ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl02a01 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 120 bits (301), Expect = 2e-27 Identities = 57/77 (74%), Positives = 61/77 (79%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHT 301 DTP WTSD KALE FKRF +L IE +V MN DP+LKNR GPAKFPYMLLYPNT DH Sbjct: 786 DTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHK 845 Query: 300 GQAEGLTARGIPNSISI 250 G A GLTA+GIPNSISI Sbjct: 846 GAAAGLTAKGIPNSISI 862
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 117 bits (294), Expect = 1e-26 Identities = 57/77 (74%), Positives = 60/77 (77%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHT 301 DTP WTSDAKALEAFKRFGA+L IE +V AMN DP KNR GP FPY LLYPNT D Sbjct: 794 DTPEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLK 853 Query: 300 GQAEGLTARGIPNSISI 250 G A GL+ARGIPNSISI Sbjct: 854 GDAAGLSARGIPNSISI 870
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 114 bits (285), Expect = 1e-25 Identities = 55/77 (71%), Positives = 62/77 (80%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHT 301 DTPAWTSDA+ALEAF+RF +L IE +V MN D LKNR GPA+FPYMLLYPNT D T Sbjct: 790 DTPAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVT 849 Query: 300 GQAEGLTARGIPNSISI 250 G A G+TA+GIPNSISI Sbjct: 850 GAAAGITAKGIPNSISI 866
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 113 bits (282), Expect = 3e-25 Identities = 54/77 (70%), Positives = 60/77 (77%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHT 301 DTP WTSD KALEAFKRF +L IE +V MN DP LKNR GPA FPY L++PNT D+ Sbjct: 787 DTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNK 846 Query: 300 GQAEGLTARGIPNSISI 250 G AEG+TARGIPNSISI Sbjct: 847 GAAEGITARGIPNSISI 863
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 105 bits (262), Expect = 6e-23 Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 1/78 (1%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHT 301 DTP WTSDAKAL+AFKRFG++L IE ++ MN + LKNR GP K PYMLLYPNT D T Sbjct: 800 DTPEWTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVT 859 Query: 300 GQ-AEGLTARGIPNSISI 250 + +GLTA GIPNSISI Sbjct: 860 KEKGQGLTAMGIPNSISI 877
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 96.7 bits (239), Expect = 3e-20 Identities = 48/77 (62%), Positives = 56/77 (72%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHT 301 +TP WT+D KALEAFKRFG+KL GIE ++ A NSDP L+NRTGP + PY LL H Sbjct: 794 ETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLL------HR 847 Query: 300 GQAEGLTARGIPNSISI 250 EGLT +GIPNSISI Sbjct: 848 SSEEGLTFKGIPNSISI 864
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 89.7 bits (221), Expect = 4e-18 Identities = 44/77 (57%), Positives = 56/77 (72%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHT 301 D P WTSD+KAL+AF++FG KL+ IE+++A N+D L NR GP + PY LL+PN Sbjct: 796 DNPHWTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPN----- 850 Query: 300 GQAEGLTARGIPNSISI 250 +EGLT RGIPNSISI Sbjct: 851 --SEGLTCRGIPNSISI 865
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 89.7 bits (221), Expect = 4e-18 Identities = 45/77 (58%), Positives = 55/77 (71%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHT 301 D P WTSD +ALEAFK+FG KL IEK++ N+D +L+NR GP + PY LLYP++ Sbjct: 791 DNPNWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSS---- 846 Query: 300 GQAEGLTARGIPNSISI 250 EGLT RGIPNSISI Sbjct: 847 --KEGLTFRGIPNSISI 861
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 89.4 bits (220), Expect = 5e-18 Identities = 47/73 (64%), Positives = 52/73 (71%) Frame = -2 Query: 468 WTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHTGQAE 289 WTSDA LEAFKRFG KLE IEK++ N D L+NR GPAK PY LLYP++ E Sbjct: 787 WTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPSS------EE 840 Query: 288 GLTARGIPNSISI 250 GLT RGIPNSISI Sbjct: 841 GLTFRGIPNSISI 853
