ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl01h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464085.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
2ref|XM_506715.1| PREDICTED Oryza sativa (japonica cultivar-group... 52 0.001
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
4dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
5dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
6dbj|AK101322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
7dbj|AK072088.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.067
9dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.067
10dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.067
11gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 44 0.26
12ref|XM_740034.1| Plasmodium chabaudi chabaudi organelle processi... 44 0.26
13gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6... 42 1.0
14emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chr... 42 1.0
15emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4,... 42 1.0
16emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4,... 42 1.0
17gb|AC109335.5| Homo sapiens chromosome 8, clone RP11-453N18, com... 42 1.0
18gb|AC110998.4| Homo sapiens chromosome 8, clone RP11-409C19, com... 42 1.0
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
20emb|AJ337042.1|HSA337042 Homo sapiens genomic sequence surroundi... 42 1.0
21gb|AC145973.3| Gallus gallus BAC clone CH261-2E2 from chromosome... 42 1.0
22dbj|AB209134.1| Homo sapiens mRNA for COP9 signalosome subunit 5... 42 1.0
23ref|XM_639962.1| Dictyostelium discoideum hypothetical protein (... 40 4.1
24ref|XM_639268.1| Dictyostelium discoideum hypothetical protein (... 40 4.1
25ref|XM_631393.1| Dictyostelium discoideum hypothetical protein (... 40 4.1
26ref|XM_630977.1| Dictyostelium discoideum hypothetical protein (... 40 4.1
27gb|AC148460.2| Xenopus tropicalis clone CH216-3L17, complete seq... 40 4.1
28gb|AC159316.3| Mus musculus BAC clone RP23-93F3 from chromosome ... 40 4.1
29gb|AC092710.6| Mus musculus chromosome 13, clone RP23-5A19, comp... 40 4.1
30gb|AF188027.5| Homo sapiens chromosome 8 clone RP11-101A8 map q2... 40 4.1
31emb|AL355297.20| Human DNA sequence from clone RP11-230C9 on chr... 40 4.1
32emb|BX572645.26| Zebrafish DNA sequence from clone CH211-197M2 i... 40 4.1
33gb|AC087627.10| Homo sapiens chromosome 8, clone RP11-641K18, co... 40 4.1
34gb|AC110809.3| Homo sapiens BAC clone RP11-754E11 from 4, comple... 40 4.1
35gb|AC016074.6| Homo sapiens, clone RP11-697B24, complete sequence 40 4.1
36gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence 40 4.1
37gb|AC010895.8| Homo sapiens BAC clone RP11-494H5 from 2, complet... 40 4.1
38gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470... 40 4.1
39gb|CY005366.1| Influenza A virus (A/ruddy turnstone/DE/97/2000(H... 40 4.1
40gb|CY004651.1| Influenza A virus (A/mallard duck/ALB/635/1983(H3... 40 4.1
41gb|CY004627.1| Influenza A virus (A/mallard duck/ALB/663/1979(H3... 40 4.1
42gb|CY004500.1| Influenza A virus (A/pintail duck/ALB/631/1981(H1... 40 4.1
43gb|CY004381.1| Influenza A virus (A/mallard/ALB/52/1997(H12N5)) ... 40 4.1
44gb|CY004374.1| Influenza A virus (A/mallard duck/ALB/60/1976(H12... 40 4.1
45gb|CY004340.1| Influenza A virus (A/pintail/Alberta/49/2003(H12N... 40 4.1
46gb|CY004276.1| Influenza A virus (A/mallard/Alberta/154/2003(H6N... 40 4.1
47gb|CY003873.1| Influenza A virus (A/mallard duck/ALB/884/1984(H2... 40 4.1
48gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis tha... 40 4.1
49dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
50dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
51dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
52dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 4.1
53dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
54gb|AC149878.2| Xenopus tropicalis clone CH216-26P2, complete seq... 40 4.1
55gb|AC104098.5| Mus musculus BAC clone RP24-372H3 from 5, complet... 40 4.1
56gb|AC124750.5| Mus musculus BAC clone RP23-273A20 from 8, comple... 40 4.1
57dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Gloss... 40 4.1
58dbj|AP006080.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 4.1
59gb|AC122127.31| Mus musculus chromosome 1, clone RP24-401K1, com... 40 4.1
60gb|AF252829.4| Homo sapiens chromosome 8 clone RP11-495D4 map 8q... 40 4.1
61gb|AC116547.2| Homo sapiens chromosome 8 clone RP11-314C19 map 8... 40 4.1 
>ref|XM_464085.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1850

