ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl02c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genom... 54 4e-04
2gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genom... 54 4e-04
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 4e-04
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
5dbj|AK121995.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
6gb|AC137065.26| Medicago truncatula clone mth2-29h7, complete se... 44 0.36
7gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
8gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
9emb|CR962134.2| Medicago truncatula chromosome 5 clone mte1-40n1... 42 1.4
10gb|DQ458594.1| Pseudomonas sp. P97.6 DNA gyrase subunit B (gyrB)... 42 1.4
11gb|DQ458582.1| Pseudomonas sp. P97.38 DNA gyrase subunit B (gyrB... 42 1.4
12gb|AC091666.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
13emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
14emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
15gb|AC155255.3| Mus musculus BAC clone RP24-143P3 from chromosome... 42 1.4
16gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
18dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
19dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
20gb|AC130460.2| Homo sapiens chromosome 16 clone CTA-485G10, comp... 42 1.4
21gb|AC084797.5| Homo sapiens chromosome 16 clone RP11-62O3, compl... 42 1.4
22emb|BX005342.14| Zebrafish DNA sequence from clone DKEY-81P7, co... 42 1.4
23dbj|AK100418.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
24emb|CR352257.8| Zebrafish DNA sequence from clone CH211-261B21 i... 42 1.4
25gb|AY449459.1| Oikopleura dioica clone BACOIKO003 5xk14, complet... 42 1.4
26gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
27gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
28dbj|AB039466.1| Pseudomonas corrugata gyrB gene for DNA gyrase s... 42 1.4
29ref|XM_468111.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.6
30gb|AC133861.5| Oryza sativa chromosome 3 BAC OSJNBb0031F05 genom... 40 5.6
31ref|XM_742381.1| Aspergillus fumigatus Af293 integral membrane p... 40 5.6
32emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 5.6
33ref|XM_808343.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.6
34gb|BC039504.2| Homo sapiens cDNA clone IMAGE:5561426, partial cds 40 5.6
35emb|AL731897.12| Human DNA sequence from clone RP11-284G10 on ch... 40 5.6
36emb|AL160152.20| Human DNA sequence from clone RP11-360H15 on ch... 40 5.6
37gb|AY245373.1| Iris fulva clone FR3-6 IRRE retrotransposon, part... 40 5.6
38gb|AC027118.9| Homo sapiens chromosome 10 clone RP11-573I11, com... 40 5.6
39dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
40dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
41dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
42dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
43dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
44dbj|AP006048.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
45dbj|AP005967.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
46dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
47dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
48dbj|AP006210.1| Homo sapiens genomic DNA, chromosome 9, clone:RP... 40 5.6
49dbj|AB020873.1| Homo sapiens genomic DNA of 9q32 anti-oncogene o... 40 5.6 
>gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genomic sequence,
           complete sequence
          Length = 132292

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 169 gtttcctaattgtcaaccaggctcagttgac 199
           ||||||||||||||||||||||||| |||||
Sbjct: 309 gtttcctaattgtcaaccaggctcaattgac 339
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>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete
              sequence
          Length = 190055

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                             
Query: 169    gtttcctaattgtcaaccaggctcagttgac 199
              ||||||||||||||||||||||||| |||||
Sbjct: 188326 gtttcctaattgtcaaccaggctcaattgac 188356
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 169      gtttcctaattgtcaaccaggctcagttgac 199
                ||||||||||||||||||||||||| |||||
Sbjct: 21495415 gtttcctaattgtcaaccaggctcaattgac 21495445



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ggcggtggacggagcatggg 394
                ||||||||||||||||||||
Sbjct: 18037513 ggcggtggacggagcatggg 18037532
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 169      gtttcctaattgtcaaccaggctcagttgac 199
                ||||||||||||||||||||||||| |||||
Sbjct: 21488444 gtttcctaattgtcaaccaggctcaattgac 21488474



