ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl02b03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA sequence Length = 2863 Score = 278 bits (140), Expect = 1e-71 Identities = 155/160 (96%) Strand = Plus / Minus Query: 85 aagccaaaataatcttaaattcagttttcgactcctacaatgctgacacgatatattgta 144 |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2863 aagccaaaatgatcttagattcagttttcgactcctacaatgctgacacgatatattgta 2804 Query: 145 accgacagaatactccaaaaccacagtacattgttacaaattgggtaagaactgaaaaga 204 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2803 accgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaaga 2744 Query: 205 aataataccatgggaggagacacaaaaacatcccatttga 244 ||||||| ||| |||||||||||||||||||||||||||| Sbjct: 2743 aataataacattggaggagacacaaaaacatcccatttga 2704 Score = 95.6 bits (48), Expect = 8e-17 Identities = 55/56 (98%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 263 gccttgttcattcccaggctccagcaagagttaggccgccgtcgcc-gagagacca 317 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2693 gccttgttcattcccaggctccagcaagagttaggccgccgtcgccagagagacca 2638
>gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA, complete cds Length = 2887 Score = 272 bits (137), Expect = 6e-70 Identities = 149/153 (97%) Strand = Plus / Minus Query: 90 aaaataatcttaaattcagttttcgactcctacaatgctgacacgatatattgtaaccga 149 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2862 aaaataatcttagattcagttttcgactcctacaatgctgacacgatatattgtaaccga 2803 Query: 150 cagaatactccaaaaccacagtacattgttacaaattgggtaagaactgaaaagaaataa 209 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2802 cagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaagaaataa 2743 Query: 210 taccatgggaggagacacaaaaacatcccattt 242 || ||| |||||||||||||||||||||||||| Sbjct: 2742 taacattggaggagacacaaaaacatcccattt 2710 Score = 101 bits (51), Expect = 1e-18 Identities = 54/55 (98%) Strand = Plus / Minus Query: 263 gccttgttcattcccaggctccagcaagagttaggccgccgtcgccgagagacca 317 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2696 gccttgttcattcccaggctccagcgagagttaggccgccgtcgccgagagacca 2642
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 89.7 bits (45), Expect = 5e-15 Identities = 76/85 (89%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 128 tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 186 |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| | Sbjct: 42105 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 42164 Query: 187 gggtaagaactgaaaagaaataata 211 | ||| | || |||||||| ||||| Sbjct: 42165 gtgtacgcacagaaaagaactaata 42189
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 89.7 bits (45), Expect = 5e-15 Identities = 76/85 (89%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 128 tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 186 |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| | Sbjct: 24921520 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 24921579 Query: 187 gggtaagaactgaaaagaaataata 211 | ||| | || |||||||| ||||| Sbjct: 24921580 gtgtacgcacagaaaagaactaata 24921604
>dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N14, full insert sequence Length = 2907 Score = 89.7 bits (45), Expect = 5e-15 Identities = 76/85 (89%), Gaps = 1/85 (1%) Strand = Plus / Minus Query: 128 tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 186 |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| | Sbjct: 2795 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 2736 Query: 187 gggtaagaactgaaaagaaataata 211 | ||| | || |||||||| ||||| Sbjct: 2735 gtgtacgcacagaaaagaactaata 2711
>dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A02, full insert sequence Length = 1712 Score = 89.7 bits (45), Expect = 5e-15 Identities = 76/85 (89%), Gaps = 1/85 (1%) Strand = Plus / Minus Query: 128 tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 186 |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| | Sbjct: 1701 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 1642 Query: 187 gggtaagaactgaaaagaaataata 211 | ||| | || |||||||| ||||| Sbjct: 1641 gtgtacgcacagaaaagaactaata 1617
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 89.7 bits (45), Expect = 5e-15 Identities = 76/85 (89%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 128 tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 186 |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| | Sbjct: 49634 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 49693 Query: 187 gggtaagaactgaaaagaaataata 211 | ||| | || |||||||| ||||| Sbjct: 49694 gtgtacgcacagaaaagaactaata 49718
>gb|AC008067.3| Homo sapiens BAC clone RP11-303I4 from 2, complete sequence Length = 151242 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 30 acaaaagaaaaacaaaatcaaacca 54 ||||||||||||||||||||||||| Sbjct: 126599 acaaaagaaaaacaaaatcaaacca 126623
>gb|AC125217.3| Mus musculus BAC clone RP23-112D14 from 8, complete sequence Length = 191344 Score = 46.1 bits (23), Expect = 0.068 Identities = 23/23 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaacca 54 ||||||||||||||||||||||| Sbjct: 45652 aaaagaaaaacaaaatcaaacca 45674
>dbj|AP005827.1| Mus musculus genomic DNA, chromosome 16 clone:RP21-668B6, complete sequence Length = 214865 Score = 46.1 bits (23), Expect = 0.068 Identities = 23/23 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaacca 54 ||||||||||||||||||||||| Sbjct: 5120 aaaagaaaaacaaaatcaaacca 5142
