ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl01h12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precur... 32 0.30
2LUZP1_HUMAN (Q86V48) Leucine zipper protein 1 30 1.1
3GZF3_YEAST (P42944) Protein GZF3 28 4.4
4SAS6_XENLA (Q6NRG6) Spindle assembly abnormal protein 6 homolog 28 5.7
5YKG6_CAEEL (P46556) Hypothetical protein B0285.6 in chromosome III 28 5.7
6NAD2_CAEEL (P32739) Sodium-dependent high-affinity dicarboxylate... 28 7.4
7COX1_MYTED (P41774) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) ... 27 9.7
8PYS2_PSEAE (Q06584) Pyocin-S2 (EC 3.1.-.-) (Killer protein) 27 9.7
9PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5) 27 9.7
10PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5) 27 9.7
11PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.... 27 9.7
12GSHB_ARATH (P46416) Glutathione synthetase, chloroplast precurso... 27 9.7
13EVX2_MOUSE (P49749) Homeobox even-skipped homolog protein 2 (EVX-2) 27 9.7
14GLR_MOUSE (Q61606) Glucagon receptor precursor (GL-R) 27 9.7

>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC|
           3.2.1.-) (Soluble cell wall protein 11)
          Length = 542

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = +2

Query: 140 TKTSHLTEEEKKKKPCSFPGSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIYSSKLAV 319
           + TS  T   ++    +  GSS S AA+   PK++A  + P N+  SC  A   SS L +
Sbjct: 250 SSTSSSTSSTQETAATTSEGSSSSSAAITSSPKAIA--YSPYNDDGSCKSADAVSSDLTL 307



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>LUZP1_HUMAN (Q86V48) Leucine zipper protein 1|
          Length = 1076

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
 Frame = +2

Query: 143 KTSHL-------TEEEKKKKPCSFPGSSKS*AAVAERPKSMASSFPPNNNQHS 280
           K SH+       T+E KK +    PGSS+S    +    S+ S +PP   +HS
Sbjct: 433 KASHMGVSTDSGTQETKKTEDRFVPGSSQSEGKKSREQPSVLSRYPPAAQEHS 485



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>GZF3_YEAST (P42944) Protein GZF3|
          Length = 551

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +2

Query: 98  IV*ELKRNNNI-GGDTKTSHLTEEEKKKKPCSFPGSSKS*AAVAERPKS 241
           ++ ELK + NI     K + +T E+KKKK       + S A ++++PK+
Sbjct: 198 LIAELKGDCNIESSGRKANRVTSEDKKKKSSQLLMGTSSTAKISKKPKT 246



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>SAS6_XENLA (Q6NRG6) Spindle assembly abnormal protein 6 homolog|
          Length = 668

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 78 FWSILSVTISCQHCRSRKLNLRL 10
          F  +LS+ I C+ C  R+ N+RL
Sbjct: 6  FCKVLSIGIKCRECEDRRANVRL 28



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>YKG6_CAEEL (P46556) Hypothetical protein B0285.6 in chromosome III|
          Length = 577

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 198 PGNEQGFFFFSSSVKWDVFVSPPMLLFLFSSYTI 97
           P  + G  + S    W  F  PPM+ ++FSS+ I
Sbjct: 246 PNEDHGISYLS----WMAFAIPPMIFYMFSSWFI 275



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>NAD2_CAEEL (P32739) Sodium-dependent high-affinity dicarboxylate transporter 2|
           (Na(+)/dicarboxylate cotransporter 2) (NaDC-2) (ceNaDC2)
          Length = 551

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 159 VKWDVFVSPPMLLFLFSSYTI 97
           ++W VF  PPM ++L +SY I
Sbjct: 241 LQWMVFAIPPMFVYLLASYII 261



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>COX1_MYTED (P41774) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide I)
          Length = 551

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
 Frame = -1

Query: 224 RRRPNSCWSLGMNKAFFF-----FLLLSNGMFLCLLQCYYFFSVLTQFVTMYCGFGVFCR 60
           + +P + WS G    F        LL S  M + L   YY  +     ++M   FGVFC 
Sbjct: 351 KMKPAAYWSTGFLFLFTVGGLTGVLLSSASMDVSLHDTYYVVAHFHYVLSMGAVFGVFCG 410

Query: 59  LQYRV-SIVGV 30
           L + + + VGV
Sbjct: 411 LNHWLPNFVGV 421



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>PYS2_PSEAE (Q06584) Pyocin-S2 (EC 3.1.-.-) (Killer protein)|
          Length = 688

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 21/100 (21%)
 Frame = +2

Query: 92  LQIV*ELKRNNNIGGDTKTSHLTEEEKKKKPCSFPGSSKS*AAVAERPKSM--ASSFPPN 265
           L+ V ELK    + G   +++   +EK          +KS  A+ +RP ++  AS FP  
Sbjct: 76  LKEVDELKSEAGLPGKAVSANDIRDEKSIVDALMDAKAKSLKAIEDRPANLYTASDFPQK 135

Query: 266 N-------------------NQHSCNLAKIYSSKLAVAHI 328
           +                   ++H   LAK YS+ +  A I
Sbjct: 136 SESMYQSQLLASRKFYGEFLDRHMSELAKAYSADIYKAQI 175



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>PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5)|
          Length = 505

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = -1

Query: 320 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFF 171
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYY 456



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>PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5)|
          Length = 505

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = -1

Query: 320 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFF 171
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYY 456



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>PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5) (PCL1)|
          Length = 505

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = -1

Query: 320 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFF 171
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYY 456



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>GSHB_ARATH (P46416) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3)|
           (Glutathione synthase) (GSH synthetase) (GSH-S)
          Length = 539

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
 Frame = +2

Query: 50  DIVTDRILQNHSTLLQIV*ELKRNNNIGG-------DTKTSHLTEEEKKKKPCSFPGSSK 208
           D+ T R+L  HS +L+     K +  +G        D +T+ L + E     CSFPG S+
Sbjct: 165 DVFTSRLLDIHSKMLER--NKKEDIRLGLHRFDYMLDEETNSLLQIEMNTISCSFPGLSR 222



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>EVX2_MOUSE (P49749) Homeobox even-skipped homolog protein 2 (EVX-2)|
          Length = 475

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -3

Query: 258 GKEEAMDFGLSATAA*LLLEPGNEQGFFFFSSSVKWDVFVSPP 130
           G     DFG SA A      P +E GF  +S++V     VSPP
Sbjct: 429 GTAGGSDFGCSAAA------PRSESGFLPYSAAVLSKTAVSPP 465



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>GLR_MOUSE (Q61606) Glucagon receptor precursor (GL-R)|
          Length = 485

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = -1

Query: 245 PWILVSRRRRPNSCWSLGMNKAFFFFLLLSNGMFLCLLQCYYFFSVLTQFV 93
           PW++V        CW+   N  F++ L +   +FL LL  ++ F  + Q +
Sbjct: 282 PWVVVKCLFENVQCWTSNDNMGFWWILRIP--VFLALLINFFIFVHIIQLL 330


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,757,448
Number of Sequences: 219361
Number of extensions: 975459
Number of successful extensions: 2935
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2935
length of database: 80,573,946
effective HSP length: 86
effective length of database: 61,708,900
effective search space used: 1481013600
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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