ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl01h08 |
|---|---|
| Clone Library Name | barley_pub |
>VPP4_HUMAN (Q9HBG4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 840 Score = 66.2 bits (160), Expect = 3e-11 Identities = 28/30 (93%), Positives = 29/30 (96%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSF 361 AFLHALRLHWVEFQNKFY GDGYKF+PFSF Sbjct: 801 AFLHALRLHWVEFQNKFYVGDGYKFSPFSF 830
>VPP1_CAEEL (P30628) Probable vacuolar proton translocating ATPase 116 kDa| subunit a (Uncoordinated protein 32) Length = 905 Score = 63.9 bits (154), Expect = 2e-10 Identities = 30/43 (69%), Positives = 33/43 (76%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISEDEE*ARPN 322 AFLHALRLHWVEFQ+KFY G GY+FAPFSF I +E A N Sbjct: 862 AFLHALRLHWVEFQSKFYGGLGYEFAPFSFEKILAEEREAEEN 904
>VPP1_PONPY (Q5R422) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) Length = 837 Score = 63.5 bits (153), Expect = 2e-10 Identities = 28/35 (80%), Positives = 29/35 (82%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 346 AFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 798 AFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIRE 832
>VPP1_HUMAN (Q93050) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 837 Score = 63.5 bits (153), Expect = 2e-10 Identities = 28/35 (80%), Positives = 29/35 (82%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 346 AFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 798 AFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIRE 832
>VPP1_BOVIN (Q29466) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 838 Score = 63.5 bits (153), Expect = 2e-10 Identities = 28/35 (80%), Positives = 29/35 (82%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 346 AFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 799 AFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIRE 833
>VPP4_MOUSE (Q920R6) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 833 Score = 63.2 bits (152), Expect = 3e-10 Identities = 28/35 (80%), Positives = 30/35 (85%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 346 AFLHALRLHWVEFQNKFYEG G KF+PFSF + E Sbjct: 794 AFLHALRLHWVEFQNKFYEGAGSKFSPFSFKHVLE 828
>VPP1_MOUSE (Q9Z1G4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 839 Score = 63.2 bits (152), Expect = 3e-10 Identities = 28/35 (80%), Positives = 29/35 (82%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 346 AFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 800 AFLHALRLHWVEFQNKFYTGTGFKFLPFSFEHIRE 834
>VPP1_RAT (P25286) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase su Length = 838 Score = 63.2 bits (152), Expect = 3e-10 Identities = 28/35 (80%), Positives = 29/35 (82%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 346 AFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 799 AFLHALRLHWVEFQNKFYTGTGFKFLPFSFEHIRE 833
>VPP2_MOUSE (P15920) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7) Length = 856 Score = 62.8 bits (151), Expect = 4e-10 Identities = 27/34 (79%), Positives = 30/34 (88%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSFALIS 349 AFLHA+RLHWVEFQNKFY G G KF PFSF+L+S Sbjct: 813 AFLHAIRLHWVEFQNKFYVGAGTKFVPFSFSLLS 846
>VPP2_HUMAN (Q9Y487) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (TJ6) Length = 856 Score = 62.8 bits (151), Expect = 4e-10 Identities = 27/34 (79%), Positives = 30/34 (88%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSFALIS 349 AFLHA+RLHWVEFQNKFY G G KF PFSF+L+S Sbjct: 813 AFLHAIRLHWVEFQNKFYVGAGTKFVPFSFSLLS 846
>VPP3_HUMAN (Q13488) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 3 (V-ATPase 116-kDa isoform a3) (Osteoclastic proton pump 116 kDa subunit) (OC-116 kDa) (OC116) (T-cell immune regulator 1) (T cell immune response cDNA7 protein) (TIRC7) Length = 830 Score = 62.4 bits (150), Expect = 5e-10 Identities = 26/31 (83%), Positives = 28/31 (90%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSFA 358 AFLHALRLHWVEFQNKFY G GYK +PF+FA Sbjct: 796 AFLHALRLHWVEFQNKFYSGTGYKLSPFTFA 826
>VPP2_BOVIN (O97681) Vacuolar proton translocating ATPase 116 kDa subunit A| isoform 2 (V-ATPase 116-kDa isoform a2) Length = 854 Score = 62.0 bits (149), Expect = 7e-10 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSFALIS 349 AFLHA+RLHWVEFQNKFY G G KF PFSF L+S Sbjct: 813 AFLHAIRLHWVEFQNKFYVGAGTKFVPFSFRLLS 846
>STV1_YEAST (P37296) Vacuolar ATP synthase subunit a, Golgi isoform (EC| 3.6.3.14) (V-ATPase 101 kDa subunit) (V-ATPase subunit AC115) (Similar to VPH1 protein 1) Length = 890 Score = 54.3 bits (129), Expect = 1e-07 Identities = 23/35 (65%), Positives = 27/35 (77%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 346 A LHALRLHWVE +KF+EG+GY + PFSF I E Sbjct: 856 AMLHALRLHWVEAMSKFFEGEGYAYEPFSFRAIIE 890
>VPH1_SCHPO (O13742) Probable vacuolar ATP synthase 91 kDa subunit (Vacuolar| ATPase 91 kDa subunit) Length = 805 Score = 50.4 bits (119), Expect = 2e-06 Identities = 20/35 (57%), Positives = 27/35 (77%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 346 A LH+LRLHWVE +K +EG+GY F PF+F + +E Sbjct: 771 AMLHSLRLHWVEGMSKHFEGEGYAFTPFTFKVTAE 805