>gb|AC154818.2| Mus musculus BAC clone RP23-73C20 from chromosome 16, complete sequence Length = 183223 Score = 46.1 bits (23), Expect = 0.068 Identities = 23/23 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaacca 54 ||||||||||||||||||||||| Sbjct: 159873 aaaagaaaaacaaaatcaaacca 159895
>gb|AC131695.4| Mus musculus BAC clone RP23-396F8 from chromosome 6, complete sequence Length = 199679 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 attaccaacacaaaagaaaaacaaaa 46 |||||| ||||||||||||||||||| Sbjct: 141258 attacccacacaaaagaaaaacaaaa 141233
>gb|AC073864.29| Homo sapiens 12 BAC RP11-227B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 138262 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 attaccaacacaaaagaaaaac 42 |||||||||||||||||||||| Sbjct: 8291 attaccaacacaaaagaaaaac 8270
>gb|AC146552.16| Medicago truncatula clone mth2-9d1, complete sequence Length = 113088 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 acaaaagaaaaacaaaatcaaa 51 |||||||||||||||||||||| Sbjct: 16867 acaaaagaaaaacaaaatcaaa 16888
>gb|AC010016.6| Drosophila melanogaster 3L BAC RP98-10M10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174616 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 ccaacacaaaagaaaaacaaaa 46 |||||||||||||||||||||| Sbjct: 45980 ccaacacaaaagaaaaacaaaa 45959
>gb|AC163646.2| Mus musculus BAC clone RP23-207D1 from chromosome 14, complete sequence Length = 185289 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Minus Query: 26 caacacaaaagaaaaacaaaatcaaa 51 |||||||||| ||||||||||||||| Sbjct: 130057 caacacaaaacaaaaacaaaatcaaa 130032
>gb|AC010558.4| Drosophila melanogaster 3L BAC RPCI98-1K9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170356 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 ccaacacaaaagaaaaacaaaa 46 |||||||||||||||||||||| Sbjct: 164464 ccaacacaaaagaaaaacaaaa 164443
>dbj|AK048465.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130063B20 product:unclassifiable, full insert sequence Length = 3084 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 attaccaacacaaaagaaaaacaaaa 46 |||||| ||||||||||||||||||| Sbjct: 2852 attacccacacaaaagaaaaacaaaa 2827
>gb|AC020718.7| Homo sapiens BAC clone RP11-472L21 from 2, complete sequence Length = 170897 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 31 caaaagaaaaacaaaatcaaac 52 |||||||||||||||||||||| Sbjct: 81865 caaaagaaaaacaaaatcaaac 81844
>emb|BX005372.6| Zebrafish DNA sequence from clone DKEY-76K16, complete sequence Length = 199736 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 acaaaagaaaaacaaaatcaaa 51 |||||||||||||||||||||| Sbjct: 138112 acaaaagaaaaacaaaatcaaa 138133
>gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37 of 83 of the complete sequence Length = 244140 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 ccaacacaaaagaaaaacaaaa 46 |||||||||||||||||||||| Sbjct: 175749 ccaacacaaaagaaaaacaaaa 175728
>emb|Z81057.1|CEF10D11 Caenorhabditis elegans Cosmid F10D11, complete sequence Length = 21504 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Plus Query: 34 aagaaaaacaaaatcaaaccatcaaa 59 |||||||| ||||||||||||||||| Sbjct: 20437 aagaaaaaaaaaatcaaaccatcaaa 20462
>gb|AC100500.10| Mus musculus chromosome 3, clone RP23-143I10, complete sequence Length = 179369 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 aataccatgggaggagacaca 228 ||||||||||||||||||||| Sbjct: 129721 aataccatgggaggagacaca 129741
>gb|AC159093.4| Mus musculus chromosome 15, clone RP23-117F23, complete sequence Length = 200512 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaaccatcaaaa 60 |||||||||||||| |||||||| ||||| Sbjct: 158754 aaaagaaaaacaaattcaaaccagcaaaa 158782
>gb|AC133874.10| Mus musculus chromosome 19, clone RP23-81N16, complete sequence Length = 215113 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 acaaaagaaaaacaaaatcaa 50 ||||||||||||||||||||| Sbjct: 15201 acaaaagaaaaacaaaatcaa 15181
>gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete sequence Length = 131049 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 aaaataatcttaaattcagtt 110 ||||||||||||||||||||| Sbjct: 100850 aaaataatcttaaattcagtt 100830
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 caacacaaaagaaaaacaaaa 46 ||||||||||||||||||||| Sbjct: 1196953 caacacaaaagaaaaacaaaa 1196933
>gb|AC122753.11| Mus musculus chromosome 5, clone RP24-492O4, complete sequence Length = 183819 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 31 caaaagaaaaacaaaatcaaaccatcaaa 59 ||||| |||||||||| |||||||||||| Sbjct: 31804 caaaacaaaaacaaaaacaaaccatcaaa 31776
>gb|AC165239.3| Mus musculus chromosome 19, clone RP24-73C2, complete sequence Length = 208461 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 acaaaagaaaaacaaaatcaaacca 54 |||||||||| |||||||||||||| Sbjct: 167107 acaaaagaaatacaaaatcaaacca 167083
>gb|AC174297.11| Medicago truncatula clone mth2-73p24, complete sequence Length = 115210 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 aaaataatcttaaattcagtt 110 ||||||||||||||||||||| Sbjct: 48268 aaaataatcttaaattcagtt 48248
>gb|AC146815.1| Mus musculus BAC clone RP23-239A11 from chromosome 8, complete sequence Length = 203073 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 acacaaaagaaaaacaaaatcaaac 52 |||||||||||||||||||| |||| Sbjct: 33860 acacaaaagaaaaacaaaataaaac 33884