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 45/50 (90%), Gaps = 1/50 (2%)
 Strand = Plus / Minus

                                                              
Query: 168  aaaaggttcctacatggatgaacgcactgacagcaggcattcaaatatcc 217
            |||||||||||||||| ||||||  ||||||||||| || ||||||||||
Sbjct: 1747 aaaaggttcctacatgaatgaacatactgacagcagaca-tcaaatatcc 1699
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>ref|XM_506715.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0026E05.37
            mRNA
          Length = 2462

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 45/50 (90%), Gaps = 1/50 (2%)
 Strand = Plus / Minus

                                                              
Query: 168  aaaaggttcctacatggatgaacgcactgacagcaggcattcaaatatcc 217
            |||||||||||||||| ||||||  ||||||||||| || ||||||||||
Sbjct: 2257 aaaaggttcctacatgaatgaacatactgacagcagaca-tcaaatatcc 2209
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 45/50 (90%), Gaps = 1/50 (2%)
 Strand = Plus / Minus

                                                                 
Query: 168     aaaaggttcctacatggatgaacgcactgacagcaggcattcaaatatcc 217
               |||||||||||||||| ||||||  ||||||||||| || ||||||||||
Sbjct: 2100612 aaaaggttcctacatgaatgaacatactgacagcagaca-tcaaatatcc 2100564



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 137      gaaattagaaaaagaaatagaaaa 160
                ||||||||||||||||| ||||||
Sbjct: 29353256 gaaattagaaaaagaaaaagaaaa 29353279



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 137      gaaattagaaaaagaaatagaaaa 160
                ||||||||||||||||| ||||||
Sbjct: 28462114 gaaattagaaaaagaaaaagaaaa 28462137
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>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0026E05
          Length = 159860

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 45/50 (90%), Gaps = 1/50 (2%)
 Strand = Plus / Minus

                                                                
Query: 168    aaaaggttcctacatggatgaacgcactgacagcaggcattcaaatatcc 217
              |||||||||||||||| ||||||  ||||||||||| || ||||||||||
Sbjct: 150820 aaaaggttcctacatgaatgaacatactgacagcagaca-tcaaatatcc 150772
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>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1679_B08
          Length = 142529

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 45/50 (90%), Gaps = 1/50 (2%)
 Strand = Plus / Minus

                                                               
Query: 168   aaaaggttcctacatggatgaacgcactgacagcaggcattcaaatatcc 217
             |||||||||||||||| ||||||  ||||||||||| || ||||||||||
Sbjct: 15305 aaaaggttcctacatgaatgaacatactgacagcagaca-tcaaatatcc 15257
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>dbj|AK101322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034E16, full
            insert sequence
          Length = 2462

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 45/50 (90%), Gaps = 1/50 (2%)
 Strand = Plus / Minus

                                                              
Query: 168  aaaaggttcctacatggatgaacgcactgacagcaggcattcaaatatcc 217
            |||||||||||||||| ||||||  ||||||||||| || ||||||||||
Sbjct: 2257 aaaaggttcctacatgaatgaacatactgacagcagaca-tcaaatatcc 2209
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>dbj|AK072088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O04, full
            insert sequence
          Length = 1849

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 45/50 (90%), Gaps = 1/50 (2%)
 Strand = Plus / Minus