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 87.0 bits (214), Expect = 2e-17 Identities = 44/77 (57%), Positives = 54/77 (70%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHT 301 D P WTSD +ALEAFKRFG KL IE +++ N+D +L+NR GP + PY LL P++ Sbjct: 787 DNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSS---- 842 Query: 300 GQAEGLTARGIPNSISI 250 EGLT RGIPNSISI Sbjct: 843 --KEGLTFRGIPNSISI 857
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 87.0 bits (214), Expect = 2e-17 Identities = 43/77 (55%), Positives = 52/77 (67%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHT 301 D P WT++ KAL+AFKRFG KL+ IE+++ N D L+NR GP K PY +L P D Sbjct: 791 DNPNWTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCED-- 848 Query: 300 GQAEGLTARGIPNSISI 250 EGLT RGIPNSISI Sbjct: 849 ---EGLTFRGIPNSISI 862
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 86.3 bits (212), Expect = 4e-17 Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 1/78 (1%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLK-NRTGPAKFPYMLLYPNTPDH 304 D P WTSD+KAL+AF++FG KL+ IE+++ N+DP L+ NR GP + PY LLYP++ Sbjct: 768 DNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSS--- 824 Query: 303 TGQAEGLTARGIPNSISI 250 EGLT RGIPNSISI Sbjct: 825 ---EEGLTFRGIPNSISI 839
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 82.8 bits (203), Expect = 4e-16 Identities = 41/77 (53%), Positives = 54/77 (70%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHT 301 + P WTSD+KAL+AF++FG KL IE ++ N+DP L +R GP + PY LL+P++ Sbjct: 794 ENPHWTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSS---- 849 Query: 300 GQAEGLTARGIPNSISI 250 EGLT RGIPNSISI Sbjct: 850 --KEGLTFRGIPNSISI 864
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 81.3 bits (199), Expect = 1e-15 Identities = 41/73 (56%), Positives = 50/73 (68%) Frame = -2 Query: 468 WTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHTGQAE 289 WT+D+ EAFKRFG KL IE+++ N+D L+NR GP K PY LLYP++ E Sbjct: 800 WTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPSS------EE 853 Query: 288 GLTARGIPNSISI 250 GLT RGIPNSISI Sbjct: 854 GLTCRGIPNSISI 866
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 79.3 bits (194), Expect = 5e-15 Identities = 41/67 (61%), Positives = 47/67 (70%) Frame = -2 Query: 468 WTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHTGQAE 289 WTSDA LEAFKRFG KL IEK++ N+D L+NRTGPAK PY LLYP++ E Sbjct: 681 WTSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPSS------EE 734 Query: 288 GLTARGI 268 GLT RGI Sbjct: 735 GLTFRGI 741
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 76.3 bits (186), Expect = 4e-14 Identities = 37/77 (48%), Positives = 51/77 (66%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHT 301 D+ W ++ +ALEAF++FG K++ IEK + N D LKNRTG K PY LL+P++ Sbjct: 789 DSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEG-- 846 Query: 300 GQAEGLTARGIPNSISI 250 G+T RGIPNS+SI Sbjct: 847 ----GVTGRGIPNSVSI 859
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 75.9 bits (185), Expect = 5e-14 Identities = 38/77 (49%), Positives = 48/77 (62%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHT 301 ++P WT D + L AF+RFG KL IEKQ+ N + L NRTGP PY LL+P + Sbjct: 790 ESPEWTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFPTSEG-- 847 Query: 300 GQAEGLTARGIPNSISI 250 GLT +GIPNS+SI Sbjct: 848 ----GLTGKGIPNSVSI 860
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 75.9 bits (185), Expect = 5e-14 Identities = 38/77 (49%), Positives = 47/77 (61%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHT 301 ++P WT D + L AF RFG KL IEKQ+ N D L NR+GP PY LL+P + Sbjct: 791 ESPEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEG-- 848 Query: 300 GQAEGLTARGIPNSISI 250 GLT +GIPNS+SI Sbjct: 849 ----GLTGKGIPNSVSI 861
