>COPG2_MOUSE (Q9QXK3) Coatomer subunit gamma-2 (Gamma-2 coat protein) (Gamma-2|
           COP)
          Length = 871

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 24/60 (40%), Positives = 31/60 (51%)
 Frame = -1

Query: 468 PCEGTGVVSSNARSHVCLLSGVYIGGVKVLVRLSFGLSGPKEVAMRLAVRSDDPEVSDKI 289
           PCE +  V  N  SH   L+GVY GG  +LVR    L+    V M++ VRS +    D I
Sbjct: 809 PCERSDKVPENKNSHSLYLAGVYRGGYDLLVRSRLALA--DGVTMQVTVRSKERTPVDVI 866

>COPG_CAEEL (Q22498) Probable coatomer subunit gamma (Gamma-coat protein)|
           (Gamma-COP)
          Length = 870

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = -1

Query: 468 PCEGTGVVSSNARSHVCLLSGVYIGGVKVLVRLSFGLS-GPKEVAMRLAVRSDDPEVSDK 292
           PCE +  V      H   LSGV+ GG  VL + +  +      +AM + ++S++P V+D 
Sbjct: 805 PCERSDRVPEGKTQHTVFLSGVFRGGYDVLSKATVAVDPNDNSIAMNIIIKSNEPLVADL 864

Query: 291 I 289
           +
Sbjct: 865 V 865

>COPG2_HUMAN (Q9UBF2) Coatomer subunit gamma-2 (Gamma-2 coat protein) (Gamma-2|
           COP)
          Length = 871

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 22/60 (36%), Positives = 31/60 (51%)
 Frame = -1

Query: 468 PCEGTGVVSSNARSHVCLLSGVYIGGVKVLVRLSFGLSGPKEVAMRLAVRSDDPEVSDKI 289
           PCE +  V  N  SH   L+G++ GG  +LVR    L+    V M++ VRS +    D I
Sbjct: 809 PCERSDKVPENKNSHSLYLAGIFRGGYDLLVRSRLALA--DGVTMQVTVRSKERTPVDVI 866

>COPG_BOVIN (P53620) Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)|
          Length = 874

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = -1

Query: 468 PCEGTGVVSSNARSHVCLLSGVYIGGVKVLVRLSFGLSGPKEVAMRLAVRSDD 310
           PCE +  V  N  +H  LL+GV+ GG  +LVR    L     V M++  RS +
Sbjct: 812 PCERSDKVPDNKNTHTLLLAGVFRGGHDILVRSRLLLL--DTVTMQVTARSSE 862

>COPG_HUMAN (Q9Y678) Coatomer subunit gamma (Gamma-coat protein) (Gamma-COP)|
          Length = 874

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -1

Query: 468 PCEGTGVVSSNARSHVCLLSGVYIGGVKVLVR 373
           PCE +  V  N  +H  LL+GV+ GG  +LVR
Sbjct: 812 PCERSDKVPDNKNTHTLLLAGVFRGGHDILVR 843

>PHF15_HUMAN (Q9NQC1) PHD finger protein 15|
          Length = 576

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 3   SRHACISIHHNIFHLRQSMLKNQLCNERLSSS 98
           ++HA   +   IFHL+  +++  LC   LS+S
Sbjct: 277 TKHAICKLQEQIFHLQMKLIEQDLCRAGLSTS 308

>RS5_IDILO (Q5QXW2) 30S ribosomal protein S5|
          Length = 166

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 12/63 (19%)
 Frame = -1

Query: 462 EGTGVVSSNARSHVCLLSGVY------------IGGVKVLVRLSFGLSGPKEVAMRLAVR 319
           EGTG+++  A   V  +SGV+            I  V+  ++   G+  P++VA +  +R
Sbjct: 101 EGTGIIAGGAMRAVLEVSGVHNVLSKAYGSTNPINVVRATIKALNGMKSPEQVAAKRGLR 160

Query: 318 SDD 310
            D+
Sbjct: 161 VDE 163

>HN_PI3HW (P12565) Hemagglutinin-neuraminidase (EC 3.2.1.18)|
          Length = 572

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
 Frame = +2

Query: 299 LTSGSSDLTASLIATSLGPLSPNDNLTRTFTPPIYTP----DSRHTCDLALLDT 448
           +T G  D+  S     +G ++ N +L     P I       D+R +C LALL+T
Sbjct: 210 ITRGCQDIGKSYQVLQIGTITVNSDLVPDLNPRISHTFNINDNRKSCSLALLNT 263

>PHF12_HUMAN (Q96QT6) PHD finger protein 12 (PHD factor 1) (Pf1)|
          Length = 1004

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/60 (25%), Positives = 24/60 (40%)
 Frame = +2

Query: 287 WILSLTSGSSDLTASLIATSLGPLSPNDNLTRTFTPPIYTPDSRHTCDLALLDTTPVPSH 466
           W+ S+ +    +   L A  +     ++   +    P+   DS  T  L   D TP PSH
Sbjct: 432 WLCSVVALQCSILKHLSAKQMPSHWDSEQTEKADIKPVIVTDSSVTTSLQTADKTPTPSH 491

>ERA_DEIRA (Q9RWM0) GTP-binding protein era homolog|
          Length = 311

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +2

Query: 308 GSSDLTASLIATSLGPLSPNDNLTRTFTPPIYTPDSRHTCDLALLDT 448
           G S L  + + T + P SP    TR     IYT D+R    L  +DT
Sbjct: 29  GKSTLLNAFLGTKVAPTSPRPQTTRRGVRGIYTLDNR---QLIFVDT 72


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,016,906
Number of Sequences: 219361
Number of extensions: 1216354
Number of successful extensions: 3177
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3177
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)