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ggcggtggacggagcatggg 394
                ||||||||||||||||||||
Sbjct: 18031054 ggcggtggacggagcatggg 18031073
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>dbj|AK121995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110A05, full
            insert sequence
          Length = 3726

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 169  gtttcctaattgtcaaccaggctcagttgac 199
            ||||||||||||||||||||||||| |||||
Sbjct: 3555 gtttcctaattgtcaaccaggctcaattgac 3525
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>gb|AC137065.26| Medicago truncatula clone mth2-29h7, complete sequence
          Length = 105004

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 116   tgaatcatcatagacatgtataaaaatcaa 145
             |||||||||||  |||||||||||||||||
Sbjct: 75058 tgaatcatcatttacatgtataaaaatcaa 75029
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>gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0023F12, complete sequence
          Length = 147801

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 361   tcgtcgtcgtggccggcggtg 381
             |||||||||||||||||||||
Sbjct: 38066 tcgtcgtcgtggccggcggtg 38086
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>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02,
              complete sequence
          Length = 143438

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 361    tcgtcgtcgtggccggcggtg 381
              |||||||||||||||||||||
Sbjct: 138601 tcgtcgtcgtggccggcggtg 138621
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>emb|CR962134.2| Medicago truncatula chromosome 5 clone mte1-40n1, COMPLETE SEQUENCE
          Length = 139651

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 218   aagcaatttagactttagagg 238
             |||||||||||||||||||||
Sbjct: 60799 aagcaatttagactttagagg 60779
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>gb|DQ458594.1| Pseudomonas sp. P97.6 DNA gyrase subunit B (gyrB) gene, partial cds
          Length = 545

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 269 cgtcgtcgccggtggtggcaa 289
           |||||||||||||||||||||
Sbjct: 162 cgtcgtcgccggtggtggcaa 182
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>gb|DQ458582.1| Pseudomonas sp. P97.38 DNA gyrase subunit B (gyrB) gene, partial
           cds
          Length = 539

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 269 cgtcgtcgccggtggtggcaa 289
           |||||||||||||||||||||
Sbjct: 156 cgtcgtcgccggtggtggcaa 176
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>gb|AC091666.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0078C13, complete sequence
          Length = 140553

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 369   gtggccggcggtggacggagc 389
             |||||||||||||||||||||
Sbjct: 44662 gtggccggcggtggacggagc 44642
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>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01,
            complete sequence
          Length = 153643

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 361  tcgtcgtcgtggccggcggtggacggagc 389
            ||||||||||||||||||| ||| |||||
Sbjct: 3357 tcgtcgtcgtggccggcggcggagggagc 3329
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>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13,
              complete sequence
          Length = 123480

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 361    tcgtcgtcgtggccggcggtggacggagc 389
              ||||||||||||||||||| ||| |||||
Sbjct: 101424 tcgtcgtcgtggccggcggcggagggagc 101396
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>gb|AC155255.3| Mus musculus BAC clone RP24-143P3 from chromosome 12, complete sequence
          Length = 201217

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 184   accaggctcagttgacttact 204
             |||||||||||||||||||||
Sbjct: 56586 accaggctcagttgacttact 56566
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>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
            OSJNAb0078C13, complete sequence
          Length = 146538

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 369  gtggccggcggtggacggagc 389
            |||||||||||||||||||||
Sbjct: 6052 gtggccggcggtggacggagc 6072
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 361      tcgtcgtcgtggccggcggtggacggagc 389
                ||||||||||||||||||| ||| |||||
Sbjct: 32484623 tcgtcgtcgtggccggcggcggagggagc 32484595
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 361      tcgtcgtcgtggccggcggtg 381
                |||||||||||||||||||||
Sbjct: 17628453 tcgtcgtcgtggccggcggtg 17628473
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 369     gtggccggcggtggacggagc 389
               |||||||||||||||||||||
Sbjct: 9989293 gtggccggcggtggacggagc 9989313
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>gb|AC130460.2| Homo sapiens chromosome 16 clone CTA-485G10, complete sequence
          Length = 135347