                                                              
Query: 168  aaaaggttcctacatggatgaacgcactgacagcaggcattcaaatatcc 217
            |||||||||||||||| ||||||  ||||||||||| || ||||||||||
Sbjct: 1746 aaaaggttcctacatgaatgaacatactgacagcagaca-tcaaatatcc 1698
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 39/43 (90%), Gaps = 1/43 (2%)
 Strand = Plus / Plus

                                                           
Query: 175      tcctacatggatgaacgcactgacagcaggcattcaaatatcc 217
                ||||||||||||||||  ||||||||||| || ||||||||||
Sbjct: 18178308 tcctacatggatgaacatactgacagcagaca-tcaaatatcc 18178349
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>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
           PAC clone:P0434E03
          Length = 142414

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 39/43 (90%), Gaps = 1/43 (2%)
 Strand = Plus / Plus

                                                      
Query: 175 tcctacatggatgaacgcactgacagcaggcattcaaatatcc 217
           ||||||||||||||||  ||||||||||| || ||||||||||
Sbjct: 620 tcctacatggatgaacatactgacagcagaca-tcaaatatcc 661
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>dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1090H08
          Length = 200720

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 39/43 (90%), Gaps = 1/43 (2%)
 Strand = Plus / Plus

                                                         
Query: 175    tcctacatggatgaacgcactgacagcaggcattcaaatatcc 217
              ||||||||||||||||  ||||||||||| || ||||||||||
Sbjct: 182104 tcctacatggatgaacatactgacagcagaca-tcaaatatcc 182145
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 134     accgaaattagaaaaagaaata 155
               ||||||||||||||||||||||
Sbjct: 4820757 accgaaattagaaaaagaaata 4820736
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>ref|XM_740034.1| Plasmodium chabaudi chabaudi organelle processing peptidase,
           (PC000562.01.0) partial mRNA
          Length = 1395

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 139 aattagaaaaagaaatagaaaa 160
           ||||||||||||||||||||||
Sbjct: 242 aattagaaaaagaaatagaaaa 263
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>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete
             sequence
          Length = 252420

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 138   aaattagaaaaagaaatagaa 158
             |||||||||||||||||||||
Sbjct: 22384 aaattagaaaaagaaatagaa 22364
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>emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chromosome 1 Contains a
              novel gene, complete sequence
          Length = 203279

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 218    ctctaagctgccaggctgttg 238
              |||||||||||||||||||||
Sbjct: 107003 ctctaagctgccaggctgttg 106983
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>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16,
            complete sequence
          Length = 114051

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 92   taaaaaggaaaattcaaccat 112
            |||||||||||||||||||||
Sbjct: 6995 taaaaaggaaaattcaaccat 7015
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>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12,
             complete sequence
          Length = 116952

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 92    taaaaaggaaaattcaaccat 112
             |||||||||||||||||||||
Sbjct: 83289 taaaaaggaaaattcaaccat 83309
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>gb|AC109335.5| Homo sapiens chromosome 8, clone RP11-453N18, complete sequence
          Length = 174591

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 82    aaagctaccctaaaaaggaaaattc 106
             |||||||||| ||||||||||||||
Sbjct: 90433 aaagctaccccaaaaaggaaaattc 90409
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>gb|AC110998.4| Homo sapiens chromosome 8, clone RP11-409C19, complete sequence
          Length = 147364

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 82     aaagctaccctaaaaaggaaaattc 106
              |||||||||| ||||||||||||||
Sbjct: 145135 aaagctaccccaaaaaggaaaattc 145159
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 92       taaaaaggaaaattcaaccat 112
                |||||||||||||||||||||
Sbjct: 20572661 taaaaaggaaaattcaaccat 20572681
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>emb|AJ337042.1|HSA337042 Homo sapiens genomic sequence surrounding NotI site, clone NL1-ZD7R
          Length = 780

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 151 aaatagaaaagggtcgaaaaa 171
           |||||||||||||||||||||
Sbjct: 402 aaatagaaaagggtcgaaaaa 382
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>gb|AC145973.3| Gallus gallus BAC clone CH261-2E2 from chromosome unknown, complete
             sequence
          Length = 190804

