Clone Name | rbastl02b11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | IBP3_RAT (P15473) Insulin-like growth factor-binding protein 3 p... | 29 | 5.3 | 2 | NU4M_LOCMI (Q36424) NADH-ubiquinone oxidoreductase chain 4 (EC 1... | 28 | 9.0 |
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>IBP3_RAT (P15473) Insulin-like growth factor-binding protein 3 precursor| (IGFBP-3) (IBP-3) (IGF-binding protein 3) Length = 292 Score = 28.9 bits (63), Expect = 5.3 Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 13/84 (15%) Frame = +1 Query: 163 IWRPLLSELQVTR-----IVASGTIPVNPPASC------ILAQQFPPVTLSSLYE--N*P 303 +W L+ L + R +G + P C LAQ PP T + E P Sbjct: 8 LWAAALTALTLLRGPPVARAGAGAVGAGPVVRCEPCDARALAQCAPPPTAPACTELVREP 67 Query: 304 GMVGMETCFLPYGNFCSVNFRRCG 375 G TC L G+ C V RCG Sbjct: 68 GCGCCLTCALREGDACGVYTERCG 91
>NU4M_LOCMI (Q36424) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 444 Score = 28.1 bits (61), Expect = 9.0 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 15/66 (22%) Frame = -2 Query: 153 YSFLLGV*TWNQTVSILFTLVTCCLLIYSNASV---------------VL*EVLYWWFSN 19 YSF+L IL +L CCL+I +++S+ +L +L+ FS+ Sbjct: 57 YSFML----------ILLSLWICCLMITASSSIYSSSYHPNFFVFVVLLLLIMLFCSFSS 106 Query: 18 INLFSF 1 +NLFSF Sbjct: 107 LNLFSF 112 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,951,988 Number of Sequences: 219361 Number of extensions: 1225431 Number of successful extensions: 3215 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3149 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3215 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)