbj|AK066737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079G10, full
            insert sequence
          Length = 2747

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 94/115 (81%)
 Strand = Plus / Minus

                                                                        
Query: 92   ctcaaatggagatgctgttggggatgcccatttccatcaccattttctcgtccgtgggat 151
            ||||||| ||||||||||||||||| ||||| ||||||||     ||  |||| | || |
Sbjct: 2343 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 2284

                                                                   
Query: 152  caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 206
            ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 2283 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 2229
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>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 148705

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 94/115 (81%)
 Strand = Plus / Minus

                                                                         
Query: 92    ctcaaatggagatgctgttggggatgcccatttccatcaccattttctcgtccgtgggat 151
             ||||||| ||||||||||||||||| ||||| ||||||||     ||  |||| | || |
Sbjct: 68209 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 68150

                                                                    
Query: 152   caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 206
             ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 68149 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 68095
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>ref|XM_469412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2686

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 92   ctcaaatggagatgctgttggggatgcccat 122
            |||| ||||||||||||||||||||||||||
Sbjct: 2447 ctcagatggagatgctgttggggatgcccat 2417
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>ref|XM_469411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3165

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 92   ctcaaatggagatgctgttggggatgcccat 122
            |||| ||||||||||||||||||||||||||
Sbjct: 2926 ctcagatggagatgctgttggggatgcccat 2896
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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 92    ctcaaatggagatgctgttggggatgcccat 122
             |||| ||||||||||||||||||||||||||
Sbjct: 65817 ctcagatggagatgctgttggggatgcccat 65787



 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 100   gagatgctgttggggatgccc 120
             |||||||||||||||||||||
Sbjct: 47230 gagatgctgttggggatgccc 47210
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 92       ctcaaatggagatgctgttggggatgcccat 122
                |||| ||||||||||||||||||||||||||
Sbjct: 27821687 ctcagatggagatgctgttggggatgcccat 27821657



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 92       ctcaaatggagatgctgttggggatgccc 120
                ||||||||| |||||||||||||||||||
Sbjct: 14300017 ctcaaatggtgatgctgttggggatgccc 14300045



 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 97       atggagatgctgttggggatgccc 120
                ||||||||||||||||||||||||
Sbjct: 30026445 atggagatgctgttggggatgccc 30026422



 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 100      gagatgctgttggggatgccc 120
                |||||||||||||||||||||
Sbjct: 27803100 gagatgctgttggggatgccc 27803080
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>emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:3 gene)
          Length = 2967

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 93   tcaaatggagatgctgttggggatgcc 119
            |||||||||||||||||||||||||||
Sbjct: 2774 tcaaatggagatgctgttggggatgcc 2748



 Score = 42.1 bits (21), Expect = 0.77
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 161  acggcctgagcagcacatacggcaccatgccggcgcc 197
            ||||| |||||||| | |||||||| |||||||||||
Sbjct: 2721 acggcttgagcagctcgtacggcacgatgccggcgcc 2685
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>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity
            lipoxygenase mRNA, complete cds
          Length = 3154

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 92   ctcaaatggagatgctgttggggatgcccat 122
            |||| ||||||||||||||||||||||||||
Sbjct: 2920 ctcagatggagatgctgttggggatgcccat 2890
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 92       ctcaaatggagatgctgttggggatgcccat 122
                |||| ||||||||||||||||||||||||||
Sbjct: 27913011 ctcagatggagatgctgttggggatgcccat 27912981



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 92       ctcaaatggagatgctgttggggatgccc 120
                ||||||||| |||||||||||||||||||
Sbjct: 14294992 ctcaaatggtgatgctgttggggatgccc 14295020



 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 97       atggagatgctgttggggatgccc 120
                ||||||||||||||||||||||||
Sbjct: 30117867 atggagatgctgttggggatgccc 30117844



 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 100      gagatgctgttggggatgccc 120
                |||||||||||||||||||||
Sbjct: 27894424 gagatgctgttggggatgccc 27894404
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>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full
            insert sequence
          Length = 1560

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 92   ctcaaatggagatgctgttggggatgcccat 122
            |||| ||||||||||||||||||||||||||
Sbjct: 1333 ctcagatggagatgctgttggggatgcccat 1303
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>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full
            insert sequence
          Length = 2851

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 92   ctcaaatggagatgctgttggggatgcccat 122
            |||| ||||||||||||||||||||||||||
Sbjct: 2598 ctcagatggagatgctgttggggatgcccat 2568
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>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full
            insert sequence
          Length = 3167

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 92   ctcaaatggagatgctgttggggatgcccat 122
            |||| ||||||||||||||||||||||||||
Sbjct: 2928 ctcagatggagatgctgttggggatgcccat 2898
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>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full
            insert sequence
          Length = 1726

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 92   ctcaaatggagatgctgttggggatgcccat 122
            |||| ||||||||||||||||||||||||||
Sbjct: 1498 ctcagatggagatgctgttggggatgcccat 1468
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>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA
           sequence
          Length = 1020

