>Y4618_METAC (Q8THA2) UPF0313 protein MA4618|
          Length = 742

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
 Frame = -3

Query: 479 IPKKTDT---------SEGKAKRERDGTAGVSTAEQILKGGIDQAGAKNKSSEDG 342
           +PKK +T         SEGKA+ + +G AG+ST+    +  +  +  K K +E G
Sbjct: 47  VPKKVETGKKGKLGRKSEGKAEEKAEGKAGISTSTISERAVLKPSAGKRKKAESG 101

>TCOF_HUMAN (Q13428) Treacle protein (Treacher Collins syndrome protein)|
          Length = 1411

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = -3

Query: 476  PKKTDT-SEGKAKRERDGTAGVSTAEQILKGGIDQAGAKNKSSEDGSRG 333
            P+KT T S+GKAKR++   A     E+  KG +   GAK++  E+  +G
Sbjct: 1302 PEKTSTTSKGKAKRDK---ASGDVKEKKGKGSLGSQGAKDEPEEELQKG 1347

>PANX1_RAT (P60570) Pannexin-1|
          Length = 426

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 224 QLSRFQPSSFLWNPKAMMTVLCWMKILQ 307
           Q+S F PSSF W   A +   CW  + Q
Sbjct: 63  QISCFSPSSFSWRQAAFVDSYCWAAVQQ 90

>PANX1_PONPY (Q5REE3) Pannexin-1|
          Length = 426

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 224 QLSRFQPSSFLWNPKAMMTVLCWMKILQ 307
           Q+S F PSSF W   A +   CW  + Q
Sbjct: 63  QISCFSPSSFSWRQAAFVDSYCWAAVQQ 90

>PANX1_MOUSE (Q9JIP4) Pannexin-1|
          Length = 426

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 224 QLSRFQPSSFLWNPKAMMTVLCWMKILQ 307
           Q+S F PSSF W   A +   CW  + Q
Sbjct: 63  QISCFSPSSFSWRQAAFVDSYCWAAVQQ 90

>PANX1_HUMAN (Q96RD7) Pannexin-1|
          Length = 426

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 224 QLSRFQPSSFLWNPKAMMTVLCWMKILQ 307
           Q+S F PSSF W   A +   CW  + Q
Sbjct: 63  QISCFSPSSFSWRQAAFVDSYCWAAVQQ 90

>RADA_CERSY (O93748) DNA repair and recombination protein radA|
          Length = 369

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
 Frame = -3

Query: 455 EGKAKRERDGTAGVSTAEQILKGGIDQAGAKNKS-----SEDGSRGEPQRP 318
           + KAK + DG  GV     I   GID A A+ +      SE    GEP  P
Sbjct: 316 KSKAKAKADGPEGVDATPAIEPEGIDTAAAEPEDIGTIVSESADAGEPADP 366

>EXOC2_CAEEL (Q22706) Probable exocyst complex component 2 (Exocyst complex|
           component Sec5)
          Length = 884

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +3

Query: 291 G*RFCKWVKWPLRLSSAAVFTALIFSTSLINASFQNLFSCTHARCSIPL 437
           G +F KW   P  +S + +  +L  + SLI++  +N FS TH +  + L
Sbjct: 495 GDQFAKWPTVPADISRSNLQLSLKTTRSLISSLLENQFSLTHVQPLVEL 543

>SDK1_HUMAN (Q7Z5N4) Protein sidekick-1 precursor|
          Length = 2213

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +3

Query: 18   YKVYCPKSTSRLQSKLRSCPTTLPEF*VERKS-TSYVS*R*LTASFHPAGSGPNDKKKQL 194
            YK+Y  ++ S+ +++       LPE  V  K+ TS+       ++F+ AG GP    +Q 
Sbjct: 1737 YKIYYWEADSQNETEKMKV-LFLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPKSDPQQG 1795

Query: 195  YFHLLAVGFINFLAFN 242
              H  A G  +FLAF+
Sbjct: 1796 RTHQAAPGAPSFLAFS 1811

>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 974

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = -3

Query: 485 AKIPKKTDTSEGKAKRERDGTAGVSTAEQILKGGIDQAGAKNKSSEDGSRGEP 327
           AK+ KK    EG  K E  G  G             Q+ AKN S ++G+  EP
Sbjct: 224 AKLLKKLGEKEGSGKSEGKGRGG------------SQSEAKNASEKNGAASEP 264


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,339,947
Number of Sequences: 219361
Number of extensions: 1044556
Number of successful extensions: 2958
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2954
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)