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    taaaaaggaaaattcaaccat 112
             |||||||||||||||||||||
Sbjct: 75506 taaaaaggaaaattcaaccat 75486
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>dbj|AB209134.1| Homo sapiens mRNA for COP9 signalosome subunit 5 variant protein
          Length = 5691

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 82   aaagctaccctaaaaaggaaaattc 106
            |||||||||| ||||||||||||||
Sbjct: 4929 aaagctaccccaaaaaggaaaattc 4905
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>ref|XM_639962.1| Dictyostelium discoideum hypothetical protein (DDB0167983), partial
            mRNA
          Length = 3327

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 137  gaaattagaaaaagaaatagaaaa 160
            ||||||||||||||||| ||||||
Sbjct: 1428 gaaattagaaaaagaaaaagaaaa 1451
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>ref|XM_639268.1| Dictyostelium discoideum hypothetical protein (DDB0217414), partial
            mRNA
          Length = 3327

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 137  gaaattagaaaaagaaatagaaaa 160
            ||||||||||||||||| ||||||
Sbjct: 1428 gaaattagaaaaagaaaaagaaaa 1451
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>ref|XM_631393.1| Dictyostelium discoideum hypothetical protein (DDB0188170), partial
            mRNA
          Length = 3561

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 138  aaattagaaaaagaaataga 157
            ||||||||||||||||||||
Sbjct: 1531 aaattagaaaaagaaataga 1550
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>ref|XM_630977.1| Dictyostelium discoideum hypothetical protein (DDB0188531), partial
            mRNA
          Length = 3378

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 137  gaaattagaaaaagaaatagaaaa 160
            ||||||||||||||||| ||||||
Sbjct: 2199 gaaattagaaaaagaaaaagaaaa 2222
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>gb|AC148460.2| Xenopus tropicalis clone CH216-3L17, complete sequence
          Length = 194144

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    aaattagaaaaagaaataga 157
              ||||||||||||||||||||
Sbjct: 128377 aaattagaaaaagaaataga 128396
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>gb|AC159316.3| Mus musculus BAC clone RP23-93F3 from chromosome 8, complete sequence
          Length = 240812

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    agaaaaagaaatagaaaagg 162
              ||||||||||||||||||||
Sbjct: 186847 agaaaaagaaatagaaaagg 186828
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>gb|AC092710.6| Mus musculus chromosome 13, clone RP23-5A19, complete sequence
          Length = 268129

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    tagaaaaagaaatagaaaag 161
              ||||||||||||||||||||
Sbjct: 163936 tagaaaaagaaatagaaaag 163955
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>gb|AF188027.5| Homo sapiens chromosome 8 clone RP11-101A8 map q21.11, complete
             sequence
          Length = 146199

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   gacagcaggcattcaaatat 215
             ||||||||||||||||||||
Sbjct: 21017 gacagcaggcattcaaatat 21036
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>emb|AL355297.20| Human DNA sequence from clone RP11-230C9 on chromosome 6 Contains the
              gene for DAN15 protein, a H3 histone, family 3A (H3F3A)
              (H3F3, H3.3A) pseudogene, the 5' end of the gene for
              BRG1-binding protein ELD/OSA1 (p250R KIAA1235) and four CpG
              islands, complete sequence
          Length = 169218

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    tatgaggatgacacacacag 301
              ||||||||||||||||||||
Sbjct: 142844 tatgaggatgacacacacag 142825
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>emb|BX572645.26| Zebrafish DNA sequence from clone CH211-197M2 in linkage group 11,
             complete sequence
          Length = 112739

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 138   aaattagaaaaagaaatagaaaag 161
             |||||||||||||||||| |||||
Sbjct: 92809 aaattagaaaaagaaataaaaaag 92832
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>gb|AC087627.10| Homo sapiens chromosome 8, clone RP11-641K18, complete sequence
          Length = 170211