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 91  gctcaaatggagatgctgttggggatgccc 120
           ||||| ||||||||||||||||||||||||
Sbjct: 755 gctcagatggagatgctgttggggatgccc 726
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>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 91   gctcaaatggagatgctgttggggatgccc 120
            ||||| ||||||||||||||||||||||||
Sbjct: 4664 gctcagatggagatgctgttggggatgccc 4635
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>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds
          Length = 3003

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 89   cagctcaaatggagatgctgttggggatgcccat 122
            ||||||| ||||||| ||||||||||||||||||
Sbjct: 2768 cagctcagatggagacgctgttggggatgcccat 2735
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>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds
          Length = 2267

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 91   gctcaaatggagatgctgttggggatgccc 120
            ||||| ||||||||||||||||||||||||
Sbjct: 2066 gctcagatggagatgctgttggggatgccc 2037
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>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA
           sequence
          Length = 1129

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 92  ctcaaatggagatgctgttggggatgccc 120
           |||| ||||||||||||||||||||||||
Sbjct: 907 ctcagatggagatgctgttggggatgccc 879
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>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
             sequence
          Length = 158714

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 92    ctcaaatggagatgctgttggggatgccc 120
             ||||||||| |||||||||||||||||||
Sbjct: 49246 ctcaaatggtgatgctgttggggatgccc 49274
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>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18,
              complete sequence
          Length = 122159

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 92     ctcaaatggagatgctgttggggatgccc 120
              ||||||||| |||||||||||||||||||
Sbjct: 111405 ctcaaatggtgatgctgttggggatgccc 111433
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>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 97   atggagatgctgttggggatgccc 120
            ||||||||||||||||||||||||
Sbjct: 2609 atggagatgctgttggggatgccc 2586
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>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds
          Length = 1331

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 97   atggagatgctgttggggatgccc 120
            ||||||||||||||||||||||||
Sbjct: 1082 atggagatgctgttggggatgccc 1059
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>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 97   atggagatgctgttggggatgccc 120
            ||||||||||||||||||||||||
Sbjct: 2691 atggagatgctgttggggatgccc 2668
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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 97    atggagatgctgttggggatgccc 120
             ||||||||||||||||||||||||
Sbjct: 81306 atggagatgctgttggggatgccc 81329
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>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 97   atggagatgctgttggggatgccc 120
            ||||||||||||||||||||||||
Sbjct: 2591 atggagatgctgttggggatgccc 2568
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>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
            insert sequence
          Length = 2928

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 97   atggagatgctgttggggatgccc 120
            ||||||||||||||||||||||||
Sbjct: 2724 atggagatgctgttggggatgccc 2701
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>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence
          Length = 568

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 91  gctcaaatggagatgctgttggggatgcccat 122
           ||||| ||||||||||||||||| ||||||||
Sbjct: 369 gctcatatggagatgctgttgggaatgcccat 338
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>gb|AY103567.1| Zea mays PCO116252 mRNA sequence
          Length = 3135

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 91   gctcaaatggagatgctgttggggatgcccat 122
            ||||| ||||||||||||||||| ||||||||
Sbjct: 2902 gctcatatggagatgctgttgggaatgcccat 2871
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>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds
          Length = 1814

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 97   atggagatgctgttggggatgccc 120
            ||||||||||||||||||||||||
Sbjct: 1552 atggagatgctgttggggatgccc 1529
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>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 97   atggagatgctgttggggatgccc 120
            ||||||||||||||||||||||||
Sbjct: 2653 atggagatgctgttggggatgccc 2630
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>ref|XM_464447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3123

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 161  acggcctgagcagcacatacggcaccatgccggcgccg 198
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 2828 acggcttgagcagctcgtacggcacgatgccggcgccg 2791



 Score = 42.1 bits (21), Expect = 0.77
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 92   ctcaaatggagatgctgttggggatgccc 120
            |||| |||||||||||||| |||||||||
Sbjct: 2882 ctcagatggagatgctgtttgggatgccc 2854
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 161     acggcctgagcagcacatacggcaccatgccggcgccg 198
               ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 5277016 acggcttgagcagctcgtacggcacgatgccggcgccg 5277053



 Score = 42.1 bits (21), Expect = 0.77
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 92      ctcaaatggagatgctgttggggatgccc 120
               |||| |||||||||||||| |||||||||
Sbjct: 5276962 ctcagatggagatgctgtttgggatgccc 5276990
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>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1225_F07
          Length = 142772

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 161  acggcctgagcagcacatacggcaccatgccggcgccg 198
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 3319 acggcttgagcagctcgtacggcacgatgccggcgccg 3356



 Score = 42.1 bits (21), Expect = 0.77
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 92   ctcaaatggagatgctgttggggatgccc 120
            |||| |||||||||||||| |||||||||
Sbjct: 3265 ctcagatggagatgctgtttgggatgccc 3293
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>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full
            insert sequence
          Length = 3160