>ref|XM_720923.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00647) partial mRNA Length = 300 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 caaaagaaaaacaaaatcaaa 51 ||||||||||||||||||||| Sbjct: 185 caaaagaaaaacaaaatcaaa 205
>gb|AC144540.7| Medicago truncatula clone mth2-19p16, complete sequence Length = 78737 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 aaaataatcttaaattcagtt 110 ||||||||||||||||||||| Sbjct: 25465 aaaataatcttaaattcagtt 25445
>gb|AC146745.20| Medicago truncatula clone mth2-53p19, complete sequence Length = 121952 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 aaaataatcttaaattcagtt 110 ||||||||||||||||||||| Sbjct: 34894 aaaataatcttaaattcagtt 34914
>gb|AC144657.6| Medicago truncatula clone mth2-16a6, complete sequence Length = 92738 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 aaaataatcttaaattcagtt 110 ||||||||||||||||||||| Sbjct: 85376 aaaataatcttaaattcagtt 85396
>gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete sequence Length = 97982 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 aaaataatcttaaattcagtt 110 ||||||||||||||||||||| Sbjct: 42222 aaaataatcttaaattcagtt 42202
>emb|BX927394.14| Zebrafish DNA sequence from clone CH211-262I10 in linkage group 21, complete sequence Length = 164899 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 ctacaatgctgacacgatatattgt 143 |||||||||||| |||||||||||| Sbjct: 122731 ctacaatgctgaaacgatatattgt 122707
>emb|AL596107.5| Human DNA sequence from clone RP11-201D24 on chromosome 1, complete sequence Length = 31976 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaac 52 ||||||||||||||||||||| Sbjct: 22739 aaaagaaaaacaaaatcaaac 22759
>emb|AL157361.6| Human DNA sequence from clone RP11-132L12 on chromosome 13q21.33-22.3 Contains a signal sequence receptor, alpha (translocon-associated protein alpha) (SSR1) pseudogene, complete sequence Length = 151603 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 tcccaggctccagcaagagtt 294 ||||||||||||||||||||| Sbjct: 87107 tcccaggctccagcaagagtt 87087
>emb|AL136305.14| Human DNA sequence from clone RP1-259A10 on chromosome 6p22.1-23 Contains the gene for an ssDNA binding protein and a CpG island, complete sequence Length = 150520 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaaccatcaaaa 60 |||||||| ||||||| |||||||||||| Sbjct: 54997 aaaagaaacacaaaataaaaccatcaaaa 55025
>gb|AC117661.20| Mus musculus chromosome 6, clone RP23-343P1, complete sequence Length = 180209 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 agaaaaacaaaatcaaaccat 55 ||||||||||||||||||||| Sbjct: 79104 agaaaaacaaaatcaaaccat 79124
>gb|AC154776.2| Mus musculus BAC clone RP23-101N7 from chromosome 14, complete sequence Length = 215871 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 acaaaagaaaaacaaaatcaaacca 54 |||||| |||||||||||||||||| Sbjct: 152985 acaaaacaaaaacaaaatcaaacca 152961
>gb|AC026415.4| Homo sapiens chromosome 5 clone CTD-2046I8, complete sequence Length = 67124 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 tcccaggctccagcaagagtt 294 ||||||||||||||||||||| Sbjct: 3598 tcccaggctccagcaagagtt 3618
>gb|AC152161.4| Mus musculus chromosome 19, clone RP23-162O21, complete sequence Length = 194652 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 acaaaagaaaaacaaaatcaaacca 54 |||||||||| |||||||||||||| Sbjct: 86888 acaaaagaaatacaaaatcaaacca 86864
>gb|AC102443.11| Mus musculus chromosome 3, clone RP24-191D1, complete sequence Length = 147088 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 caaaagaaaaacaaaatcaaa 51 ||||||||||||||||||||| Sbjct: 132634 caaaagaaaaacaaaatcaaa 132614
>gb|AC157544.7| Mus musculus chromosome 8, clone RP23-271P20, complete sequence Length = 159843 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 28 acacaaaagaaaaacaaaatcaaac 52 |||||||||||||||||||| |||| Sbjct: 483 acacaaaagaaaaacaaaataaaac 459
>gb|AF332859.1|AF332859S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exon 5 and partial cds Length = 270491 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 30 acaaaagaaaaacaaaatcaaacca 54 |||||| |||||||||||||||||| Sbjct: 62819 acaaaacaaaaacaaaatcaaacca 62843
>emb|BX088526.6| Zebrafish DNA sequence from clone CH211-51H9 in linkage group 8, complete sequence Length = 187161 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 aacacaaaagaaaaacaaaat 47 ||||||||||||||||||||| Sbjct: 153581 aacacaaaagaaaaacaaaat 153561
>gb|AC154717.2| Mus musculus BAC clone RP24-369E16 from chromosome 17, complete sequence Length = 159625 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaaccatcaaaa 60 |||| |||||||||| ||||||||||||| Sbjct: 22063 aaaacaaaaacaaaaacaaaccatcaaaa 22035
>gb|AC022127.4|AC022127 Homo sapiens chromosome 5 clone CTD-2151N11, complete sequence Length = 83029 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 tcccaggctccagcaagagtt 294 ||||||||||||||||||||| Sbjct: 34025 tcccaggctccagcaagagtt 34005
>emb|CT033770.2| Medicago truncatula chromosome 5 clone mth2-176e1, COMPLETE SEQUENCE Length = 138194 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 aaaataatcttaaattcagtt 110 ||||||||||||||||||||| Sbjct: 84861 aaaataatcttaaattcagtt 84841
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaac 52 ||||||||||||||||||||| Sbjct: 3252579 aaaagaaaaacaaaatcaaac 3252559
>gb|AC174449.2| Mus musculus BAC clone RP23-338O19 from chromosome 6, complete sequence Length = 217169 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 agaaaaacaaaatcaaaccat 55 ||||||||||||||||||||| Sbjct: 45971 agaaaaacaaaatcaaaccat 45991
