>IF2_LACAC (Q5FJN6) Translation initiation factor IF-2|
          Length = 877

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = +2

Query: 2   KSKDVAAANKERLEFIKTTRNNPPAFKLLQFFKESVRAWESRIHR 136
           +S D A  NKER    K+    P A  LLQ FK+  RA E +++R
Sbjct: 102 RSSDRARDNKER--DAKSNTGRPKAAALLQQFKQKQRAEEGQLNR 144

>P85B_BOVIN (P23726) Phosphatidylinositol 3-kinase regulatory beta subunit|
           (PI3-kinase p85-beta subunit) (PtdIns-3-kinase p85-beta)
          Length = 724

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 425 RRHNIPGTSDHLIFVPISCVRSGHVSRAPRPLPISVWCRPPTP 297
           +R + PGT    +  P++  R G   R PRPLP      PP P
Sbjct: 66  QRGDFPGTYVEFLG-PVALARPGPRPRGPRPLPARPRDGPPEP 107

>NCAP_CVTNC (Q9PZ49) Nucleocapsid protein (N structural protein) (NC)|
          Length = 409

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = +3

Query: 249 LHRYRFPRGTYRNISSWRRWPAPDGDR*RTGSSRDVSGAHARDRYEDEMIGGS 407
           LHR R  R T  + ++  R P+ DG R R   S D   A A    +D+   GS
Sbjct: 160 LHRGRSGRSTAASSAASSRAPSRDGSRGRRSGSEDDLIARAAKIIQDQQKKGS 212


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,918,456
Number of Sequences: 219361
Number of extensions: 1412345
Number of successful extensions: 3427
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3427
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)