ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl02c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MUC1_HUMAN (P15941) Mucin-1 precursor (MUC-1) (Polymorphic epith... 29 3.8
2KAIN_PONPY (Q5RCR2) Kallistatin precursor (Serpin A4) 28 5.0
3KAIN_HUMAN (P29622) Kallistatin precursor (Serpin A4) (Kallikrei... 28 5.0

>MUC1_HUMAN (P15941) Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin)|
           (PEM) (PEMT) (Episialin) (Tumor-associated mucin)
           (Carcinoma-associated mucin) (Tumor-associated
           epithelial membrane antigen) (EMA) (H23AG)
           (Peanut-reactive urinary mucin) (PUM)
          Length = 1255

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 86  RDIITVAVTRLAGFKRSPQHSKATTAADNKPLAGFNRSP 202
           +D+ +V VTR A    +P     T+A DNKP  G    P
Sbjct: 96  QDVTSVPVTRPALGSTTPPAHDVTSAPDNKPAPGSTAPP 134



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>KAIN_PONPY (Q5RCR2) Kallistatin precursor (Serpin A4)|
          Length = 427

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 2   NIIGFGVRTRVGANLF*HHKLAFSHGIQRDIITVAVTRL 118
           N+ G G+ TRVG+ LF  H L F      D +T    +L
Sbjct: 129 NLPGHGLETRVGSALFLSHNLKFLAKFLNDTMTFYEAKL 167



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>KAIN_HUMAN (P29622) Kallistatin precursor (Serpin A4) (Kallikrein inhibitor)|
           (Protease inhibitor 4)
          Length = 427

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 2   NIIGFGVRTRVGANLF*HHKLAFSHGIQRDIITVAVTRL 118
           N+ G G+ TRVG+ LF  H L F      D + V   +L
Sbjct: 129 NLPGHGLETRVGSALFLSHNLKFLAKFLNDTMAVYEAKL 167


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,996,563
Number of Sequences: 219361
Number of extensions: 379208
Number of successful extensions: 844
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 80,573,946
effective HSP length: 44
effective length of database: 70,922,062
effective search space used: 1702129488
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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