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 73.9 bits (180), Expect = 2e-13 Identities = 37/77 (48%), Positives = 47/77 (61%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHT 301 D+ WT D + L AF+RFG L IE ++ MNS KNR+GP PY LL+P + Sbjct: 789 DSIEWTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLLFPTS---- 844 Query: 300 GQAEGLTARGIPNSISI 250 EGLT +GIPNS+SI Sbjct: 845 --EEGLTGKGIPNSVSI 859
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 60.5 bits (145), Expect = 2e-09 Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Frame = -2 Query: 483 HDTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDH 304 H+ PAWT D +AF+ F I +QV N+DP KNR G PY+LL P+ D Sbjct: 855 HEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDP 914 Query: 303 TG----QAEGLTARGIPNSISI 250 T + + GIPNSISI Sbjct: 915 TDGDPTDEKMVMEMGIPNSISI 936
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 59.7 bits (143), Expect = 4e-09 Identities = 28/74 (37%), Positives = 43/74 (58%) Frame = -2 Query: 471 AWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHTGQA 292 AWT+D AL A + F A + E+++ N+DP +NR G PY L+ P++ Sbjct: 832 AWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSS------G 885 Query: 291 EGLTARGIPNSISI 250 G+T RG+PNS++I Sbjct: 886 PGITCRGVPNSVTI 899
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 55.8 bits (133), Expect = 6e-08 Identities = 30/75 (40%), Positives = 42/75 (56%) Frame = -2 Query: 474 PAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHTGQ 295 PAW ++ AF++F +L+ E + N++P+ KNR G PY LL P + Sbjct: 828 PAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFS------ 881 Query: 294 AEGLTARGIPNSISI 250 G+T RGIPNSISI Sbjct: 882 EPGVTGRGIPNSISI 896
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 55.8 bits (133), Expect = 6e-08 Identities = 30/73 (41%), Positives = 40/73 (54%) Frame = -2 Query: 468 WTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHTGQAE 289 WT+D A+ A F A + E+ + N+D KNR G PY LL P++P Sbjct: 852 WTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSP------P 905 Query: 288 GLTARGIPNSISI 250 G+T RG+PNSISI Sbjct: 906 GVTCRGVPNSISI 918
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 54.3 bits (129), Expect = 2e-07 Identities = 31/76 (40%), Positives = 39/76 (51%) Frame = -2 Query: 477 TPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHTG 298 T W SDA A+ F A+L+ IE + N D +LKNR G PY L+ P + Sbjct: 855 TRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD---- 910 Query: 297 QAEGLTARGIPNSISI 250 G+T GIPNS SI Sbjct: 911 --SGVTGMGIPNSTSI 924
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 54.3 bits (129), Expect = 2e-07 Identities = 31/78 (39%), Positives = 41/78 (52%) Frame = -2 Query: 483 HDTPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDH 304 H PAW D + +AF+ F K+ I +QV N D +NR G PY+LL P + Sbjct: 856 HQEPAWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRP-LNGN 914 Query: 303 TGQAEGLTARGIPNSISI 250 A+ + GIPNSISI Sbjct: 915 PMDAKTVMEMGIPNSISI 932
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 53.1 bits (126), Expect = 4e-07 Identities = 31/76 (40%), Positives = 39/76 (51%) Frame = -2 Query: 477 TPAWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHTG 298 T W SDA A+ F A+L+ IE + N D +LKNR G PY L+ P + Sbjct: 872 TRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD---- 927 Query: 297 QAEGLTARGIPNSISI 250 G+T GIPNS SI Sbjct: 928 --AGVTGMGIPNSTSI 941
