>gb|AC155814.6| Mus musculus BAC clone RP24-137M22 from chromosome 8, complete sequence
          Length = 191336

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 344   cctctgtttgtgccctggctattctg 369
             ||||||||| ||||||||||||||||
Sbjct: 32847 cctctgtttttgccctggctattctg 32872

>gb|AC164611.3| Mus musculus BAC clone RP23-421C2 from chromosome 8, complete sequence
          Length = 188068

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 344    cctctgtttgtgccctggctattctg 369
              ||||||||| ||||||||||||||||
Sbjct: 187405 cctctgtttttgccctggctattctg 187430

>emb|CR848718.8| Zebrafish DNA sequence from clone DKEY-5N8 in linkage group 9, complete
             sequence
          Length = 253450

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     acatacattactatcaaacaa 29
             |||||||||||||||||||||
Sbjct: 24245 acatacattactatcaaacaa 24225

>emb|CR339052.6| Zebrafish DNA sequence from clone CH211-218E6 in linkage group 10,
             complete sequence
          Length = 127879

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    acaacaacaaatgcatctact 46
             |||||||||||||||||||||
Sbjct: 79081 acaacaacaaatgcatctact 79101

>gb|AC146224.2| Pan troglodytes BAC clone RP43-27B20 from 7, complete sequence
          Length = 141824

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 332    catgcttctttgcctctgttt 352
              |||||||||||||||||||||
Sbjct: 117727 catgcttctttgcctctgttt 117707

>emb|BX324119.5| Zebrafish DNA sequence from clone DKEYP-114G10 in linkage group 7,
             complete sequence
          Length = 60037

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 11    atacattactatcaaacaaca 31
             |||||||||||||||||||||
Sbjct: 40935 atacattactatcaaacaaca 40915

>gb|AC118556.2| Homo sapiens chromosome 1 clone RP11-421I6, complete sequence
          Length = 9890

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 332  catgcttctttgcctctgttt 352
            |||||||||||||||||||||
Sbjct: 9764 catgcttctttgcctctgttt 9784

>gb|AC099336.2| Homo sapiens chromosome 1 clone RP11-175B9, complete sequence
          Length = 159838

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 332    catgcttctttgcctctgttt 352
              |||||||||||||||||||||
Sbjct: 159100 catgcttctttgcctctgttt 159080

>emb|BX537292.5| Zebrafish DNA sequence from clone CH211-213E17 in linkage group 10,
              complete sequence
          Length = 189446

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 26     acaacaacaaatgcatctact 46
              |||||||||||||||||||||
Sbjct: 168186 acaacaacaaatgcatctact 168166

>gb|AF324892.1|AF324889S4 Homo sapiens myosin phosphatase target subunit 2 (MYPT2) gene, exons 11
              through 24, and complete cds
          Length = 150000

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 332    catgcttctttgcctctgttt 352
              |||||||||||||||||||||
Sbjct: 149633 catgcttctttgcctctgttt 149613

>gb|AC015973.2|AC015973 Homo sapiens BAC clone RP11-366C6 from Y, complete sequence
          Length = 171834

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 332    catgcttctttgcctctgttt 352
              |||||||||||||||||||||
Sbjct: 132625 catgcttctttgcctctgttt 132605

>emb|BX004815.6| Zebrafish DNA sequence from clone CH211-31O18 in linkage group 9,
              complete sequence
          Length = 172899

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 9      acatacattactatcaaacaa 29
              |||||||||||||||||||||
Sbjct: 100209 acatacattactatcaaacaa 100189

>gb|AC123917.25| Mus musculus chromosome 15, clone RP23-281P5, complete sequence
          Length = 184959

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 334   tgcttctttgcctctgtttgt 354
             |||||||||||||||||||||
Sbjct: 45874 tgcttctttgcctctgtttgt 45894

>gb|AC130659.11| Mus musculus chromosome 1, clone RP23-326C19, complete sequence
          Length = 172121

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   gtttttgtctaatacatgaa 256
             ||||||||||||||||||||
Sbjct: 71163 gtttttgtctaatacatgaa 71144

>gb|DQ165379.1| Dendroctonus rufipennis microsatellite 54 sequence
          Length = 170

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 336 cttctttgcctctgtttgtg 355
           ||||||||||||||||||||
Sbjct: 43  cttctttgcctctgtttgtg 24

>gb|AC126929.3| Mus musculus BAC clone RP24-465A20 from chromosome 17, complete sequence
          Length = 168712

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     tactatcaaacaacaacaaa 36
              ||||||||||||||||||||
Sbjct: 113956 tactatcaaacaacaacaaa 113937

>gb|AC147877.10| Medicago truncatula clone mth2-9b13, complete sequence
          Length = 122251

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     caacacatacattactatcaaaca 28
             ||||||||||| ||||||||||||
Sbjct: 77944 caacacatacactactatcaaaca 77921

>gb|AC162295.3| Mus musculus chromosome 1, clone RP24-232K22, complete sequence
          Length = 180957

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   gtttttgtctaatacatgaa 256
             ||||||||||||||||||||
Sbjct: 22892 gtttttgtctaatacatgaa 22911

>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    tttcaaaagggaacaactat 88
             ||||||||||||||||||||
Sbjct: 30963 tttcaaaagggaacaactat 30982

>emb|BX649638.19| Zebrafish DNA sequence from clone CH211-64M24 in linkage group 18,
            complete sequence
          Length = 185541

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   catacattactatcaaacaa 29
            ||||||||||||||||||||
Sbjct: 4193 catacattactatcaaacaa 4174

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 49      acatgttcagacttagcatg 68
               ||||||||||||||||||||
Sbjct: 7797703 acatgttcagacttagcatg 7797684

>dbj|AP005912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0064I23
          Length = 161865

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    acatgttcagacttagcatg 68
             ||||||||||||||||||||
Sbjct: 44906 acatgttcagacttagcatg 44887

>emb|AL672080.11| Zebrafish DNA sequence from clone BUSM1-202M12 in linkage group 18,
            complete sequence
          Length = 46517

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   catacattactatcaaacaa 29
            ||||||||||||||||||||
Sbjct: 7051 catacattactatcaaacaa 7032

>emb|X90580.1|SCNUP188 S.cerevisiae DNA for Nup188 gene
          Length = 5516

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   ttactatcaaacaacaacaa 35
            ||||||||||||||||||||
Sbjct: 1794 ttactatcaaacaacaacaa 1813

>emb|CR385027.12| Zebrafish DNA sequence from clone DKEY-13A17 in linkage group 9,
             complete sequence
          Length = 228454

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   ctgatatgcaaatccagcag 294
             ||||||||||||||||||||
Sbjct: 14466 ctgatatgcaaatccagcag 14485

>emb|X80835.1|SC9514 S.cerevisiae chromosome XIII cosmid 9514
          Length = 13841

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   ttactatcaaacaacaacaa 35
            ||||||||||||||||||||
Sbjct: 5671 ttactatcaaacaacaacaa 5652

>gb|U47107.1|SCU47107 Saccharomyces cerevisiae major nucleoporin (NUP188) gene, complete
            cds
          Length = 5839

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   ttactatcaaacaacaacaa 35
            ||||||||||||||||||||
Sbjct: 2108 ttactatcaaacaacaacaa 2127


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,354,223
Number of Sequences: 3902068
Number of extensions: 4354223
Number of successful extensions: 83373
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83309
Number of HSP's gapped (non-prelim): 64
length of query: 383
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 361
effective length of database: 17,147,199,772
effective search space: 6190139117692
effective search space used: 6190139117692
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)