>gb|AC131977.8| Mus musculus chromosome 10, clone RP24-151B6, complete sequence
          Length = 146010

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 71     aagaattacagaccctacaattcc 94
              ||||||||||||||||||||||||
Sbjct: 105551 aagaattacagaccctacaattcc 105574

>gb|AC102593.8| Mus musculus chromosome 10, clone RP23-341M12, complete sequence
          Length = 212025

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 71     aagaattacagaccctacaattcc 94
              ||||||||||||||||||||||||
Sbjct: 146028 aagaattacagaccctacaattcc 146005

>emb|AL356292.21| Human DNA sequence from clone RP11-363I22 on chromosome 1 Contains the
             5' end of the gene for GPP34-related protein (GPP34R), the
             gene for a novel protein (DKFZp434A1315), the CTSS gene
             for cathepsin S, a pseudogene similar to part of short
             coiled-coil protein (SCOC) and the 3' end of the CTSK gene
             for cathepsin K (pycnodysostosis), complete sequence
          Length = 154068

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 281   ccttttccttttcccccctca 301
             |||||||||||||||||||||
Sbjct: 95476 ccttttccttttcccccctca 95456

>gb|AC159427.1| Trypanosoma brucei chromosome 8 clone RPCI93-27P2, complete sequence
          Length = 146393

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  ttttccttttcccccctcac 302
            ||||||||||||||||||||
Sbjct: 9574 ttttccttttcccccctcac 9555

>gb|AC169697.1| Rhesus Macaque  BAC CH250-38L23 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 154876

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   attacatcagagaagagtgc 273
             ||||||||||||||||||||
Sbjct: 52517 attacatcagagaagagtgc 52498

>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence
          Length = 1590432

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    cttttccttttcccccctca 301
              ||||||||||||||||||||
Sbjct: 114052 cttttccttttcccccctca 114033

>gb|AC159449.1| Trypanosoma brucei chromosome 4 clone RPCI93-5D20, complete sequence
          Length = 162975

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    cttttccttttcccccctca 301
              ||||||||||||||||||||
Sbjct: 114052 cttttccttttcccccctca 114033

>ref|XM_587300.2| PREDICTED: Bos taurus similar to actin related protein 2/3 complex,
           subunit 4 (LOC539459), mRNA
          Length = 1711

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 274 atcagaaccttttccttttc 293
           ||||||||||||||||||||
Sbjct: 491 atcagaaccttttccttttc 472

>gb|AC141107.5| Medicago truncatula clone mth2-34a12, complete sequence
          Length = 142659

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   acaacagattgaaaagaaag 337
             ||||||||||||||||||||
Sbjct: 41664 acaacagattgaaaagaaag 41683

>emb|AL513366.11| Human DNA sequence from clone CTD-2522E6 on chromosome X Contains the
             RGN gene for regucalcin (senescence marker protein-30)
             (RC, SMP30), the gene for neuronal protein 17.3 (P17.3),
             the RBM10 gene for RNA binding motif protein 10 (MGC997,
             MGC1132, DXS8237E, KIAA0122), an inositol
             1,3,4-triphosphate 5/6 kinase (ITPK1) pseudogene, the UBE1
             gene for ubiquitin-activating enzyme E1 (A1S9T and BN75
             temperature sensitivity complementing) (A1S9, A1ST, GXP1,
             A1S9T, UBE1X, MGC4781), the 5' UTR of the PCTK1 gene for
             PCTAIRE protein kinase 1 and five CpG islands, complete
             sequence
          Length = 145456

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   ttcccccctcacagtggcca 310
             ||||||||||||||||||||
Sbjct: 26631 ttcccccctcacagtggcca 26612

>gb|AC015933.9| Homo sapiens chromosome 18, clone CTD-2023G8, complete sequence
          Length = 249021

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   attacatcagagaagagtgc 273
             ||||||||||||||||||||
Sbjct: 45095 attacatcagagaagagtgc 45076

>gb|DQ397830.1| Cenarchaeum symbiosum clone C01C10, complete sequence
          Length = 40511

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 426   cgtaaccagcagcgatgcca 445
             ||||||||||||||||||||
Sbjct: 21439 cgtaaccagcagcgatgcca 21420