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   gacagcaggcattcaaatat 215
             ||||||||||||||||||||
Sbjct: 59851 gacagcaggcattcaaatat 59832
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>gb|AC110809.3| Homo sapiens BAC clone RP11-754E11 from 4, complete sequence
          Length = 98985

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   agaaaaagaaatagaaaagg 162
             ||||||||||||||||||||
Sbjct: 55985 agaaaaagaaatagaaaagg 55966
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>gb|AC016074.6| Homo sapiens, clone RP11-697B24, complete sequence
          Length = 164239

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   taaaaaggaaaattcaacca 111
            ||||||||||||||||||||
Sbjct: 9951 taaaaaggaaaattcaacca 9932
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>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence
          Length = 158050

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 137  gaaattagaaaaagaaatagaaaa 160
            ||||||||||||||||| ||||||
Sbjct: 9375 gaaattagaaaaagaaaaagaaaa 9352
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>gb|AC010895.8| Homo sapiens BAC clone RP11-494H5 from 2, complete sequence
          Length = 200363

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 137   gaaattagaaaaagaaatagaaaa 160
             ||||||||||||||||| ||||||
Sbjct: 39186 gaaattagaaaaagaaaaagaaaa 39163
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>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4,
              complete sequence
          Length = 541399

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 137    gaaattagaaaaagaaatagaaaa 160
              ||||||||||||||||| ||||||
Sbjct: 113759 gaaattagaaaaagaaaaagaaaa 113736
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>gb|CY005366.1| Influenza A virus (A/ruddy turnstone/DE/97/2000(H12N5)) segment 6,
            complete sequence
          Length = 1469

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   tcaccatcccaatcacaatg 68
            ||||||||||||||||||||
Sbjct: 1243 tcaccatcccaatcacaatg 1262
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>gb|CY004651.1| Influenza A virus (A/mallard duck/ALB/635/1983(H3N5)) segment 6,
            complete sequence
          Length = 1469

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   tcaccatcccaatcacaatg 68
            ||||||||||||||||||||
Sbjct: 1243 tcaccatcccaatcacaatg 1262
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>gb|CY004627.1| Influenza A virus (A/mallard duck/ALB/663/1979(H3N5)) segment 6,
            complete sequence
          Length = 1469

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   tcaccatcccaatcacaatg 68
            ||||||||||||||||||||
Sbjct: 1243 tcaccatcccaatcacaatg 1262
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>gb|CY004500.1| Influenza A virus (A/pintail duck/ALB/631/1981(H1N5)) segment 6,
            complete sequence
          Length = 1469

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   tcaccatcccaatcacaatg 68
            ||||||||||||||||||||
Sbjct: 1243 tcaccatcccaatcacaatg 1262
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>gb|CY004381.1| Influenza A virus (A/mallard/ALB/52/1997(H12N5)) segment 6, complete
            sequence
          Length = 1469

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   tcaccatcccaatcacaatg 68
            ||||||||||||||||||||
Sbjct: 1243 tcaccatcccaatcacaatg 1262
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>gb|CY004374.1| Influenza A virus (A/mallard duck/ALB/60/1976(H12N5)) segment 6,
            complete sequence
          Length = 1469

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   tcaccatcccaatcacaatg 68
            ||||||||||||||||||||
Sbjct: 1243 tcaccatcccaatcacaatg 1262
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>gb|CY004340.1| Influenza A virus (A/pintail/Alberta/49/2003(H12N5)) segment 6,
            complete sequence
          Length = 1470

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   tcaccatcccaatcacaatg 68
            ||||||||||||||||||||
Sbjct: 1244 tcaccatcccaatcacaatg 1263
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>gb|CY004276.1| Influenza A virus (A/mallard/Alberta/154/2003(H6N5)) segment 6,
            complete sequence
          Length = 1469

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   tcaccatcccaatcacaatg 68
            ||||||||||||||||||||
Sbjct: 1243 tcaccatcccaatcacaatg 1262
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>gb|CY003873.1| Influenza A virus (A/mallard duck/ALB/884/1984(H2N5)) segment 6,
            complete sequence
          Length = 1469