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 131   atgtataaaaatcaagaaata 151
             |||||||||||||||||||||
Sbjct: 14596 atgtataaaaatcaagaaata 14616
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>gb|AC084797.5| Homo sapiens chromosome 16 clone RP11-62O3, complete sequence
          Length = 163855

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 131    atgtataaaaatcaagaaata 151
              |||||||||||||||||||||
Sbjct: 145343 atgtataaaaatcaagaaata 145363
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>emb|BX005342.14| Zebrafish DNA sequence from clone DKEY-81P7, complete sequence
          Length = 257502

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 80    ataaaaaaggcaaagctttgcccca 104
             |||||||||||||||||||| ||||
Sbjct: 23011 ataaaaaaggcaaagctttgtccca 23035
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>dbj|AK100418.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088A15, full
           insert sequence
          Length = 1282

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 361 tcgtcgtcgtggccggcggtggacggagc 389
           ||||||||||||||||||| ||| |||||
Sbjct: 189 tcgtcgtcgtggccggcggcggagggagc 161
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>emb|CR352257.8| Zebrafish DNA sequence from clone CH211-261B21 in linkage group 7,
              complete sequence
          Length = 159979

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 202    actcaagcaatcattcaagca 222
              |||||||||||||||||||||
Sbjct: 121315 actcaagcaatcattcaagca 121335
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>gb|AY449459.1| Oikopleura dioica clone BACOIKO003 5xk14, complete sequence
          Length = 158922

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 223   atttagactttagaggcaaac 243
             |||||||||||||||||||||
Sbjct: 37866 atttagactttagaggcaaac 37846
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 369     gtggccggcggtggacggagc 389
               |||||||||||||||||||||
Sbjct: 9995332 gtggccggcggtggacggagc 9995352
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 361      tcgtcgtcgtggccggcggtg 381
                |||||||||||||||||||||
Sbjct: 17723184 tcgtcgtcgtggccggcggtg 17723204
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>dbj|AB039466.1| Pseudomonas corrugata gyrB gene for DNA gyrase subunit B, partial
           cds, strain:NCPPB 3316
          Length = 890

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 269 cgtcgtcgccggtggtggcaa 289
           |||||||||||||||||||||
Sbjct: 606 cgtcgtcgccggtggtggcaa 586
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>ref|XM_468111.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 633

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 264 gtcaccgtcgtcgccggtggtggc 287
           |||| |||||||||||||||||||
Sbjct: 3   gtcatcgtcgtcgccggtggtggc 26
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>gb|AC133861.5| Oryza sativa chromosome 3 BAC OSJNBb0031F05 genomic sequence, complete
             sequence
          Length = 131589

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ggcggtggacggagcatggg 394
             ||||||||||||||||||||
Sbjct: 78688 ggcggtggacggagcatggg 78669
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>ref|XM_742381.1| Aspergillus fumigatus Af293 integral membrane protein (Afu8g06760)
           partial mRNA
          Length = 1542

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 284 tggcaaaggagccgacgagt 303
           ||||||||||||||||||||
Sbjct: 346 tggcaaaggagccgacgagt 327
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 389    catgggcatgagcatcctcgccgc 412
              |||||||||| |||||||||||||
Sbjct: 242094 catgggcatgggcatcctcgccgc 242071
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>ref|XM_808343.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053503999.30) partial mRNA
          Length = 4143

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 266 caccgtcgtcgccggtggtggcaa 289
           |||||||||||| |||||||||||
Sbjct: 102 caccgtcgtcgctggtggtggcaa 79
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>gb|BC039504.2| Homo sapiens cDNA clone IMAGE:5561426, partial cds
          Length = 1125

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  gtacaaagtgtcatcatcat 77
           ||||||||||||||||||||
Sbjct: 807 gtacaaagtgtcatcatcat 826
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>emb|AL731897.12| Human DNA sequence from clone RP11-284G10 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 125196

