Clone Name | rbastl01h12 |
---|---|
Clone Library Name | barley_pub |
>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC| 3.2.1.-) (Soluble cell wall protein 11) Length = 542 Score = 32.3 bits (72), Expect = 0.30 Identities = 20/60 (33%), Positives = 30/60 (50%) Frame = +2 Query: 140 TKTSHLTEEEKKKKPCSFPGSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIYSSKLAV 319 + TS T ++ + GSS S AA+ PK++A + P N+ SC A SS L + Sbjct: 250 SSTSSSTSSTQETAATTSEGSSSSSAAITSSPKAIA--YSPYNDDGSCKSADAVSSDLTL 307
>LUZP1_HUMAN (Q86V48) Leucine zipper protein 1| Length = 1076 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%) Frame = +2 Query: 143 KTSHL-------TEEEKKKKPCSFPGSSKS*AAVAERPKSMASSFPPNNNQHS 280 K SH+ T+E KK + PGSS+S + S+ S +PP +HS Sbjct: 433 KASHMGVSTDSGTQETKKTEDRFVPGSSQSEGKKSREQPSVLSRYPPAAQEHS 485
>GZF3_YEAST (P42944) Protein GZF3| Length = 551 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = +2 Query: 98 IV*ELKRNNNI-GGDTKTSHLTEEEKKKKPCSFPGSSKS*AAVAERPKS 241 ++ ELK + NI K + +T E+KKKK + S A ++++PK+ Sbjct: 198 LIAELKGDCNIESSGRKANRVTSEDKKKKSSQLLMGTSSTAKISKKPKT 246
>SAS6_XENLA (Q6NRG6) Spindle assembly abnormal protein 6 homolog| Length = 668 Score = 28.1 bits (61), Expect = 5.7 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -3 Query: 78 FWSILSVTISCQHCRSRKLNLRL 10 F +LS+ I C+ C R+ N+RL Sbjct: 6 FCKVLSIGIKCRECEDRRANVRL 28
>YKG6_CAEEL (P46556) Hypothetical protein B0285.6 in chromosome III| Length = 577 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -3 Query: 198 PGNEQGFFFFSSSVKWDVFVSPPMLLFLFSSYTI 97 P + G + S W F PPM+ ++FSS+ I Sbjct: 246 PNEDHGISYLS----WMAFAIPPMIFYMFSSWFI 275
>NAD2_CAEEL (P32739) Sodium-dependent high-affinity dicarboxylate transporter 2| (Na(+)/dicarboxylate cotransporter 2) (NaDC-2) (ceNaDC2) Length = 551 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -3 Query: 159 VKWDVFVSPPMLLFLFSSYTI 97 ++W VF PPM ++L +SY I Sbjct: 241 LQWMVFAIPPMFVYLLASYII 261
>COX1_MYTED (P41774) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 551 Score = 27.3 bits (59), Expect = 9.7 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 6/71 (8%) Frame = -1 Query: 224 RRRPNSCWSLGMNKAFFF-----FLLLSNGMFLCLLQCYYFFSVLTQFVTMYCGFGVFCR 60 + +P + WS G F LL S M + L YY + ++M FGVFC Sbjct: 351 KMKPAAYWSTGFLFLFTVGGLTGVLLSSASMDVSLHDTYYVVAHFHYVLSMGAVFGVFCG 410 Query: 59 LQYRV-SIVGV 30 L + + + VGV Sbjct: 411 LNHWLPNFVGV 421
>PYS2_PSEAE (Q06584) Pyocin-S2 (EC 3.1.-.-) (Killer protein)| Length = 688 Score = 27.3 bits (59), Expect = 9.7 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 21/100 (21%) Frame = +2 Query: 92 LQIV*ELKRNNNIGGDTKTSHLTEEEKKKKPCSFPGSSKS*AAVAERPKSM--ASSFPPN 265 L+ V ELK + G +++ +EK +KS A+ +RP ++ AS FP Sbjct: 76 LKEVDELKSEAGLPGKAVSANDIRDEKSIVDALMDAKAKSLKAIEDRPANLYTASDFPQK 135 Query: 266 N-------------------NQHSCNLAKIYSSKLAVAHI 328 + ++H LAK YS+ + A I Sbjct: 136 SESMYQSQLLASRKFYGEFLDRHMSELAKAYSADIYKAQI 175
>PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5)| Length = 505 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/50 (24%), Positives = 25/50 (50%) Frame = -1 Query: 320 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFF 171 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++ Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYY 456
>PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5)| Length = 505 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/50 (24%), Positives = 25/50 (50%) Frame = -1 Query: 320 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFF 171 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++ Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYY 456
>PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5) (PCL1)| Length = 505 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/50 (24%), Positives = 25/50 (50%) Frame = -1 Query: 320 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFF 171 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++ Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYY 456
>GSHB_ARATH (P46416) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3)| (Glutathione synthase) (GSH synthetase) (GSH-S) Length = 539 Score = 27.3 bits (59), Expect = 9.7 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 7/60 (11%) Frame = +2 Query: 50 DIVTDRILQNHSTLLQIV*ELKRNNNIGG-------DTKTSHLTEEEKKKKPCSFPGSSK 208 D+ T R+L HS +L+ K + +G D +T+ L + E CSFPG S+ Sbjct: 165 DVFTSRLLDIHSKMLER--NKKEDIRLGLHRFDYMLDEETNSLLQIEMNTISCSFPGLSR 222
>EVX2_MOUSE (P49749) Homeobox even-skipped homolog protein 2 (EVX-2)| Length = 475 Score = 27.3 bits (59), Expect = 9.7 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = -3 Query: 258 GKEEAMDFGLSATAA*LLLEPGNEQGFFFFSSSVKWDVFVSPP 130 G DFG SA A P +E GF +S++V VSPP Sbjct: 429 GTAGGSDFGCSAAA------PRSESGFLPYSAAVLSKTAVSPP 465
>GLR_MOUSE (Q61606) Glucagon receptor precursor (GL-R)| Length = 485 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/51 (27%), Positives = 25/51 (49%) Frame = -1 Query: 245 PWILVSRRRRPNSCWSLGMNKAFFFFLLLSNGMFLCLLQCYYFFSVLTQFV 93 PW++V CW+ N F++ L + +FL LL ++ F + Q + Sbjct: 282 PWVVVKCLFENVQCWTSNDNMGFWWILRIP--VFLALLINFFIFVHIIQLL 330 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,757,448 Number of Sequences: 219361 Number of extensions: 975459 Number of successful extensions: 2935 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2893 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2935 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)