>SODM_SCHPO (Q9UQX0) Superoxide dismutase [Mn], mitochondrial precursor (EC|
           1.15.1.1)
          Length = 218

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 16/40 (40%), Positives = 27/40 (67%)
 Frame = -3

Query: 322 SPWGSVASTADWRRRVSAPLV*IPEGVGWDFVVVDEDGVL 203
           S WGS+    D+++ ++A L  I +G GW +++VD+DG L
Sbjct: 125 SKWGSLE---DFQKEMNAALASI-QGSGWAWLIVDKDGSL 160

>DPOL_ADEB2 (O72539) DNA polymerase (EC 2.7.7.7)|
          Length = 1017

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 17/29 (58%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
 Frame = +1

Query: 181 EGAIITYIKLRLHLQQ---QNPIQPPPVF 258
           EGA  TYIK RL  QQ   +NPI P P+F
Sbjct: 9   EGATFTYIKGRLIKQQAAVENPILPFPIF 37

>YKF1_YEAST (P35735) Hypothetical 40.5 kDa protein in NUP120-CSE4 intergenic|
           region
          Length = 353

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 124 FSPFLFICDTCCFFLEYIMSERIYSSIHTM 35
           F  F+F+  TCC   EY +  R Y+S+H +
Sbjct: 167 FVVFMFL-STCCLIAEYFLMGRHYASVHPL 195

>Y441_MYCPN (P75337) Hypothetical protein MPN441 (H08_orf102)|
          Length = 102

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -3

Query: 127 FFSPFLFICDTCCFFLEYIMSERIYSSIHTMTPTIYI 17
           F++PF+++   CCF    I S  + S    + PT ++
Sbjct: 53  FWTPFVWLPSCCCFGFSSIASSPLTSCFQRLLPTFWL 89

>LAMA5_MOUSE (Q61001) Laminin alpha-5 chain precursor|
          Length = 3718

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
 Frame = +1

Query: 163  VCASQHEGAIITYIKLRLHLQQQNPIQPPPVFTRGGQ-----ILFGANQQLTPHCPMATA 327
            +C +  EG ++ +      L++ +P+QPP   T   +     +L G  +++      AT 
Sbjct: 2993 LCLAVQEGTLVLFYDFGSGLKKADPLQPPQALTAASKAIQVFLLAGNRKRVLVRVERATV 3052

Query: 328  F 330
            F
Sbjct: 3053 F 3053

>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor|
          Length = 3695

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
 Frame = +1

Query: 163  VCASQHEGAIITYIKLRLHLQQQNPIQPPPVFTRGGQ-----ILFGANQQLTPHCPMATA 327
            +C +  EG+++        L++  P+QPPP  T   +     +L G+ +++      AT 
Sbjct: 2989 LCLAVQEGSLVLLYDFGAGLKKAVPLQPPPPLTSASKAIQVFLLGGSRKRVLVRVERATV 3048

Query: 328  F 330
            +
Sbjct: 3049 Y 3049


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,827,956
Number of Sequences: 219361
Number of extensions: 758629
Number of successful extensions: 2244
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2242
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)