>SYI_CHLAB (Q5L5L0) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
            ligase) (IleRS)
          Length = 1043

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = -3

Query: 457  EVSQFFATRVKPSFERALKQSLERVRISARWIDSIKSEPSLAQT-VQQLLLQEF*AAPLY 281
            E   F  T VKP+F     +SL R R+  +  D  K+  SL+Q  +QQLL QE+ +  L 
Sbjct: 862  EAPSFVKTTVKPNF-----RSLGR-RVGEKIKDIQKALASLSQAQIQQLLTQEYLSLNLG 915

Query: 280  EEEIMCH 260
             EEI+ H
Sbjct: 916  SEEIVLH 922

>APE2_YEAST (P32454) Aminopeptidase 2 (EC 3.4.11.-) (Aminopeptidase II) (AP-II)|
           (YscII)
          Length = 844

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -3

Query: 457 EVSQFFATRVKPSFERALKQSLERVRISARW 365
           E+ +FFAT+    F+++L QSL+ +   A+W
Sbjct: 813 EIKKFFATKSTKGFDQSLAQSLDTITSKAQW 843

>APE1_SCHPO (Q9USX1) Aminopeptidase 1 (EC 3.4.11.-) (Aminopeptidase I)|
          Length = 882

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 12/33 (36%), Positives = 23/33 (69%)
 Frame = -3

Query: 457 EVSQFFATRVKPSFERALKQSLERVRISARWID 359
           ++ +FFA +    +ERAL+QSL+ +  ++ +ID
Sbjct: 834 KIKEFFADKDTKLYERALQQSLDTISANSSFID 866

>CP27A_RAT (P17178) Cytochrome P450 27, mitochondrial precursor (EC|
           1.14.13.15) (Cytochrome P-450C27/25) (Sterol
           26-hydroxylase) (Sterol 27-hydroxylase) (Vitamin D(3)
           25-hydroxylase)
           (5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol
           27-hydroxylase)
          Length = 533

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = -1

Query: 171 LFPQNPESLIELLILRKEESIFPQTLSSERYKWRCVEED 55
           LFP+N + ++   ++ ++ S+FP+  S + ++W    ED
Sbjct: 420 LFPKNTQFVLCHYVVSRDPSVFPEPESFQPHRWLRKRED 458

>MYO1B_RAT (Q05096) Myosin Ib (Myosin I alpha) (MMI-alpha) (MMIa) (Myosin|
           heavy chain myr 1)
          Length = 1136

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
 Frame = -1

Query: 276 KRLCAMTA**MFWKGSVLTSSNI*FSGVP------SH*RYRLFPQNPESLIELLILRKEE 115
           K LC  T     WKG   +   + F+ +       S  R ++F +NP +L +L  LRK+ 
Sbjct: 646 KMLCKQTW--PHWKGPARSGVEVLFNELEIPVEEYSFGRSKIFIRNPRTLFQLEDLRKQR 703

Query: 114 SIFPQTLSSERYK-WRC 67
                TL  + Y+ W+C
Sbjct: 704 LEDLATLIQKIYRGWKC 720

>MYO1B_MOUSE (P46735) Myosin Ib (Myosin I alpha) (MMI-alpha) (MMIa) (MIH-L)|
          Length = 1107

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
 Frame = -1

Query: 276 KRLCAMTA**MFWKGSVLTSSNI*FSGVP------SH*RYRLFPQNPESLIELLILRKEE 115
           K LC  T     WKG   +   + F+ +       S  R ++F +NP +L +L  LRK+ 
Sbjct: 646 KMLCKQTW--PHWKGPARSGVEVLFNELEIPVEEHSFGRSKIFIRNPRTLFQLEDLRKQR 703

Query: 114 SIFPQTLSSERYK-WRC 67
                TL  + Y+ W+C
Sbjct: 704 LEDLATLIQKIYRGWKC 720

>MYO1B_HUMAN (O43795) Myosin Ib (Myosin I alpha) (MMI-alpha) (MMIa) (MYH-1c)|
          Length = 1136

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
 Frame = -1

Query: 276 KRLCAMTA**MFWKGSVLTSSNI*FSGVP------SH*RYRLFPQNPESLIELLILRKEE 115
           K LC  T     WKG   +   + F+ +       S  R ++F +NP +L +L  LRK+ 
Sbjct: 646 KMLCKQTW--PHWKGPARSGVEVLFNELEIPVEEYSFGRSKIFIRNPRTLFKLEDLRKQR 703

Query: 114 SIFPQTLSSERYK-WRC 67
                TL  + Y+ W+C
Sbjct: 704 LEDLATLIQKIYRGWKC 720


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,953,796
Number of Sequences: 219361
Number of extensions: 1073333
Number of successful extensions: 2334
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2334
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)