>RF1_ORYSA (Q76C99) Rf1 protein, mitochondrial precursor (PPR protein)|
           (Fertility restorer) (Restorer for CMS)
          Length = 791

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 427 TFDIMVHGFCKHGSRSEAERWMEAMYRNGFYPTWYTMRL 311
           TF+IM+    K G   EA+    A   NG  P ++T RL
Sbjct: 653 TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691

>ECM1_HUMAN (Q16610) Extracellular matrix protein 1 precursor (Secretory|
           component p85)
          Length = 540

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 322 CTKWDRTRFGTLPPSTFQPHFCCHACRSHVP 414
           CT+    RF        QPH+   AC SH P
Sbjct: 259 CTRQGEARFSCFQEEAPQPHYQLRACPSHQP 289

>POL4_DROME (P10394) Retrovirus-related Pol polyprotein from transposon 412|
            [Includes: Protease (EC 3.4.23.-); Reverse transcriptase
            (EC 2.7.7.49); Endonuclease]
          Length = 1237

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
 Frame = -1

Query: 79   DIW*SYFCYCFLITQGM----NPLRFIFG 5
            D+W  YF YCF  TQ M     P   +FG
Sbjct: 1089 DVWLQYFVYCFNTTQSMVHNYCPYELVFG 1117

>SYGA_HELPY (P56453) Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)|
           (Glycine--tRNA ligase alpha chain) (GlyRS)
          Length = 303

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 8/15 (53%), Positives = 14/15 (93%)
 Frame = +2

Query: 290 SQGCIVVQPHSVPSG 334
           +QGC+V+QP+ +P+G
Sbjct: 17  NQGCLVIQPYDIPAG 31


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,758,772
Number of Sequences: 219361
Number of extensions: 1188954
Number of successful extensions: 2516
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2514
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)