>gb|AC115781.9| Mus musculus chromosome 19, clone RP23-167K23, complete sequence Length = 210190 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 acaaaagaaaaacaaaatcaa 50 ||||||||||||||||||||| Sbjct: 183802 acaaaagaaaaacaaaatcaa 183782
>emb|CT571243.9| Mouse DNA sequence from clone RP23-122I21 on chromosome 9, complete sequence Length = 158763 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaaccatcaaaa 60 |||||||||| |||||||||||| ||||| Sbjct: 47776 aaaagaaaaaaaaaatcaaaccaacaaaa 47804
>gb|AC171204.1| Mus musculus BAC clone RP23-312J21 from chromosome 9, complete sequence Length = 223399 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaaccatcaaaa 60 |||||||||| |||||||||||| ||||| Sbjct: 92613 aaaagaaaaaaaaaatcaaaccaacaaaa 92641
>emb|AL929570.7| Mouse DNA sequence from clone RP23-74G9 on chromosome 2, complete sequence Length = 230193 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 31 caaaagaaaaacaaaatcaaaccat 55 ||||||||||| ||||||||||||| Sbjct: 4934 caaaagaaaaaaaaaatcaaaccat 4910
>gb|AC153383.1| Mus musculus 6 BAC RP23-168L2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197962 Score = 40.1 bits (20), Expect = 4.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 34 aagaaaaacaaaatcaaaccatcaaaac 61 ||||||||||||| ||||||| |||||| Sbjct: 77403 aagaaaaacaaaaccaaaccaacaaaac 77430
>gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0109A13, complete sequence Length = 134258 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 10917 aaaagaaaaacaaaatcaaa 10936
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 119989 aaaagaaaaacaaaatcaaa 120008
>gb|AC167724.6| Mus musculus 10 BAC RP23-331P17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230186 Score = 40.1 bits (20), Expect = 4.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 34 aagaaaaacaaaatcaaaccatcaaaac 61 ||||||||||||| ||||||| |||||| Sbjct: 72197 aagaaaaacaaaaccaaaccaacaaaac 72170
>gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, complete genome Length = 706569 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acacaaaagaaaaacaaaat 47 |||||||||||||||||||| Sbjct: 295387 acacaaaagaaaaacaaaat 295406 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acacaaaagaaaaacaaaat 47 |||||||||||||||||||| Sbjct: 291184 acacaaaagaaaaacaaaat 291203
>gb|AC139758.3| Mus musculus BAC clone RP23-367E7 from chromosome 14, complete sequence Length = 210969 Score = 40.1 bits (20), Expect = 4.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 27 aacacaaaagaaaaacaaaatcaaaccatcaa 58 |||| ||||| ||||||||| ||||||||||| Sbjct: 56775 aacaaaaaagcaaaacaaaagcaaaccatcaa 56744
>ref|XM_712376.1| Candida albicans SC5314 hypothetical protein (CaO19_8147), mRNA Length = 1686 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 attaccaacacaaaagaaaaacaa 44 |||||||||||||| ||||||||| Sbjct: 1601 attaccaacacaaatgaaaaacaa 1578
>ref|XM_712286.1| Candida albicans SC5314 hypothetical protein (CaO19_516), mRNA Length = 1686 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 attaccaacacaaaagaaaaacaa 44 |||||||||||||| ||||||||| Sbjct: 1601 attaccaacacaaatgaaaaacaa 1578
>gb|AF165141.4| Homo sapiens chromosome 8 clone XX-224L15 map 8q21.13, complete sequence Length = 46919 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 43040 aaaagaaaaacaaaatcaaa 43021
>gb|AC084697.4| Homo sapiens chromosome 8 clone XX-6L9 map q21.13, complete sequence Length = 107517 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 68058 aaaagaaaaacaaaatcaaa 68039
>ref|XM_920232.2| PREDICTED: Mus musculus Rho guanine nucleotide exchange factor (GEF) 17, transcript variant 6 (Arhgef17), mRNA Length = 6944 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaagaaaaacaaaatcaaac 52 |||||||||||||||||||| Sbjct: 4443 aaagaaaaacaaaatcaaac 4424
>ref|XM_907157.2| PREDICTED: Mus musculus Rho guanine nucleotide exchange factor (GEF) 17, transcript variant 5 (Arhgef17), mRNA Length = 9828 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaagaaaaacaaaatcaaac 52 |||||||||||||||||||| Sbjct: 7327 aaagaaaaacaaaatcaaac 7308
>ref|XM_989385.1| PREDICTED: Mus musculus Rho guanine nucleotide exchange factor (GEF) 17, transcript variant 1 (Arhgef17), mRNA Length = 6944 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaagaaaaacaaaatcaaac 52 |||||||||||||||||||| Sbjct: 4445 aaagaaaaacaaaatcaaac 4426
>ref|XM_989415.1| PREDICTED: Mus musculus Rho guanine nucleotide exchange factor (GEF) 17, transcript variant 2 (Arhgef17), mRNA Length = 7948 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaagaaaaacaaaatcaaac 52 |||||||||||||||||||| Sbjct: 5449 aaagaaaaacaaaatcaaac 5430
>ref|XM_989450.1| PREDICTED: Mus musculus Rho guanine nucleotide exchange factor (GEF) 17, transcript variant 3 (Arhgef17), mRNA Length = 9828 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaagaaaaacaaaatcaaac 52 |||||||||||||||||||| Sbjct: 7329 aaagaaaaacaaaatcaaac 7310
>ref|XM_898398.2| PREDICTED: Mus musculus Rho guanine nucleotide exchange factor (GEF) 17, transcript variant 3 (Arhgef17), mRNA Length = 6944 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaagaaaaacaaaatcaaac 52 |||||||||||||||||||| Sbjct: 4445 aaagaaaaacaaaatcaaac 4426
