>ILP_BRACL (P22334) Insulin-like peptide precursor [Contains: Insulin-like|
           peptide B chain; Insulin-like peptide A chain]
          Length = 305

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +3

Query: 177 RRRSVVDDSATHAATIHVGTSIRNPYTTGPKSSTNMYTSPPKPAFAPE 320
           RRR +V++   +        S  NPY+T P ++T + T+ P+P  A +
Sbjct: 78  RRRGLVEECCYNVCDYSQLESYCNPYSTAPATATPVRTTEPQPEEAED 125

>CAC2D_RABIT (P13806) Dihydropyridine-sensitive L-type, calcium channel|
           alpha-2/delta subunits precursor [Contains: L-type
           calcium channel alpha-2 subunit; L-type calcium channel
           delta subunit]
          Length = 1106

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -1

Query: 346 NSHGDKAHSSGAKAGLGGDVYILVEDLGPVVYGFRIEVPTWM 221
           N  G  A+ SG       ++YI  + L P V G +I+V +W+
Sbjct: 784 NKSGPGAYESGIMVSKAVEIYIQGKLLKPAVVGIKIDVNSWI 825

>CAC2D_HUMAN (P54289) Dihydropyridine-sensitive L-type, calcium channel|
           alpha-2/delta subunits precursor [Contains: L-type
           calcium channel alpha-2 subunit; L-type calcium channel
           delta subunit]
          Length = 1091

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -1

Query: 346 NSHGDKAHSSGAKAGLGGDVYILVEDLGPVVYGFRIEVPTWM 221
           N  G  A+ SG       ++YI  + L P V G +I+V +W+
Sbjct: 769 NKSGPGAYESGIMVSKAVEIYIQGKLLKPAVVGIKIDVNSWI 810

>TCEA3_MOUSE (P23881) Transcription elongation factor A protein 3 (Transcription|
           elongation factor S-II protein 3) (Transcription
           elongation factor TFIIS.h)
          Length = 347

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +3

Query: 180 RRSVVDDSATHAATIHVGTSIRNPYTTGPKSSTNMYTSPPKPAFAPELCALSPC 341
           RR  VD  ++  ++    +  R+  +     +    +SP  P FAP +C L+PC
Sbjct: 126 RRDSVDSRSSTTSSPKRPSLERSNSSKSKVETPTTPSSPSTPTFAPAVCLLAPC 179

>CAC2D_RAT (P54290) Dihydropyridine-sensitive L-type, calcium channel|
           alpha-2/delta subunits precursor [Contains: L-type
           calcium channel alpha-2 subunit; L-type calcium channel
           delta subunit]
          Length = 1091

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -1

Query: 346 NSHGDKAHSSGAKAGLGGDVYILVEDLGPVVYGFRIEVPTWM 221
           N  G  A+ SG       ++YI  + L P V G +I+V +W+
Sbjct: 769 NKSGPGAYESGIMVSKAVELYIQGKLLKPAVVGIKIDVNSWI 810

>CAC2D_MOUSE (O08532) Dihydropyridine-sensitive L-type, calcium channel|
           alpha-2/delta subunits precursor [Contains: L-type
           calcium channel alpha-2 subunit; L-type calcium channel
           delta subunit]
          Length = 1103

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -1

Query: 346 NSHGDKAHSSGAKAGLGGDVYILVEDLGPVVYGFRIEVPTWM 221
           N  G  A+ SG       ++YI  + L P V G +I+V +W+
Sbjct: 781 NKSGPGAYESGIMVSKAVELYIQGKLLKPAVVGIKIDVNSWI 822

>UBIB_VIBCH (Q9KVQ4) Probable ubiquinone biosynthesis protein ubiB|
          Length = 544

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = -1

Query: 415 QMLLPNETTGQNELVQKVLFKARNSHGDKAHSSGAKAGLGGDVYILVEDLGPV 257
           ++L  +  T    L +K LF  RN H DKA        LG  + + +++LGPV
Sbjct: 23  ELLPEHHLTRAPLLARKSLFWLRNQHADKA--------LGDRLRLALQELGPV 67

>EFG1_PELCD (Q3A834) Elongation factor G 1 (EF-G 1)|
          Length = 691

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
 Frame = +1

Query: 202 VRLTQQPSTSGPQYEIRTRLDLNPLPICIRLHLNLLLHQNCV-------PCPHVSSLP*K 360
           V L   PS  G    I    D NPLP  +R  L   LHQ+C        P   V     +
Sbjct: 511 VTLEIAPSGRGKGLRIVLPEDENPLPARLREELKKCLHQSCAAGIRTGYPLTDVEITIIE 570

Query: 361 EPSEPTHSARLFHLGAA 411
            P EP  +  +  L AA
Sbjct: 571 APFEPGLTTEIGLLAAA 587

>TCEA3_HUMAN (O75764) Transcription elongation factor A protein 3 (Transcription|
           elongation factor S-II protein 3) (Transcription
           elongation factor TFIIS.h)
          Length = 348

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +3

Query: 180 RRSVVDDSATHAATIHVGTSIRNPYTTGPKSSTNMYTSPPKPAFAPELCALSPC 341
           RR  VD  ++ +++    +  R+  +     S    +SP  P FA  +C L+PC
Sbjct: 127 RRDSVDSKSSASSSPKRPSVERSNSSKSKAESPKTPSSPLTPTFASSMCLLAPC 180

>DDX25_HUMAN (Q9UHL0) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box|
           protein 25) (Gonadotropin-regulated testicular RNA
           helicase)
          Length = 483

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 298 LNLLLHQNCVPCPHVSSLP*KEPSEPTHSARLF 396
           LN L+HQ+ V   H   +  K+PS P +S + F
Sbjct: 67  LNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTF 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,079,712
Number of Sequences: 219361
Number of extensions: 1389640
Number of successful extensions: 3500
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3499
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)