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 44.7 bits (104), Expect = 1e-04 Identities = 28/74 (37%), Positives = 39/74 (52%) Frame = -2 Query: 471 AWTSDAKALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHTGQA 292 +W ++ AF+RF KL+ +E + N + LKNR G Y LL P T +H Sbjct: 829 SWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKP-TSEH---- 883 Query: 291 EGLTARGIPNSISI 250 G+T G+P SISI Sbjct: 884 -GVTGMGVPYSISI 896
>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3| Length = 623 Score = 33.1 bits (74), Expect = 0.40 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 4/47 (8%) Frame = -1 Query: 376 PAAQEPHRAGQVPIHAALPKHPRPHGTGRG----AHRQGHPEQHIHL 248 P+ PHR +P H P+HP PH H Q HP H H+ Sbjct: 380 PSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQ-HPPPHQHI 425
>SYP_MYCTU (O05814) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 582 Score = 31.2 bits (69), Expect = 1.5 Identities = 20/40 (50%), Positives = 23/40 (57%) Frame = +1 Query: 229 TTDVLRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 348 T DVL DG VR G +G+SR+V V EQH ELG Sbjct: 438 TADVLGEDGKPVRLTMGSYGIGVSRLV-AVVAEQHHDELG 476
>PTNAB_SHIFL (P69800) PTS system mannose-specific EIIAB component (EIIAB-Man)| [Includes: Mannose-specific phosphotransferase enzyme IIA component (EC 2.7.1.-) (PTS system mannose-specific EIIA component) (EIII-Man); Mannose-specific phosphotransferase enz Length = 322 Score = 30.8 bits (68), Expect = 2.0 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -2 Query: 459 DAKALEAFKRFGAKLEGIEKQVAAMNSDPQLK 364 D K +EAFK+ A+ GIE +V +++DP+LK Sbjct: 283 DEKDIEAFKKLNAR--GIELEVRKVSTDPKLK 312
>PTNAB_ECOLI (P69797) PTS system mannose-specific EIIAB component (EIIAB-Man)| [Includes: Mannose-specific phosphotransferase enzyme IIA component (EC 2.7.1.-) (PTS system mannose-specific EIIA component) (EIII-Man); Mannose-specific phosphotransferase enz Length = 322 Score = 30.8 bits (68), Expect = 2.0 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -2 Query: 459 DAKALEAFKRFGAKLEGIEKQVAAMNSDPQLK 364 D K +EAFK+ A+ GIE +V +++DP+LK Sbjct: 283 DEKDIEAFKKLNAR--GIELEVRKVSTDPKLK 312
>PTNAB_ECOL6 (P69798) PTS system mannose-specific EIIAB component (EIIAB-Man)| [Includes: Mannose-specific phosphotransferase enzyme IIA component (EC 2.7.1.-) (PTS system mannose-specific EIIA component) (EIII-Man); Mannose-specific phosphotransferase enz Length = 322 Score = 30.8 bits (68), Expect = 2.0 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -2 Query: 459 DAKALEAFKRFGAKLEGIEKQVAAMNSDPQLK 364 D K +EAFK+ A+ GIE +V +++DP+LK Sbjct: 283 DEKDIEAFKKLNAR--GIELEVRKVSTDPKLK 312
>PTNAB_ECO57 (P69799) PTS system mannose-specific EIIAB component (EIIAB-Man)| [Includes: Mannose-specific phosphotransferase enzyme IIA component (EC 2.7.1.-) (PTS system mannose-specific EIIA component) (EIII-Man); Mannose-specific phosphotransferase enz Length = 322 Score = 30.8 bits (68), Expect = 2.0 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -2 Query: 459 DAKALEAFKRFGAKLEGIEKQVAAMNSDPQLK 364 D K +EAFK+ A+ GIE +V +++DP+LK Sbjct: 283 DEKDIEAFKKLNAR--GIELEVRKVSTDPKLK 312
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 30.0 bits (66), Expect = 3.3 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Frame = -1 Query: 361 PHRAGQVPIHAALP---KHPRPHGTGRGAHRQGHP----EQHIHLI*ARPSSRPH 218 PH+ +P H P +HP H + H+Q HP H+H A + PH Sbjct: 278 PHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPH 332
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 30.0 bits (66), Expect = 3.3 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Frame = -1 Query: 361 PHRAGQVPIHAALP---KHPRPHGTGRGAHRQGHP----EQHIHLI*ARPSSRPH 218 PH+ +P H P +HP H + H+Q HP H+H A + PH Sbjct: 123 PHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPH 177