>ref|XM_992030.1| PREDICTED: Mus musculus Rho guanine nucleotide exchange factor (GEF) 17, transcript variant 4 (Arhgef17), mRNA Length = 7948 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaagaaaaacaaaatcaaac 52 |||||||||||||||||||| Sbjct: 5449 aaagaaaaacaaaatcaaac 5430
>ref|XM_133692.9| PREDICTED: Mus musculus Rho guanine nucleotide exchange factor (GEF) 17, transcript variant 1 (Arhgef17), mRNA Length = 10250 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaagaaaaacaaaatcaaac 52 |||||||||||||||||||| Sbjct: 7751 aaagaaaaacaaaatcaaac 7732
>gb|AC122299.5| Mus musculus BAC clone RP23-270L23 from chromosome 5, complete sequence Length = 209091 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 caaaagaaaaacaaaatcaaacca 54 ||||||||||| |||||||||||| Sbjct: 172049 caaaagaaaaaaaaaatcaaacca 172026
>gb|AC116586.6| Mus musculus BAC clone RP23-402K15 from chromosome 7, complete sequence Length = 191174 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaagaaaaacaaaatcaaac 52 |||||||||||||||||||| Sbjct: 99801 aaagaaaaacaaaatcaaac 99782
>gb|BC028887.1| Mus musculus Rho guanine nucleotide exchange factor (GEF) 17, mRNA (cDNA clone IMAGE:3967048), with apparent retained intron Length = 2496 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaagaaaaacaaaatcaaac 52 |||||||||||||||||||| Sbjct: 2369 aaagaaaaacaaaatcaaac 2350
>gb|AC124740.4| Mus musculus BAC clone RP23-356M1 from chromosome 18, complete sequence Length = 190023 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 cccaggctccagcaagagtt 294 |||||||||||||||||||| Sbjct: 97827 cccaggctccagcaagagtt 97808
>emb|AL772143.31| Zebrafish DNA sequence from clone CH211-158B22 in linkage group 20, complete sequence Length = 73696 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 16926 aaaagaaaaacaaaatcaaa 16907
>gb|AC132337.3| Mus musculus BAC clone RP24-153D21 from chromosome 6, complete sequence Length = 146358 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 acacaaaagaaaaacaaaatcaaa 51 |||||||| ||||||||||||||| Sbjct: 44612 acacaaaacaaaaacaaaatcaaa 44635
>gb|AC091626.2| Danio rerio clone 101C7, complete sequence Length = 75015 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 68193 aaaagaaaaacaaaatcaaa 68174
>gb|AC122835.3| Mus musculus BAC clone RP23-187I18 from 3, complete sequence Length = 218449 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 acaaaagaaaaacaaaatca 49 |||||||||||||||||||| Sbjct: 154578 acaaaagaaaaacaaaatca 154559
>emb|CR555294.10| Zebrafish DNA sequence from clone CH211-169P4 in linkage group 19, complete sequence Length = 142042 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 16687 aaaagaaaaacaaaatcaaa 16706
>gb|AC123520.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034O04, complete sequence Length = 164882 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 53691 aaaagaaaaacaaaatcaaa 53710
>gb|AC121927.2| Mus musculus BAC clone RP24-202N20 from 10, complete sequence Length = 164073 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaaccat 55 |||| ||||||||||||||||||| Sbjct: 67312 aaaacaaaaacaaaatcaaaccat 67289
>gb|BC035332.1| Mus musculus Rho guanine nucleotide exchange factor (GEF) 17, mRNA (cDNA clone IMAGE:4935232), partial cds Length = 3351 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaagaaaaacaaaatcaaac 52 |||||||||||||||||||| Sbjct: 3226 aaagaaaaacaaaatcaaac 3207
>gb|AC150205.5| Medicago truncatula clone mth2-72l17, complete sequence Length = 130555 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acacaaaagaaaaacaaaat 47 |||||||||||||||||||| Sbjct: 614 acacaaaagaaaaacaaaat 595
>emb|CR391913.7| Zebrafish DNA sequence from clone DKEY-118P6 in linkage group 5, complete sequence Length = 190731 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 120440 aaaagaaaaacaaaatcaaa 120459
>emb|BX571952.13| Zebrafish DNA sequence from clone DKEY-35E8 in linkage group 11, complete sequence Length = 175925 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 175263 aaaagaaaaacaaaatcaaa 175244
>emb|AL137161.24| Human DNA sequence from clone RP1-130L23 on chromosome 11p12-14.1, complete sequence Length = 55859 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gaaaaacaaaatcaaaccat 55 |||||||||||||||||||| Sbjct: 49687 gaaaaacaaaatcaaaccat 49706
>emb|AL035467.23|HS288M22 Human DNA sequence from clone RP1-288M22 on chromosome 6q12-13 Contains a novel gene, the gene for a novel protein (FLJ13189) and a CpG Island, complete sequence Length = 155960 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 acaaaagaaaaacaaaatca 49 |||||||||||||||||||| Sbjct: 96544 acaaaagaaaaacaaaatca 96525
>gb|AC157915.4| Mus musculus chromosome 19, clone RP24-294L7, complete sequence Length = 148975 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 aacacaaaagaaaaacaaaa 46 |||||||||||||||||||| Sbjct: 43393 aacacaaaagaaaaacaaaa 43374
>emb|CR383672.6| Zebrafish DNA sequence from clone DKEY-11P10 in linkage group 24, complete sequence Length = 231583 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 152118 aaaagaaaaacaaaatcaaa 152137
>ref|XM_786511.1| PREDICTED: Strongylocentrotus purpuratus similar to bromodomain and WD repeat domain containing 2 (LOC586741), mRNA Length = 8214 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 aacacaaaagaaaaacaaaa 46 |||||||||||||||||||| Sbjct: 2773 aacacaaaagaaaaacaaaa 2792
>gb|AC090255.4| Homo sapiens chromosome 8, clone RP11-34M16, complete sequence Length = 145705 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 54717 aaaagaaaaacaaaatcaaa 54698
>emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chromosome 13 Contains the Foxq1 gene for forkhead box Q1 (Hfh1l), two novel genes and two CpG islands, complete sequence Length = 187709 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 ttcattcccaggctccagca 288 |||||||||||||||||||| Sbjct: 35935 ttcattcccaggctccagca 35916
>emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo-8-phosphate synthase, exons 1-4 Length = 1812 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 taagaactgaaaagaaataa 209 |||||||||||||||||||| Sbjct: 639 taagaactgaaaagaaataa 620
>emb|CR385022.10| Zebrafish DNA sequence from clone CH211-63C12 in linkage group 23, complete sequence Length = 163551 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 24722 aaaagaaaaacaaaatcaaa 24703
>emb|CR855858.5| Zebrafish DNA sequence from clone CH211-113H5 in linkage group 24, complete sequence Length = 152666 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 atgctgacacgatatattgt 143 |||||||||||||||||||| Sbjct: 54458 atgctgacacgatatattgt 54439
>emb|BX897667.19| Zebrafish DNA sequence from clone CH211-278K1 in linkage group 13, complete sequence Length = 149783 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 aacacaaaagaaaaacaaaa 46 |||||||||||||||||||| Sbjct: 59281 aacacaaaagaaaaacaaaa 59300
>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3, complete sequence Length = 241961 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 atgctgacacgatatattgt 143 |||||||||||||||||||| Sbjct: 198757 atgctgacacgatatattgt 198776
>emb|BX664751.9| Zebrafish DNA sequence from clone CH211-61F14 in linkage group 2, complete sequence Length = 106773 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 aaagaaaaacaaaatcaaac 52 |||||||||||||||||||| Sbjct: 68760 aaagaaaaacaaaatcaaac 68779
>emb|BX649301.3| Zebrafish DNA sequence from clone DKEY-208D13 in linkage group 10, complete sequence Length = 149467 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 71557 aaaagaaaaacaaaatcaaa 71538
>emb|BX927338.6| Zebrafish DNA sequence from clone CH211-223O15 in linkage group 5, complete sequence Length = 187498 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 aacacaaaagaaaaacaaaa 46 |||||||||||||||||||| Sbjct: 72621 aacacaaaagaaaaacaaaa 72602
>emb|BX936403.9| Zebrafish DNA sequence from clone CH211-281A24 in linkage group 5, complete sequence Length = 142908 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 acaaaagaaaaacaaaatca 49 |||||||||||||||||||| Sbjct: 133690 acaaaagaaaaacaaaatca 133671
>emb|BX530022.5| Zebrafish DNA sequence from clone DKEY-29A22 in linkage group 21, complete sequence Length = 139415 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 97546 aaaagaaaaacaaaatcaaa 97527
>emb|CR380839.1|PTB083D21 Pan troglodytes chromosome X BAC PTB-083D21, complete sequence Length = 186291 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gaaaaacaaaatcaaaccat 55 |||||||||||||||||||| Sbjct: 47407 gaaaaacaaaatcaaaccat 47388
>gb|AC142095.9| Medicago truncatula clone mth2-14c17, complete sequence Length = 110037 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 caaaagaaaaacaaaatcaa 50 |||||||||||||||||||| Sbjct: 77721 caaaagaaaaacaaaatcaa 77702
>gb|AC093217.4| Homo sapiens chromosome 5 clone CTD-2120M21, complete sequence Length = 173501 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 73302 aaaagaaaaacaaaatcaaa 73283
>gb|AC109496.2| Homo sapiens chromosome 5 clone RP11-93D22, complete sequence Length = 186984 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 aacacaaaagaaaaacaaaa 46 |||||||||||||||||||| Sbjct: 101430 aacacaaaagaaaaacaaaa 101411
>gb|AC010600.6| Homo sapiens chromosome 5 clone CTC-564D18, complete sequence Length = 173349 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 aacacaaaagaaaaacaaaa 46 |||||||||||||||||||| Sbjct: 17860 aacacaaaagaaaaacaaaa 17841
>gb|AC104371.4| Homo sapiens chromosome 8, clone RP11-383N10, complete sequence Length = 170106 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ctgaaaagaaataataccat 215 |||||||||||||||||||| Sbjct: 56014 ctgaaaagaaataataccat 55995
>gb|AC008158.16| Homo sapiens chromosome 17, clone RP11-42F20, complete sequence Length = 148110 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ttgttcattcccaggctcca 285 |||||||||||||||||||| Sbjct: 70836 ttgttcattcccaggctcca 70817
>gb|AC093848.2| Homo sapiens BAC clone RP11-486G21 from 4, complete sequence Length = 175064 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 118205 aaaagaaaaacaaaatcaaa 118186
>gb|AC108174.1| Homo sapiens chromosome 5 clone RP11-78C3, complete sequence Length = 162435 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gaaaaacaaaatcaaaccat 55 |||||||||||||||||||| Sbjct: 87439 gaaaaacaaaatcaaaccat 87420
>gb|AC008650.8| Homo sapiens chromosome 5 clone CTB-186M2, complete sequence Length = 139226 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 aagccaaaataatcttaaat 104 |||||||||||||||||||| Sbjct: 28464 aagccaaaataatcttaaat 28483
>gb|M26434.1|HUMHPRTB Human hypoxanthine phosphoribosyltransferase (HPRT) gene, complete cds Length = 56737 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gaaaaacaaaatcaaaccat 55 |||||||||||||||||||| Sbjct: 51879 gaaaaacaaaatcaaaccat 51898
