Clone Name | rbastl02c04 |
---|---|
Clone Library Name | barley_pub |
>GAT5B_XENLA (P43696) GATA-binding factor 5-B (Transcription factor xGATA-5B)| Length = 388 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -1 Query: 371 ESHMEKTKAPMTPNVLSLGKKPPVGEGAAGKGG 273 ESH +P TP+ S PPVG +A GG Sbjct: 73 ESHAFNASSPHTPSGFSYSHSPPVGNSSARDGG 105
>H1_TIGCA (P35060) Histone H1| Length = 181 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/56 (30%), Positives = 26/56 (46%) Frame = -1 Query: 452 EKPFILSGNGAGQNGQTKVSDSAGFRRESHMEKTKAPMTPNVLSLGKKPPVGEGAA 285 EK ++ GAG +G K++ +A + + K K TP + K P GE A Sbjct: 74 EKKKLVQTKGAGASGSFKLAAAAKAEKPKAVAKPKKAKTPKKKAAATKKPTGEKKA 129
>GAT5A_XENLA (P43695) GATA-binding factor 5-A (Transcription factor xGATA-5A)| Length = 390 Score = 30.8 bits (68), Expect = 1.7 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = -1 Query: 371 ESHMEKTKAPMTPNVLSLGKKPPVGEGAAGKGG 273 ESH +P TP S PPVG +A GG Sbjct: 72 ESHAFNASSPHTPTGFSYSHSPPVGNSSARDGG 104
>FHAB_BORPE (P12255) Filamentous hemagglutinin| Length = 3590 Score = 30.8 bits (68), Expect = 1.7 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +1 Query: 31 ITAAMAVQYFQDYLQFSLTANTN*CSHSKGDWKNRNTVERMHHLLD 168 + A++YF+ L SLTA N S W ++T E + +LLD Sbjct: 1907 VRTVSAMEYFKTPLPVSLTALDNRAGLSPATWNFQSTYELLDYLLD 1952
>UT1_HUMAN (Q13336) Urea transporter, erythrocyte| Length = 389 Score = 29.6 bits (65), Expect = 3.8 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Frame = +3 Query: 210 HVPASSCLVFVFTRLVGPPP*PAFAGCSFTNWGFLAQAQNIRCHWSFC---LLHMTLTTK 380 H+ A C +F A+ G N F+A+ C W FC LL + +TTK Sbjct: 309 HLLALGCALFT-----------AYLGVGMAN--FMAEVGLPACTWPFCLATLLFLIMTTK 355 Query: 381 SCTIRYLCLAILTSP 425 + I + L+ +T P Sbjct: 356 NSNIYKMPLSKVTYP 370
>REPS1_MOUSE (O54916) RalBP1-associated Eps domain-containing protein 1| (RalBP1-interacting protein 1) Length = 743 Score = 28.9 bits (63), Expect = 6.4 Identities = 18/63 (28%), Positives = 28/63 (44%) Frame = -2 Query: 298 VKEQPAKAGQGGGPTSRVKTKTRQELAGTWRATLPLLPEGDQDYPEDDASSQLYSGFSSL 119 V EQP + G G P +K+ P +P +Q +PE + SS+ + FS Sbjct: 328 VGEQPGEVGYSGSPAEAPPSKS------------PSMPSLNQTWPELNQSSEQWETFSER 375 Query: 118 PSN 110 S+ Sbjct: 376 SSS 378
>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250| kDa) (AKAP 250) (Myasthenia gravis autoantigen gravin) Length = 1781 Score = 28.9 bits (63), Expect = 6.4 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = -1 Query: 422 AGQNGQTKVSDSAGFRRESHMEKTKAPMTPNVLSLGKKPPVGEGAAGKG 276 A G KV GF+ +KT+ P T +L++ K GEGAAG G Sbjct: 166 ANDIGFKKVFKFVGFKFTVKKDKTEKPDTVQLLTV--KKDEGEGAAGAG 212
>FOG_DROME (P40795) Protein folded gastrulation precursor [Contains: Protein| folded gastrulation; G protein-coupled receptor ligand] Length = 730 Score = 28.5 bits (62), Expect = 8.4 Identities = 22/64 (34%), Positives = 31/64 (48%) Frame = -2 Query: 259 PTSRVKTKTRQELAGTWRATLPLLPEGDQDYPEDDASSQLYSGFSSLPSNVNINLCWP*V 80 PT VK + LAG + P P GD DY +D+ S ++ S +P+ + L P V Sbjct: 90 PTDLVKQELI--LAGGSNGSPPPPPIGDYDYGDDEESEEIVYDLSVIPTAMQDGLP-PSV 146 Query: 79 RIGD 68 GD Sbjct: 147 GTGD 150
>K1043_HUMAN (Q96AY4) TPR repeat-containing protein KIAA1043| Length = 1716 Score = 28.5 bits (62), Expect = 8.4 Identities = 18/55 (32%), Positives = 25/55 (45%) Frame = -2 Query: 289 QPAKAGQGGGPTSRVKTKTRQELAGTWRATLPLLPEGDQDYPEDDASSQLYSGFS 125 +P +GGGP R + R + A R+TLP Q P + + Y GFS Sbjct: 1242 KPEGGSEGGGPGGR-QDHDRSKNAYLQRSTLPRSQLPPQTRPAGNKDEEEYEGFS 1295 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,362,242 Number of Sequences: 219361 Number of extensions: 1254219 Number of successful extensions: 3923 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3771 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3922 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)