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 161  acggcctgagcagcacatacggcaccatgccggcgccg 198
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 2827 acggcttgagcagctcgtacggcacgatgccggcgccg 2790



 Score = 42.1 bits (21), Expect = 0.77
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 92   ctcaaatggagatgctgttggggatgccc 120
            |||| |||||||||||||| |||||||||
Sbjct: 2881 ctcagatggagatgctgtttgggatgccc 2853
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>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full
            insert sequence
          Length = 2250

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 161  acggcctgagcagcacatacggcaccatgccggcgccg 198
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 1989 acggcttgagcagctcgtacggcacgatgccggcgccg 1952



 Score = 42.1 bits (21), Expect = 0.77
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 92   ctcaaatggagatgctgttggggatgccc 120
            |||| |||||||||||||| |||||||||
Sbjct: 2043 ctcagatggagatgctgtttgggatgccc 2015
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>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 100  gagatgctgttggggatgccc 120
            |||||||||||||||||||||
Sbjct: 2594 gagatgctgttggggatgccc 2574
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>ref|NM_182116.2| Caenorhabditis elegans T21B10.2b (enolase) mRNA, complete cds
          Length = 1015

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 33  agagactgaagacacttttat 53
           |||||||||||||||||||||
Sbjct: 835 agagactgaagacacttttat 855
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>ref|NM_063499.2| Caenorhabditis elegans T21B10.2a (enolase) mRNA, complete cds
          Length = 1316

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 33   agagactgaagacacttttat 53
            |||||||||||||||||||||
Sbjct: 1136 agagactgaagacacttttat 1156
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>ref|NM_001027178.1| Caenorhabditis elegans T21B10.2c (enolase) mRNA, complete cds
          Length = 1603

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 33   agagactgaagacacttttat 53
            |||||||||||||||||||||
Sbjct: 1236 agagactgaagacacttttat 1256
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>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 100   gagatgctgttggggatgccc 120
             |||||||||||||||||||||
Sbjct: 10793 gagatgctgttggggatgccc 10813
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>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 92   ctcaaatggagatgctgttggggatgccc 120
            ||||||||||||||||||| || ||||||
Sbjct: 2623 ctcaaatggagatgctgtttggaatgccc 2595
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>emb|Z68318.2|CET21B10 Caenorhabditis elegans Cosmid T21B10, complete sequence
          Length = 31801

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 33   agagactgaagacacttttat 53
            |||||||||||||||||||||
Sbjct: 4846 agagactgaagacacttttat 4866
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>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced
          Length = 1285452

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 69      ttacacacccacacacaaggcagc 92
               ||||||| ||||||||||||||||
Sbjct: 1028232 ttacacagccacacacaaggcagc 1028255
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>emb|BX546480.9| Zebrafish DNA sequence from clone DKEY-175C11, complete sequence
          Length = 203056

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 71     acacacccacacacaaggcagctc 94
              |||||| |||||||||||||||||
Sbjct: 169305 acacacacacacacaaggcagctc 169328
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>gb|AC068359.11| Homo sapiens chromosome 8, clone RP11-468C1, complete sequence
          Length = 186457

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    ttacacacccacacacaaggcagc 92
             ||||||| ||||||||||||||||
Sbjct: 92802 ttacacagccacacacaaggcagc 92825
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>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively
               spliced, complete cds
          Length = 1421559

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 69      ttacacacccacacacaaggcagc 92
               ||||||| ||||||||||||||||
Sbjct: 1028232 ttacacagccacacacaaggcagc 1028255
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>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence
          Length = 1304

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 97  atggagatgctgttggggatgccc 120
           |||||||||||| |||||||||||
Sbjct: 138 atggagatgctgctggggatgccc 161
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>gb|AY104322.1| Zea mays PCO093659 mRNA sequence
          Length = 1439

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 97   atggagatgctgttggggatgccc 120
            |||||||||||| |||||||||||
Sbjct: 1210 atggagatgctgctggggatgccc 1187
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>emb|AL732620.14| Mouse DNA sequence from clone RP23-167G19 on chromosome 2, complete
              sequence
          Length = 230116

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 58     gcctagttgagttacacacccacacaca 85
              ||||| ||||||||||||| ||||||||
Sbjct: 212947 gcctacttgagttacacacacacacaca 212920
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>gb|AC145978.3| Gallus gallus BAC clone CH261-10K7 from chromosome unknown, complete
              sequence
          Length = 216402

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 106    ctgttggggatgcccatttccatc 129
              ||||||||||||| ||||||||||
Sbjct: 215578 ctgttggggatgcacatttccatc 215555


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,817,095
Number of Sequences: 3902068
Number of extensions: 1817095
Number of successful extensions: 53392
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53189
Number of HSP's gapped (non-prelim): 203
length of query: 236
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 214
effective length of database: 17,147,199,772
effective search space: 3669500751208
effective search space used: 3669500751208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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