>gb|AC005488.2| Homo sapiens BAC clone RP11-313P13 from 7, complete sequence Length = 185737 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 acacaaaagaaaaacaaaatcaaa 51 |||| ||||||||||||||||||| Sbjct: 25727 acaccaaagaaaaacaaaatcaaa 25704
>gb|AC040914.5|AC040914 Homo sapiens chromosome 8, clone RP11-343P9, complete sequence Length = 183067 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ctgaaaagaaataataccat 215 |||||||||||||||||||| Sbjct: 162881 ctgaaaagaaataataccat 162862
>gb|AC000159.6| Homo sapiens Chromosome 11q13 BAC Clone b79g17, complete sequence Length = 108523 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 85418 aaaagaaaaacaaaatcaaa 85399
>dbj|AK038355.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130097D18 product:unclassifiable, full insert sequence Length = 719 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 cccaggctccagcaagagtt 294 |||||||||||||||||||| Sbjct: 28 cccaggctccagcaagagtt 9
>gb|AC160403.5| Mus musculus 10 BAC RP24-286J14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 180869 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 aacacaaaagaaaaacaaaa 46 |||||||||||||||||||| Sbjct: 62160 aacacaaaagaaaaacaaaa 62141
>dbj|AK033211.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030463K16 product:weakly similar to TUMOR ENDOTHELIAL MARKER 4 [Homo sapiens], full insert sequence Length = 2654 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaagaaaaacaaaatcaaac 52 |||||||||||||||||||| Sbjct: 1739 aaagaaaaacaaaatcaaac 1720
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 5843807 aaaagaaaaacaaaatcaaa 5843826
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 14784575 aaaagaaaaacaaaatcaaa 14784594
>gb|AC017004.4| Homo sapiens BAC clone RP11-88C6 from 2, complete sequence Length = 184850 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 caaaagaaaaacaaaatcaa 50 |||||||||||||||||||| Sbjct: 105105 caaaagaaaaacaaaatcaa 105124
>gb|AC010000.5|AC010000 Homo sapiens chromosome 8 clone RP11-34M16, complete sequence Length = 145588 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 54601 aaaagaaaaacaaaatcaaa 54582
>gb|AC006434.5|AC006434 Genomic sequence for Arabidopsis thaliana BAC F10A5, complete sequence Length = 129547 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 37798 aaaagaaaaacaaaatcaaa 37817
>gb|AC127286.3| Mus musculus BAC clone RP23-340I4 from chromosome unknown, complete sequence Length = 190953 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 102842 aaaagaaaaacaaaatcaaa 102823
>gb|AC008430.3|AC008430 Homo sapiens chromosome 5 clone CTC-310F2, complete sequence Length = 199912 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 aacacaaaagaaaaacaaaa 46 |||||||||||||||||||| Sbjct: 67179 aacacaaaagaaaaacaaaa 67160
>emb|BX004833.16| Zebrafish DNA sequence from clone DKEY-153J5 in linkage group 17, complete sequence Length = 216190 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 79414 aaaagaaaaacaaaatcaaa 79395
>emb|BX248131.6| Zebrafish DNA sequence from clone CH211-236P5, complete sequence Length = 162685 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 aacacaaaagaaaaacaaaa 46 |||||||||||||||||||| Sbjct: 8999 aacacaaaagaaaaacaaaa 9018
>emb|BX293568.7| Zebrafish DNA sequence from clone CH211-215F13 in linkage group 20, complete sequence Length = 221849 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 188340 aaaagaaaaacaaaatcaaa 188321
>emb|AL731647.13| Mouse DNA sequence from clone RP23-226L1 on chromosome X, complete sequence Length = 185319 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 aacacaaaagaaaaacaaaa 46 |||||||||||||||||||| Sbjct: 162220 aacacaaaagaaaaacaaaa 162201
>emb|AL935194.4| Zebrafish DNA sequence from clone CH211-237E12, complete sequence Length = 145569 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 atgctgacacgatatattgt 143 |||||||||||||||||||| Sbjct: 50947 atgctgacacgatatattgt 50928
>emb|AL929243.7| Zebrafish DNA sequence from clone DKEYP-15G8, complete sequence Length = 159656 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 31125 aaaagaaaaacaaaatcaaa 31106
>dbj|AB008264.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBD2 Length = 79976 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 aacacaaaagaaaaacaaaatcaa 50 |||| ||||||||||||||||||| Sbjct: 43900 aacaaaaaagaaaaacaaaatcaa 43923
>dbj|AB007645.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K8K14 Length = 72698 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 aagaaaaacaaaatcaaacc 53 |||||||||||||||||||| Sbjct: 16921 aagaaaaacaaaatcaaacc 16902
>emb|BX539328.4| Mouse DNA sequence from clone RP23-108I21 on chromosome X, complete sequence Length = 113887 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 74162 aaaagaaaaacaaaatcaaa 74181
>emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in linkage group 20, complete sequence Length = 239874 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 atgctgacacgatatattgt 143 |||||||||||||||||||| Sbjct: 46843 atgctgacacgatatattgt 46824
>emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 in linkage group 20, complete sequence Length = 189717 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 atgctgacacgatatattgt 143 |||||||||||||||||||| Sbjct: 78894 atgctgacacgatatattgt 78875
>emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in linkage group 20, complete sequence Length = 209360 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 atgctgacacgatatattgt 143 |||||||||||||||||||| Sbjct: 38990 atgctgacacgatatattgt 38971