>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3| Length = 622 Score = 29.6 bits (65), Expect = 4.4 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 5/46 (10%) Frame = -1 Query: 376 PAAQEPHRAGQVPIHAALPKHPRPHGTGRGAHRQGHPE-----QHI 254 P+ PHR +P H HP PH + HP+ QHI Sbjct: 379 PSPHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQHPSPHQHI 424
>SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)| Length = 381 Score = 29.6 bits (65), Expect = 4.4 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 5/25 (20%) Frame = -1 Query: 322 PKHPRP-----HGTGRGAHRQGHPE 263 P HP P H +G HRQGHPE Sbjct: 235 PTHPAPPGLHHHHKHKGQHRQGHPE 259
>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)| Length = 381 Score = 29.6 bits (65), Expect = 4.4 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 5/25 (20%) Frame = -1 Query: 322 PKHPRP-----HGTGRGAHRQGHPE 263 P HP P H +G HRQGHPE Sbjct: 235 PTHPAPPGLHHHHKHKGQHRQGHPE 259
>AFF3_HUMAN (P51826) AF4/FMR2 family member 3 (LAF-4 protein) (Lymphoid nuclear| protein related to AF4) Length = 1227 Score = 29.3 bits (64), Expect = 5.7 Identities = 22/86 (25%), Positives = 34/86 (39%) Frame = -2 Query: 453 KALEAFKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNTPDHTGQAEGLTAR 274 KA ++FG L E ++ + ++ +K PY L+Y T + A L Sbjct: 990 KADAMVEKFGKALNYAEAALSFIECGNAMEQGPMESKSPYYLMYSETVELIRYAMRLKTH 1049 Query: 273 GIPNSISI*SEHVRRRDLMLLCYPCL 196 PN+ + L LCY CL Sbjct: 1050 SGPNATP------EDKQLAALCYRCL 1069
>SYNE1_HUMAN (Q8NF91) Nesprin-1 (Nuclear envelope spectrin repeat protein 1)| (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin) Length = 8797 Score = 28.9 bits (63), Expect = 7.5 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%) Frame = -2 Query: 480 DTPAWTSDAKALEA----FKRFGAKLEGIEKQVAAMNSDPQLKNRTGPAKFPYMLLYPNT 313 D P TS+ + L+A + K++G ++Q+A++NS + K T AK MLL Sbjct: 5763 DKPVATSNIQELQAQISRHEELAQKIKGYQEQIASLNS--KCKMLTMKAKHATMLL--TV 5818 Query: 312 PDHTGQAEG 286 + G AEG Sbjct: 5819 TEVEGLAEG 5827
>ALR1_AGRT5 (P58736) Alanine racemase, biosynthetic (EC 5.1.1.1)| Length = 391 Score = 28.9 bits (63), Expect = 7.5 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -2 Query: 480 DTPAWTSDAKALEAFKRFGAKLEGIEKQVAA 388 DTP+ + LE+F+R A EGIE ++A Sbjct: 183 DTPSSPMNRAQLESFRRVSAAFEGIESSLSA 213
>SPIKE_CVBM (P15777) Spike glycoprotein precursor (Peplomer protein) (E2)| [Contains: Spike protein S1 (90B); Spike protein S2 (90A)] Length = 1363 Score = 28.5 bits (62), Expect = 9.7 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Frame = +2 Query: 212 KSMRSRRRTCSDQMDMLFGMPLA---VSPSACPVWSGVFG*SSMYGNLAGPVRFLSCGSE 382 +S R T + + + +P A VS W+ FG + + PV + Sbjct: 414 QSFNYRIDTTATSCQLYYNLPAANVSVSRFNPSTWNRRFGFTEQFVFKPQPVGVFTHHDV 473 Query: 383 FMAATCFSMPSSFAPNRLNAS 445 A CF PS+F P +L+ S Sbjct: 474 VYAQHCFKAPSNFCPCKLDGS 494
>Y5204_STRCO (Q9FCI4) UPF0182 protein SCO5204| Length = 1000 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +2 Query: 347 AGPVRFLSCGSEFMAATCFSMPSSFAPN-RLNASSALASDVHAGVS 481 A P +LS A FS+ ++F PN R N S+ +A D AG S Sbjct: 731 AVPPYYLSMKMPDQKAQAFSLTTTFTPNGRDNLSAFMAVDAEAGTS 776
>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed| Length = 596 Score = 28.5 bits (62), Expect = 9.7 Identities = 15/40 (37%), Positives = 17/40 (42%) Frame = -1 Query: 379 GPAAQEPHRAGQVPIHAALPKHPRPHGTGRGAHRQGHPEQ 260 GP +P Q P H LP HP H Q HP+Q Sbjct: 85 GPMPAQPPHHHQHPHHHQLPHHP---------HHQHHPQQ 115 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,685,376 Number of Sequences: 219361 Number of extensions: 1355203 Number of successful extensions: 4102 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 3910 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4070 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
