>SATB2_MOUSE (Q8VI24) DNA-binding protein SATB2 (Special AT-rich|
           sequence-binding protein 2)
          Length = 733

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +3

Query: 15  HSHSWV*MVQFITIPITMVPEDQSYPKKENSTMRLRRPNPP 137
           HS     +VQ    P+ ++   QS P KE+S  R   P PP
Sbjct: 564 HSERMQHVVQLPPEPVQVLHRQQSQPTKESSPPREEAPPPP 604

>SATB2_HUMAN (Q9UPW6) DNA-binding protein SATB2 (Special AT-rich|
           sequence-binding protein 2)
          Length = 733

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +3

Query: 15  HSHSWV*MVQFITIPITMVPEDQSYPKKENSTMRLRRPNPP 137
           HS     +VQ    P+ ++   QS P KE+S  R   P PP
Sbjct: 564 HSERMQHVVQLPPEPVQVLHRQQSQPAKESSPPREEAPPPP 604

>CWF19_SCHPO (Q09909) Cell cycle control protein cwf19|
          Length = 639

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 101 KFNHAVATSESTEIRKRNRKGSKKVPT 181
           +F+ A+   +  E+RKR RK  K+VPT
Sbjct: 207 EFDFALEERDELELRKRTRKVQKEVPT 233

>COX18_YEAST (P53239) Inner membrane protein COX18, mitochondrial precursor|
           (Cytochrome c oxidase assembly protein 18)
          Length = 316

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +2

Query: 137 EIRKRNRKGSKK--VPTWMNALTAGIQISL 220
           E RKR +K  KK  VP W NAL   +QI L
Sbjct: 147 ETRKRQKKLFKKYNVPLWKNALLPMVQIPL 176

>FXR1_MOUSE (Q61584) Fragile X mental retardation syndrome-related protein 1|
          Length = 677

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 60  ITMVPEDQSYPKKENSTMRLRRPNPPKLEKEIEKG 164
           +T+V E+   P+++     +R P PP ++KEI +G
Sbjct: 28  LTVVFENNWQPERQVPFNEVRLPPPPDIKKEISEG 62

>FXR1_HUMAN (P51114) Fragile X mental retardation syndrome-related protein 1|
          Length = 621

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 60  ITMVPEDQSYPKKENSTMRLRRPNPPKLEKEIEKG 164
           +T+V E+   P+++     +R P PP ++KEI +G
Sbjct: 28  LTVVFENNWQPERQVPFNEVRLPPPPDIKKEISEG 62

>FXR1_CRIGR (O70523) Fragile X mental retardation syndrome-related protein 1|
          Length = 621

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 60  ITMVPEDQSYPKKENSTMRLRRPNPPKLEKEIEKG 164
           +T+V E+   P+++     +R P PP ++KEI +G
Sbjct: 28  LTVVFENNWQPERQVPFNEVRLPPPPDIKKEISEG 62

>YBL7_YEAST (P38213) Protein YBR007C|
          Length = 736

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +3

Query: 75  EDQSYPKKENSTMRLRRPNPPKLEK-EIEKGRKRFLH 182
           +D  YP  EN      RPNP   EK  IE  R   L+
Sbjct: 189 KDYKYPNLENGNRSTNRPNPFNFEKYRIENTRLHHLY 225

>PSD2_YEAST (P53037) Phosphatidylserine decarboxylase proenzyme 2 precursor (EC|
           4.1.1.65) [Contains: Phosphatidylserine decarboxylase 2
           beta chain; Phosphatidylserine decarboxylase 2 alpha
           chain]
          Length = 1138

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 308 CSPVCVILIGAFFSAKDGSAMRASTAW 228
           C+PVC +    F+S K      ++T W
Sbjct: 37  CNPVCFVTTNTFYSQKTNKLKNSNTHW 63

>FBX16_MOUSE (Q9QZM9) F-box only protein 16|
          Length = 334

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 101 KFNHAVATSESTEIRKRNRKGSKKVPTWMNA 193
           K + ++A   S+ +RK+N  G K++P W ++
Sbjct: 192 KQSPSLAFRSSSSLRKKNNPGEKELPPWRSS 222

>MADCA_MOUSE (Q61826) Mucosal addressin cell adhesion molecule 1 precursor|
           (MAdCAM-1) (mMAdCAM-1)
          Length = 405

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 60  ITMVPEDQSYPKKENSTMRLRRPNPPKLEKEIEKG 164
           IT +P    YPK    T+    P  PK+ +++E G
Sbjct: 254 ITTLPSAPPYPKLSPRTLSSEGPCRPKIHQDLEAG 288


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,527,325
Number of Sequences: 219361
Number of extensions: 805838
Number of successful extensions: 1884
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1884
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)