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   tcaccatcccaatcacaatg 68
            ||||||||||||||||||||
Sbjct: 1243 tcaccatcccaatcacaatg 1262
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>gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 74316

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 138   aaattagaaaaagaaatagaaaag 161
             |||||||||||||||| |||||||
Sbjct: 31946 aaattagaaaaagaaaaagaaaag 31969
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>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1148_D05
          Length = 155146

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 137   gaaattagaaaaagaaatagaaaa 160
             ||||||||||||||||| ||||||
Sbjct: 86235 gaaattagaaaaagaaaaagaaaa 86258
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>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0017H11
          Length = 158374

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 137   gaaattagaaaaagaaatagaaaa 160
             ||||||||||||||||| ||||||
Sbjct: 30955 gaaattagaaaaagaaaaagaaaa 30978
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>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1311_H06
          Length = 139868

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 137  gaaattagaaaaagaaatagaaaa 160
            ||||||||||||||||| ||||||
Sbjct: 4128 gaaattagaaaaagaaaaagaaaa 4151
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>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13
          Length = 83511

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   aaattagaaaaagaaataga 157
             ||||||||||||||||||||
Sbjct: 15551 aaattagaaaaagaaataga 15570
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>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0060O16
          Length = 164373

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 137    gaaattagaaaaagaaatagaaaa 160
              ||||||||||||||||| ||||||
Sbjct: 150601 gaaattagaaaaagaaaaagaaaa 150624
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>gb|AC149878.2| Xenopus tropicalis clone CH216-26P2, complete sequence
          Length = 185685

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    agaaaaagaaatagaaaagg 162
              ||||||||||||||||||||
Sbjct: 185574 agaaaaagaaatagaaaagg 185555
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>gb|AC104098.5| Mus musculus BAC clone RP24-372H3 from 5, complete sequence
          Length = 180886

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   agaaaaagaaatagaaaagg 162
             ||||||||||||||||||||
Sbjct: 45171 agaaaaagaaatagaaaagg 45152
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>gb|AC124750.5| Mus musculus BAC clone RP23-273A20 from 8, complete sequence
          Length = 215042

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   agaaaaagaaatagaaaagg 162
             ||||||||||||||||||||
Sbjct: 42681 agaaaaagaaatagaaaagg 42662
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>dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA,
              complete genome
          Length = 697724

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    ttagaaaaagaaatagaaaa 160
              ||||||||||||||||||||
Sbjct: 590297 ttagaaaaagaaatagaaaa 590316
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>dbj|AP006080.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT48M22, TM0118c,
             complete sequence
          Length = 91116

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    aaaggaaaattcaaccatgc 114
             ||||||||||||||||||||
Sbjct: 11809 aaaggaaaattcaaccatgc 11828
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>gb|AC122127.31| Mus musculus chromosome 1, clone RP24-401K1, complete sequence
          Length = 193324

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 209    caaatatccctctaagctgccagg 232
              ||||||||||||||| ||||||||
Sbjct: 132737 caaatatccctctaacctgccagg 132760
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>gb|AF252829.4| Homo sapiens chromosome 8 clone RP11-495D4 map 8q24.2, complete sequence
          Length = 199668

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     taaaaaggaaaattcaacca 111
              ||||||||||||||||||||
Sbjct: 187070 taaaaaggaaaattcaacca 187051
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>gb|AC116547.2| Homo sapiens chromosome 8 clone RP11-314C19 map 8q24.2, complete
             sequence
          Length = 166683

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    taaaaaggaaaattcaacca 111
             ||||||||||||||||||||
Sbjct: 31371 taaaaaggaaaattcaacca 31352


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,685,201
Number of Sequences: 3902068
Number of extensions: 3685201
Number of successful extensions: 101437
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101083
Number of HSP's gapped (non-prelim): 354
length of query: 312
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 290
effective length of database: 17,147,199,772
effective search space: 4972687933880
effective search space used: 4972687933880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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