>emb|AL772209.5| Zebrafish DNA sequence from clone DKEY-49F1 in linkage group 17, complete sequence Length = 202805 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 163065 aaaagaaaaacaaaatcaaa 163046
>dbj|AP001187.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-665N17, complete sequence Length = 171793 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 93088 aaaagaaaaacaaaatcaaa 93107
>dbj|AK122250.1| Mus musculus mRNA for mKIAA0337 protein Length = 4516 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaagaaaaacaaaatcaaac 52 |||||||||||||||||||| Sbjct: 4406 aaagaaaaacaaaatcaaac 4387
>gb|BC082850.1| Xenopus laevis hypothetical LOC494750, mRNA (cDNA clone MGC:81560 IMAGE:6862996), complete cds Length = 2291 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 acacaaaagaaaaacaaaat 47 |||||||||||||||||||| Sbjct: 1269 acacaaaagaaaaacaaaat 1250
>emb|BX927330.9| Zebrafish DNA sequence from clone DKEY-43B14 in linkage group 2, complete sequence Length = 203149 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 40942 aaaagaaaaacaaaatcaaa 40961
>gb|AC153487.1| Taeniopygia guttata clone TG__Ba0319A15, complete sequence Length = 136080 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ttcccaggctccagcaagag 292 |||||||||||||||||||| Sbjct: 42008 ttcccaggctccagcaagag 41989
>emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in linkage group 1, complete sequence Length = 184073 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 atgctgacacgatatattgt 143 |||||||||||||||||||| Sbjct: 135077 atgctgacacgatatattgt 135096
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 5910284 aaaagaaaaacaaaatcaaa 5910303
>emb|AL133246.3|CNS01DUJ BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 852C13 of library RPCI-11 from chromosome 2 of Homo sapiens (Human) Length = 222730 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 200977 aaaagaaaaacaaaatcaaa 200958
>gb|AC150744.2| Mus musculus BAC clone RP24-98O8 from 7, complete sequence Length = 191727 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 aaagaaaaacaaaatcaaac 52 |||||||||||||||||||| Sbjct: 158590 aaagaaaaacaaaatcaaac 158609
>gb|AC127581.4| Mus musculus BAC clone RP24-88B13 from 9, complete sequence Length = 204684 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 acaaaagaaaaacaaaatcaaacc 53 |||||||||||||||||| ||||| Sbjct: 177106 acaaaagaaaaacaaaataaaacc 177083
>gb|AC004383.1|AC004383 Human Chromosome X clone bWXD187, complete sequence Length = 156461 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gaaaaacaaaatcaaaccat 55 |||||||||||||||||||| Sbjct: 95012 gaaaaacaaaatcaaaccat 95031
>emb|AL928954.9| Zebrafish DNA sequence from clone CH211-127D4 in linkage group 5, complete sequence Length = 222888 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 acaaaagaaaaacaaaatca 49 |||||||||||||||||||| Sbjct: 212300 acaaaagaaaaacaaaatca 212319
>emb|Z83317.1|CEF13G11 Caenorhabditis elegans Cosmid F13G11, complete sequence Length = 38225 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 caaaagaaaaacaaaatcaa 50 |||||||||||||||||||| Sbjct: 2724 caaaagaaaaacaaaatcaa 2705
>emb|AL935198.6| Zebrafish DNA sequence from clone CH211-198E13, complete sequence Length = 200697 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 aacacaaaagaaaaacaaaa 46 |||||||||||||||||||| Sbjct: 107771 aacacaaaagaaaaacaaaa 107752
>emb|AL844210.7| Mouse DNA sequence from clone RP23-235I13 on chromosome X, complete sequence Length = 140246 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 aacacaaaagaaaaacaaaa 46 |||||||||||||||||||| Sbjct: 119439 aacacaaaagaaaaacaaaa 119458
>emb|AL731565.17| Mouse DNA sequence from clone RP23-83D8 on chromosome 4, complete sequence Length = 185273 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 aaaagaaaaacaaaatcaaa 51 |||||||||||||||||||| Sbjct: 16538 aaaagaaaaacaaaatcaaa 16519
>emb|AL672096.4| Mouse DNA sequence from clone RP23-293N20 on chromosome X, complete sequence Length = 179420 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 accatgggaggagacacaaa 230 |||||||||||||||||||| Sbjct: 90166 accatgggaggagacacaaa 90147
>emb|AL844513.8| Mouse DNA sequence from clone RP23-132A3 on chromosome 2, complete sequence Length = 131184 Score = 40.1 bits (20), Expect = 4.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 caaaagaaaaacaaaatcaaacca 54 ||||||||||| |||||||||||| Sbjct: 100733 caaaagaaaaaaaaaatcaaacca 100710
>gb|AC102553.8| Mus musculus chromosome 19, clone RP23-159D6, complete sequence Length = 181534 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 aacacaaaagaaaaacaaaa 46 |||||||||||||||||||| Sbjct: 147715 aacacaaaagaaaaacaaaa 147696 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,299,079 Number of Sequences: 3902068 Number of extensions: 4299079 Number of successful extensions: 141336 Number of sequences better than 10.0: 163 Number of HSP's better than 10.0 without gapping: 163 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 140718 Number of HSP's gapped (non-prelim): 613 length of query: 317 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 295 effective length of database: 17,147,199,772 effective search space: 5058423932740 effective search space used: 5058423932740 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
