>SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,|
            arginine/serine-rich 2-interacting protein)
            (SC35-interacting protein 1) (CTD-associated SR protein
            11) (Splicing regulatory protein 129) (SRrp129)
            (NY-REN-40 antigen)
          Length = 1148

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = -2

Query: 461  WRQGNMSRDAFKMIVRKTVDKVSSSVPGNHIPKTPAKIRQYVQSSQRKVTKLVMGYVDKY 282
            ++  +++++ +K IVRK VDKV  S  G              + +  KV  LV  YVDKY
Sbjct: 1080 YQNKDITKEEYKEIVRKAVDKVCHSKSG--------------EVNSTKVANLVKAYVDKY 1125

>CP242_PIG (P79402) Cytochrome P450 2C42 (EC 1.14.14.1) (CYPIIC42) (Fragment)|
          Length = 327

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = -3

Query: 118 EGTTVLESCV*TSVSYSVKLLPSPVLFVVKHFVDISFPF 2
           +GTT+L S   TSV Y  K  P+P +F   HF+D S  F
Sbjct: 220 KGTTILTSL--TSVLYDCKAFPNPEVFDPGHFLDESGNF 256

>RS17E_SULAC (Q4JAX5) 30S ribosomal protein S17e|
          Length = 82

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = -2

Query: 452 GNMSRDAFKMIVRKTVDKVSSSVPGNHIPKTPAKIRQYVQSSQRKVTKLVMGYVDKYVKL 273
           GN+     K + R+  DK        +       + +YV  S +KV   + GY+ +YVK+
Sbjct: 2   GNVYTKDIKRVARELYDKFKDQASDKY-DDNKKLVDEYVNVSSKKVKNRIAGYLTRYVKI 60

>CR1EA_BACTX (Q57458) Pesticidal crystal protein cry1Ea (Insecticidal|
           delta-endotoxin CryIE(a)) (Crystaline entomocidal
           protoxin) (133 kDa crystal protein)
          Length = 1171

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
 Frame = +3

Query: 33  TTNRTGLGSNLTEYETDV*THDS----NTVVPSVLTRIPSCKG 149
           T  R+   +N+T   T V TH S    NT+ P ++T+IP  KG
Sbjct: 430 TLTRSLYNTNITSLPTFVWTHHSATNTNTINPDIITQIPLVKG 472

>RS17E_SULSO (Q980K7) 30S ribosomal protein S17e|
          Length = 79

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = -2

Query: 452 GNMSRDAFKMIVRKTVDKVSSSVPGNHIPKTPAKIRQYVQSSQRKVTKLVMGYVDKYVKL 273
           GN+     K IV++  D+    +  ++       IR YV    +KV   + GY+ +Y K+
Sbjct: 2   GNIYTKDIKRIVKEIYDRYKDEIKDDYNTNKQIVIR-YVDVKSKKVRNRIAGYLTRYYKI 60

>CP2CJ_HUMAN (P33261) Cytochrome P450 2C19 (EC 1.14.13.80) ((R)-limonene|
           6-monooxygenase) (EC 1.14.13.48) ((S)-limonene
           6-monooxygenase) (EC 1.14.13.49) ((S)-limonene
           7-monooxygenase) (CYPIIC19) (P450-11A) (Mephenytoin
           4-hydroxylase) (CYPIIC17) (P450-254C
          Length = 490

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -3

Query: 118 EGTTVLESCV*TSVSYSVKLLPSPVLFVVKHFVD 17
           +GTT+L S   TSV +  K  P+P +F  +HF+D
Sbjct: 383 KGTTILTSL--TSVLHDNKEFPNPEMFDPRHFLD 414

>SYA_LEGPA (Q5X4B7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 860

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
 Frame = -3

Query: 232 AVVEVVKNTDSGGKPCIVLLEHLFA*ESPLQEGILVSTEGT-TVLESCV*TSVSYSVKL- 59
           A+ ++ +N D       V+ +H+ +    + +G+L S EG   VL   +  +V +  KL 
Sbjct: 255 AIAQLGQNIDLNHTSLKVIADHIRSCSFLIVDGVLPSNEGRGYVLRRIIRRAVRHGNKLG 314

Query: 58  LPSPVLF-VVKHFVDI 14
           LPSP  F +V+  +D+
Sbjct: 315 LPSPFFFKLVQPLIDV 330

>CP239_MOUSE (P56656) Cytochrome P450 2C39 (EC 1.14.14.1) (CYPIIC39)|
          Length = 490

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -3

Query: 118 EGTTVLESCV*TSVSYSVKLLPSPVLFVVKHFVDISFPF 2
           +GTTV+ S   TSV +  K  P+P LF   HF+D +  F
Sbjct: 383 KGTTVVTSL--TSVLHDSKEFPNPELFDPGHFLDANGNF 419


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,785,788
Number of Sequences: 219361
Number of extensions: 1085799
Number of successful extensions: 2678
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2677
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)