>POLG_BVDVN (P19711) Genome polyprotein [Contains: N-terminal protease (EC|
           3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C;
           E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1
           (gp33); Envelope glycoprotein E2 (gp55); p7;
           Nonstructural protein 2
          Length = 3988

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 119 NIASVCSEGNCRVCNSFSPLCGYYTMPG 36
           N+AS+   G+CR  NS  P+ G Y  PG
Sbjct: 59  NLASLPKRGDCRSGNSRGPVSGIYLKPG 86

>POLG_BVDVC (Q96662) Genome polyprotein [Contains: N-terminal protease (EC|
           3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C;
           E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1
           (gp33); Envelope glycoprotein E2 (gp55); p7;
           Nonstructural protein 2
          Length = 3907

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 119 NIASVCSEGNCRVCNSFSPLCGYYTMPG 36
           N+AS+   G+CR  NS  P+ G Y  PG
Sbjct: 59  NLASLPKRGDCRSGNSKGPVSGIYLKPG 86

>ZCH11_HUMAN (Q5TAX3) Zinc finger CCHC domain-containing protein 11|
          Length = 1644

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +2

Query: 215  GAAGPEIVNYT*VITSEKSASEPFPFPPSQWPWGYNRLKRKHGNSHRQKFQPHLAQ 382
            G + P     T  I  E +    FP  P+ WP+G ++     GN+  Q  +P   Q
Sbjct: 1567 GNSEPGFRGLTPPIPWEHAPRPHFPLVPASWPYGLHQNFMHQGNARFQPNKPFYTQ 1622

>POLG_BVDVS (Q01499) Genome polyprotein [Contains: N-terminal protease (EC|
           3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C;
           E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1
           (gp33); Envelope glycoprotein E2 (gp55); p7;
           Nonstructural protein 2
          Length = 3898

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 119 NIASVCSEGNCRVCNSFSPLCGYYTMPG 36
           ++AS+   G+CR  NS  P+ G Y  PG
Sbjct: 59  SLASLPKRGDCRSGNSKGPVSGIYLKPG 86

>SULA_SERMA (P08845) Cell division inhibitor|
          Length = 168

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 288 LFPPHSGHGDTTD*KESTGTAIGKNSSLI 374
           L+ PH GHG  T    +  T IGK + LI
Sbjct: 6   LYQPHFGHGSYTTRNVAKNTDIGKENGLI 34


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,158,771
Number of Sequences: 219361
Number of extensions: 1420239
Number of successful extensions: 3129
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3129
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)