Clone Name | rbastl02a10 |
---|---|
Clone Library Name | barley_pub |
>ASPG1_BACSU (P26900) L-asparaginase (EC 3.5.1.1) (L-asparagine amidohydrolase)| (L-ASNase) Length = 329 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +3 Query: 150 TEKLVVTLTWSIGLDADIPPLPNLHRTPI 236 TE +V L W++G +D+P + + TPI Sbjct: 295 TEAIVPKLMWALGQSSDLPVVKRIMETPI 323
>HEMH_YEAST (P16622) Ferrochelatase, mitochondrial precursor (EC 4.99.1.1)| (Protoheme ferro-lyase) (Heme synthetase) Length = 393 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = +1 Query: 118 PMMLTHAHLYKLRNWLLH*HGQSDWTQTFRRCQIYIGPLSFLSN-T*IIQGHLTDMQIQQ 294 P+ T H+ L L G+S++ F+RC+ G +F+ +++ HL Q Q Sbjct: 305 PIAFTSDHIETLHEIDLGVIGESEYKDKFKRCESLNGNQTFIEGMADLVKSHL---QSNQ 361 Query: 295 EHSSPSP*DLA 327 +S+ P D A Sbjct: 362 LYSNQLPLDFA 372
>BCSA_PSEFL (P58931) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 739 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +1 Query: 310 SP*DLAGTCFFASVCALAILFIVK 381 +P DL C FA+VC LA+L + K Sbjct: 55 APLDLYSQCLFAAVCFLAVLVLRK 78
>EPN4_HUMAN (Q14677) Epsin-4 (Epsin-related protein) (EpsinR) (Enthoprotin)| (Clathrin-interacting protein localized in the trans-Golgi region) (Clint) Length = 625 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +2 Query: 5 QHIHYYQTTTNASTQHVQT*HVSKGNNYVGMGTATKYT 118 +HIH Q T +T+H +T + SK + +G A YT Sbjct: 260 KHIHITQATETTTTRHKRTANPSK---TIDLGAAAHYT 294
>EPN4_MOUSE (Q99KN9) Epsin-4 (Epsin-related protein) (EpsinR) (Enthoprotin)| Length = 631 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +2 Query: 5 QHIHYYQTTTNASTQHVQT*HVSKGNNYVGMGTATKYT 118 +HIH Q T +T+H +T + SK + +G A YT Sbjct: 268 KHIHITQATETTTTRHKRTANPSK---TIDLGAAAHYT 302
>OPSD_MYRBE (P79798) Rhodopsin (Fragment)| Length = 349 Score = 27.3 bits (59), Expect = 9.1 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +3 Query: 165 VTLTWSIGLDADIPPL 212 VTLTW++GL +PPL Sbjct: 154 VTLTWAMGLACTVPPL 169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,695,050 Number of Sequences: 219361 Number of extensions: 1242024 Number of successful extensions: 2579 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2508 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2577 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)