>gb|AC110015.5| Homo sapiens chromosome 18, clone RP11-104H13, complete sequence
          Length = 168389

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    attacatcagagaagagtgc 273
              ||||||||||||||||||||
Sbjct: 104649 attacatcagagaagagtgc 104630

>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 429     aaccagcagcgatgccaata 448
               ||||||||||||||||||||
Sbjct: 4539936 aaccagcagcgatgccaata 4539917

>emb|BX546474.8| Zebrafish DNA sequence from clone DKEY-120L3 in linkage group 17,
             complete sequence
          Length = 179463

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 276   cagaaccttttccttttcccccct 299
             ||||||||||||||||||| ||||
Sbjct: 28238 cagaaccttttccttttcctccct 28215

>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    tcagaaccttttccttttcc 294
              ||||||||||||||||||||
Sbjct: 227801 tcagaaccttttccttttcc 227820

>gb|AC008218.5| Drosophila melanogaster, chromosome 3R, region 99B-99B, BAC clone
             BACR10L12, complete sequence
          Length = 178791

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   ccttttccttttcccccctc 300
             ||||||||||||||||||||
Sbjct: 10001 ccttttccttttcccccctc 9982

>gb|AC154201.2| Mus musculus BAC clone RP24-83I8 from chromosome 16, complete sequence
          Length = 172923

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   gaagagtgcatcagaacctt 284
             ||||||||||||||||||||
Sbjct: 80636 gaagagtgcatcagaacctt 80617

>gb|AC007856.7|AC007856 Drosophila melanogaster, chromosome 3R, region 99B-99B, BAC clone
             BACR05L03, complete sequence
          Length = 175124

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   ccttttccttttcccccctc 300
             ||||||||||||||||||||
Sbjct: 58184 ccttttccttttcccccctc 58165

>gb|AC097523.4| Homo sapiens BAC clone RP11-597P14 from 2, complete sequence
          Length = 108711

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   ccttttccttttcccccctc 300
             ||||||||||||||||||||
Sbjct: 20636 ccttttccttttcccccctc 20655

>gb|AC096670.1| Homo sapiens BAC clone RP11-438K19 from 2, complete sequence
          Length = 181497

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    aaaagaattacagaccctac 88
             ||||||||||||||||||||
Sbjct: 68238 aaaagaattacagaccctac 68257

>gb|AC055817.12| Mus musculus, clone RP23-154I7, complete sequence
          Length = 203805

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   agccataggcaaaaattcca 366
             ||||||||||||||||||||
Sbjct: 42411 agccataggcaaaaattcca 42392

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 27      ccacgaacagcccggcatag 46
               ||||||||||||||||||||
Sbjct: 5190897 ccacgaacagcccggcatag 5190878

>gb|AC009888.1|AC009888 Drosophila melanogaster, chromosome 3R, region 99A7-99B5, BAC clones
              BACR48K01 and BACR48O23, complete sequence
          Length = 311043

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    ccttttccttttcccccctc 300
              ||||||||||||||||||||
Sbjct: 267305 ccttttccttttcccccctc 267286

>gb|AE003770.2| Drosophila melanogaster chromosome 3R, section 108 of 118 of the
             complete sequence
          Length = 224264

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   ccttttccttttcccccctc 300
             ||||||||||||||||||||
Sbjct: 42249 ccttttccttttcccccctc 42230

>gb|AC147971.2| Gallus gallus BAC clone CH261-79K6 from chromosome unknown, complete
              sequence
          Length = 229445

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    cttttccttttcccccctca 301
              ||||||||||||||||||||
Sbjct: 122128 cttttccttttcccccctca 122109

>emb|AL672274.7| Mouse DNA sequence from clone RP23-351G20 on chromosome X, complete
             sequence
          Length = 189982

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   agccataggcaaaaattcca 366
             ||||||||||||||||||||
Sbjct: 61180 agccataggcaaaaattcca 61199


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,733,505
Number of Sequences: 3902068
Number of extensions: 3733505
Number of successful extensions: 71794
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71691
Number of HSP's gapped (non-prelim): 103
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)