>VATI_METJA (Q57675) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 695 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/28 (67%), Positives = 25/28 (89%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPF 367 AF+H+LRLH+VEF ++FYEG G KF+PF Sbjct: 659 AFIHSLRLHYVEFFSQFYEGGGKKFSPF 686
>VATI_PYRHO (O57721) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 659 Score = 45.4 bits (106), Expect = 6e-05 Identities = 19/29 (65%), Positives = 23/29 (79%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFS 364 AF+HALRLH+VEF FY G+G KF PF+ Sbjct: 619 AFVHALRLHYVEFFGTFYSGEGRKFEPFA 647
>VATI_PYRAB (Q9UXU2) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 659 Score = 45.4 bits (106), Expect = 6e-05 Identities = 19/29 (65%), Positives = 23/29 (79%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFS 364 AF+HALRLH+VEF FY G+G KF PF+ Sbjct: 619 AFVHALRLHYVEFFGTFYSGEGRKFEPFA 647
>VPH1_YEAST (P32563) Vacuolar ATP synthase subunit a, vacuolar isoform (EC| 3.6.3.14) (V-ATPase a subunit) (Vacuolar proton pump a subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) Length = 839 Score = 44.3 bits (103), Expect = 1e-04 Identities = 17/30 (56%), Positives = 23/30 (76%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSF 361 A LH+LRLHWVE +KF+ G+G + PF+F Sbjct: 792 AMLHSLRLHWVESMSKFFVGEGLPYEPFAF 821
>VATI_PYRKO (Q5JDS2) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 663 Score = 43.9 bits (102), Expect = 2e-04 Identities = 18/28 (64%), Positives = 22/28 (78%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPF 367 AF+HALRLH+VEF FY G+G +F PF Sbjct: 623 AFVHALRLHYVEFFGTFYSGEGKRFEPF 650
>VATI_METMA (O59659) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 649 Score = 43.1 bits (100), Expect = 3e-04 Identities = 19/28 (67%), Positives = 21/28 (75%) Frame = -1 Query: 444 LHALRLHWVEFQNKFYEGDGYKFAPFSF 361 LHALRL +VEF KFYEG G KF PF + Sbjct: 615 LHALRLQYVEFFGKFYEGGGRKFNPFGY 642
>VATI_HALSA (Q9HND8) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 722 Score = 41.6 bits (96), Expect = 0.001 Identities = 19/30 (63%), Positives = 22/30 (73%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSF 361 A L ALRL +VEF NKFYEG G K+ PF + Sbjct: 685 AGLQALRLEYVEFFNKFYEGGGEKYNPFGY 714
>VPH1_NEUCR (Q01290) Vacuolar ATP synthase 98 kDa subunit (Vacuolar ATPase 98| kDa subunit) Length = 856 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/38 (52%), Positives = 24/38 (63%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISEDEE 337 A LH+LRL WVE +KF E G+ F PFSF E+ E Sbjct: 812 AMLHSLRLAWVESFSKFAEFGGWPFTPFSFKQQLEESE 849
>VATI_ARCFU (O29106) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 676 Score = 35.8 bits (81), Expect = 0.050 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = -1 Query: 444 LHALRLHWVEFQNKFYEGDGYKFAPF 367 L +LRLH+VEF KF+EG G + PF Sbjct: 642 LQSLRLHYVEFFTKFFEGGGRLYEPF 667
>VATI_SULSO (Q9UWW3) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 701 Score = 34.7 bits (78), Expect = 0.11 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = -1 Query: 447 FLHALRLHWVEFQNKFYEGDGYKFAP 370 F+ LRLH+ E +KFYEG G KF P Sbjct: 668 FIQDLRLHFYEMFSKFYEGRGRKFEP 693
>VATI_AERPE (Q9YEA0) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 686 Score = 34.3 bits (77), Expect = 0.15 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAP 370 AF HA RLH+ E+ +KFY G G + P Sbjct: 645 AFAHASRLHFYEWFSKFYSGTGVPYTP 671
>NTPI_ENTHR (P43439) V-type sodium ATP synthase subunit I (EC 3.6.3.15)| (Na(+)-translocating ATPase subunit I) Length = 664 Score = 33.9 bits (76), Expect = 0.19 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAP 370 A++H RL +VEF KFY G G F P Sbjct: 623 AYVHGARLQYVEFFGKFYTGGGRSFKP 649
>VATI_METTH (O27041) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 658 Score = 33.1 bits (74), Expect = 0.33 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = -1 Query: 450 AFLHALRLHWVEFQNKFYEGDGYKFAPF 367 AF+++LRLH+VEF +FY G KF F Sbjct: 620 AFINSLRLHYVEFFAQFYMGGKNKFNAF 647
>VATI_THEAC (Q9HM61) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 637 Score = 30.8 bits (68), Expect = 1.6 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -1 Query: 444 LHALRLHWVEFQNKFYEGDGYKFAPF 367 + RL +VEF +KFY G+G F PF Sbjct: 595 IQGARLIYVEFFSKFYHGNGRMFRPF 620
>VATI_CHLPN (Q9Z990) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 660 Score = 28.9 bits (63), Expect = 6.2 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = -1 Query: 444 LHALRLHWVEFQNKFYEGDGYKFAPFSFALISEDEE 337 +H LRL+++E+ + ++G G P + SED E Sbjct: 613 IHGLRLNFIEWYHYSFDGGGRPLRPLRKIVCSEDAE 648
>RHG25_HUMAN (P42331) Rho-GTPase-activating protein 25| Length = 638 Score = 28.5 bits (62), Expect = 8.1 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -1 Query: 348 EDEE*ARPNSCIYCSLCNILRVALLPEQS 262 +DEE +P C+Y C I +A PE++ Sbjct: 72 KDEEDTKPQGCMYLPGCTIKEIATNPEEA 100 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,378,286 Number of Sequences: 219361 Number of extensions: 1346539 Number of successful extensions: 3389 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 3339 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3388 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
