>CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3|
          Length = 1396

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 195  FLPNL*QCTVVLEYSVGYNISCQHCRSRKLN 103
            ++ NL  C   LEY  GY ++  H   RKLN
Sbjct: 1319 YMRNLSNCVPTLEYFTGYKMAELHILVRKLN 1349

>OXAA_RICPR (Q9ZE97) Inner membrane protein oxaA|
          Length = 560

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -1

Query: 221 PPMVLFLFSSYPICNNVLWFW-SILSV 144
           P + LF+FSS+P+   + W W +ILS+
Sbjct: 524 PLIFLFMFSSFPVGLLIYWSWNNILSI 550

>OXAA_RICCN (Q92JJ3) Inner membrane protein oxaA|
          Length = 560

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -1

Query: 221 PPMVLFLFSSYPICNNVLWFW-SILSV 144
           P + LF+FSS+P+   + W W +ILS+
Sbjct: 524 PLIFLFMFSSFPVGLLIYWSWNNILSI 550

>ZDHC2_HUMAN (Q9UIJ5) Palmitoyltransferase ZDHHC2 (EC 2.3.1.-) (Zinc finger DHHC|
           domain-containing protein 2) (DHHC-2) (Zinc finger
           protein 372) (Reduced expression associated with
           metastasis protein) (Ream) (Reduced expression in cancer
           protein) (Rec)
          Length = 367

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
 Frame = -2

Query: 211 YYFFSVLTQFVTMYCGFGVFCRLQYIV----SAL*ESKTEFKIILAYYCQPHFSV 59
           Y FF +   +  +YC F     LQY +    + L +++ +F I+  ++    FSV
Sbjct: 169 YKFFLLFLAYSLLYCLFIAATDLQYFIKFWTNGLPDTQAKFHIMFLFFAAAMFSV 223

>ZDHC2_RAT (Q9JKR5) Palmitoyltransferase ZDHHC2 (EC 2.3.1.-) (Zinc finger DHHC|
           domain-containing protein 2) (DHHC-2)
          Length = 366

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
 Frame = -2

Query: 211 YYFFSVLTQFVTMYCGFGVFCRLQYIV----SAL*ESKTEFKIILAYYCQPHFSV 59
           Y FF +   +  +YC F     LQY +    + L +++ +F I+  ++    FSV
Sbjct: 168 YKFFLLFLAYSLLYCLFIAATDLQYFIRFWTNGLPDTQAKFHIMFLFFAAAMFSV 222

>ZDHC2_MOUSE (P59267) Palmitoyltransferase ZDHHC2 (EC 2.3.1.-) (Zinc finger DHHC|
           domain-containing protein 2) (DHHC-2)
          Length = 366

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
 Frame = -2

Query: 211 YYFFSVLTQFVTMYCGFGVFCRLQYIV----SAL*ESKTEFKIILAYYCQPHFSV 59
           Y FF +   +  +YC F     LQY +    + L +++ +F I+  ++    FSV
Sbjct: 168 YKFFLLFLAYSLLYCLFIAATDLQYFIRFWTNGLPDTQAKFHIMFLFFAAAMFSV 222

>OXAA_BACTN (Q8AA76) Inner membrane protein oxaA|
          Length = 618

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 245 VKWDVFVSPPMVLFLFSSYPICNNVLWFWSIL 150
           +KW +++ P M LF+ + YP   N  +F S L
Sbjct: 528 MKWMMYLMPIMFLFVLNDYPSGLNYYYFVSTL 559

>SEN54_ASHGO (Q74ZJ5) tRNA-splicing endonuclease subunit SEN54 (tRNA-intron|
           endonuclease SEN54)
          Length = 455

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
 Frame = +1

Query: 16  DQLPTQK---KNKIKPSKPRNEADSNKPK 93
           D +PT++   +NKI PS+P +  DS K K
Sbjct: 359 DGMPTREFMQRNKIAPSQPHSGGDSRKKK 387


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,826,440
Number of Sequences: 219361
Number of extensions: 719616
Number of successful extensions: 1671
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1671
length of database: 80,573,946
effective HSP length: 81
effective length of database: 62,805,705
effective search space used: 1507336920
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)