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   agactttagaggcaaacaca 246
             ||||||||||||||||||||
Sbjct: 68771 agactttagaggcaaacaca 68790
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>emb|AL160152.20| Human DNA sequence from clone RP11-360H15 on chromosome 13, complete
              sequence
          Length = 175151

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     cataaaaaaggcaaagcttt 98
              ||||||||||||||||||||
Sbjct: 119286 cataaaaaaggcaaagcttt 119267
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>gb|AY245373.1| Iris fulva clone FR3-6 IRRE retrotransposon, partial sequence
          Length = 5132

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 209  caatcattcaagcaatttag 228
            ||||||||||||||||||||
Sbjct: 3847 caatcattcaagcaatttag 3828
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>gb|AC027118.9| Homo sapiens chromosome 10 clone RP11-573I11, complete sequence
          Length = 170255

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     gtacaaagtgtcatcatcat 77
              ||||||||||||||||||||
Sbjct: 149740 gtacaaagtgtcatcatcat 149721
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 269     cgtcgtcgccggtggtggca 288
               ||||||||||||||||||||
Sbjct: 6323613 cgtcgtcgccggtggtggca 6323594
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 21       catagtaaagccatcaaatg 40
                ||||||||||||||||||||
Sbjct: 20551156 catagtaaagccatcaaatg 20551175



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 364      tcgtcgtggccggcggtgga 383
                ||||||||||||||||||||
Sbjct: 17007700 tcgtcgtggccggcggtgga 17007719
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 264      gtcaccgtcgtcgccggtggtggc 287
                |||| |||||||||||||||||||
Sbjct: 33126868 gtcatcgtcgtcgccggtggtggc 33126845



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 371      ggccggcggtggacggagca 390
                ||||||||||||||||||||
Sbjct: 29739016 ggccggcggtggacggagca 29738997
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>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1191_G08
          Length = 172832

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    ggccggcggtggacggagca 390
              ||||||||||||||||||||
Sbjct: 107995 ggccggcggtggacggagca 107976
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>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0659D09
          Length = 168253

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     catagtaaagccatcaaatg 40
              ||||||||||||||||||||
Sbjct: 123451 catagtaaagccatcaaatg 123470
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>dbj|AP006048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1423D04
          Length = 154474

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 364    tcgtcgtggccggcggtgga 383
              ||||||||||||||||||||
Sbjct: 140722 tcgtcgtggccggcggtgga 140741
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>dbj|AP005967.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:B1089G05
          Length = 161420

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 364  tcgtcgtggccggcggtgga 383
            ||||||||||||||||||||
Sbjct: 8552 tcgtcgtggccggcggtgga 8571
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>dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1116_C08
          Length = 102317

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   cgtcgtcgccggtggtggca 288
             ||||||||||||||||||||
Sbjct: 74173 cgtcgtcgccggtggtggca 74154
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>dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1369_G08
          Length = 104190

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 264   gtcaccgtcgtcgccggtggtggc 287
             |||| |||||||||||||||||||
Sbjct: 42528 gtcatcgtcgtcgccggtggtggc 42505
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>dbj|AP006210.1| Homo sapiens genomic DNA, chromosome 9, clone:RP11-449F3, complete
              sequence
          Length = 165755

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    agactttagaggcaaacaca 246
              ||||||||||||||||||||
Sbjct: 144569 agactttagaggcaaacaca 144588
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>dbj|AB020873.1| Homo sapiens genomic DNA of 9q32 anti-oncogene of flat epitherium
             cancer , segment 5/10
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   agactttagaggcaaacaca 246
             ||||||||||||||||||||
Sbjct: 92349 agactttagaggcaaacaca 92368


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,007,423
Number of Sequences: 3902068
Number of extensions: 4007423
Number of successful extensions: 74115
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73330
Number of HSP's gapped (non-prelim): 785
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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