Clone Name | rbastl02c07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | DNJ5G_HUMAN (Q8N7S2) DnaJ homolog subfamily C member 5G (Gamma c... | 31 | 1.0 | 2 | YTNL_BACSU (O34980) Hypothetical protein ytnL | 29 | 5.2 |
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>DNJ5G_HUMAN (Q8N7S2) DnaJ homolog subfamily C member 5G (Gamma cysteine string| protein) (Gamma-CSP) Length = 189 Score = 31.2 bits (69), Expect = 1.0 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -1 Query: 107 CWGKALPFLCMMMTLCTFTLCVSF 36 CW K L LC ++T C F C F Sbjct: 122 CWFKTLVILCTLLTCCCFCCCCCF 145
>YTNL_BACSU (O34980) Hypothetical protein ytnL| Length = 416 Score = 28.9 bits (63), Expect = 5.2 Identities = 18/50 (36%), Positives = 19/50 (38%) Frame = -1 Query: 389 APSTAGHDDDQSWRAAFKSXXXXXXXXXXLVGSFATTGDDGDHSWRADVF 240 APSTAG D + GSFA G DGDH W F Sbjct: 349 APSTAGED--------------FAYYLEHIPGSFAFFGTDGDHDWHHPAF 384 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,514,789 Number of Sequences: 219361 Number of extensions: 694730 Number of successful extensions: 1657 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1637 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1657 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)