ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl01h05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108946.1| Zea mays PCO097158 mRNA sequence 54 3e-04
2gb|AC126936.4| Mus musculus BAC clone RP24-196L14 from chromosom... 46 0.079
3gb|AC089996.12| Homo sapiens 12 BAC RP11-76M15 (Roswell Park Can... 46 0.079
4gb|AC161114.4| Mus musculus BAC clone RP24-338A5 from chromosome... 44 0.31
5dbj|AK164273.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 44 0.31
6gb|AC004038.1| Homo sapiens chromosome 5, BAC clone 8k5, BAC 500... 42 1.2
7gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, co... 42 1.2
8gb|AC124433.4| Mus musculus BAC clone RP24-248P14 from chromosom... 42 1.2
9emb|CR786570.9| Zebrafish DNA sequence from clone CH211-280H4 in... 42 1.2
10gb|AC163637.4| Mus musculus BAC clone RP23-186O3 from chromosome... 42 1.2
11gb|AY129241.1| Oryzias latipes strain HNI male sex-determining p... 42 1.2
12dbj|AB251575.1| Oryzias latipes gene for mesp, complete cds 42 1.2
13dbj|AB232918.1| Oryzias latipes hox gene cluster, complete cds 42 1.2
14gb|AC008588.8| Homo sapiens chromosome 5 clone CTC-573M9, comple... 42 1.2
15gb|AC008072.3| Homo sapiens BAC clone RP11-408N22 from 2, comple... 42 1.2
16gb|AE014844.1| Plasmodium falciparum 3D7 chromosome 12, section ... 42 1.2
17gb|DQ208194.1| Mayetiola destructor Mde8i18_1 gene, partial cds;... 42 1.2
18emb|BX005270.7| Zebrafish DNA sequence from clone CH211-158L18 i... 42 1.2
19emb|BX005212.7| Zebrafish DNA sequence from clone DKEY-221H2 in ... 42 1.2
20emb|AL954326.7| Zebrafish DNA sequence from clone DKEY-28N4, com... 42 1.2
21dbj|AP004495.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 1.2
22emb|AL591913.14| Mouse DNA sequence from clone RP23-120A4 on chr... 42 1.2
23dbj|AP005019.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 1.2
24emb|Z50755.1|CER12H7 Caenorhabditis elegans Cosmid R12H7, comple... 40 4.9
25gb|AC091170.15| Homo sapiens chromosome 18, clone RP11-879D5, co... 40 4.9
26gb|AC018816.6| Homo sapiens chromosome 3 clone RP11-250A15 map 3... 40 4.9
27gb|AC127382.4| Homo sapiens BAC clone RP11-1380M11 from UL, comp... 40 4.9
28gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, co... 40 4.9
29gb|AC124958.13| Medicago truncatula clone mth2-18i11, complete s... 40 4.9
30emb|BX546451.2| Human DNA sequence from clone WI2-8737H7 on chro... 40 4.9
31emb|AL683807.22| Human DNA sequence from clone RP13-297E16 on ch... 40 4.9
32emb|AL591846.15| Human DNA sequence from clone RP11-343H5 on chr... 40 4.9
33emb|AL590100.6| Human DNA sequence from clone RP11-49O3 on chrom... 40 4.9
34emb|AL357150.7| Human DNA sequence from clone RP11-122C9 on chro... 40 4.9
35emb|AL356357.22| Human DNA sequence from clone RP4-550F15 on chr... 40 4.9
36emb|AL354661.14| Human DNA sequence from clone RP11-386D8 on chr... 40 4.9
37emb|AL135842.15| Human DNA sequence from clone RP1-91G5 on chrom... 40 4.9
38emb|AL132868.24|HSA262P20 Human DNA sequence from clone RP11-262... 40 4.9
39gb|BC016780.1| Homo sapiens, clone IMAGE:4106389, mRNA 40 4.9
40emb|AJ507836.1|ANI507836 Arthrobacter nicotinovorans pAO1 plasmi... 40 4.9
41gb|AC092904.7| Homo sapiens 3 BAC RP11-675I21 (Roswell Park Canc... 40 4.9
42gb|AC008622.6| Homo sapiens chromosome 19 clone CTB-147N14, comp... 40 4.9
43gb|AC144474.22| Medicago truncatula clone mth2-15l5, complete se... 40 4.9
44gb|AC104077.2| Homo sapiens BAC clone RP11-413P19 from 4, comple... 40 4.9
45gb|AC022367.34| Homo sapiens 12 BAC RP11-685B13 (Roswell Park Ca... 40 4.9
46gb|AC005317.2| Homo sapiens chromosome 15q26.1 clone PAC pDJ457j... 40 4.9
47gb|AC093538.2| Homo sapiens chromosome 5 clone RP11-99I23, compl... 40 4.9
48gb|AC018501.9| Homo sapiens chromosome 3 clone RP11-283K15 map 3... 40 4.9
49gb|AC010269.6| Homo sapiens chromosome 5 clone CTC-485I21, compl... 40 4.9
50gb|AC120057.9| Homo sapiens chromosome 17, clone CTD-2545G14, co... 40 4.9
51gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 4.9
52gb|AC019106.3| Homo sapiens BAC clone RP11-479L11 from 2, comple... 40 4.9
53gb|AC015541.21|AC015541 Homo sapiens 3 BAC RP11-106B10 (Roswell ... 40 4.9
54gb|AC027176.22| Homo sapiens chromosome 15, clone RP11-493E3, co... 40 4.9
55gb|AC021054.28| Homo sapiens 12 BAC RP11-218M22 (Roswell Park Ca... 40 4.9
56gb|AC026162.5|AC026162 Homo sapiens chromosome 3 clone RP11-106B... 40 4.9
57gb|AC087284.22| Homo sapiens chromosome 15, clone RP11-617F23, c... 40 4.9
58gb|AC091978.3| Homo sapiens chromosome 5 clone RP11-531A21, comp... 40 4.9
59gb|AC010349.7|AC010349 Homo sapiens chromosome 5 clone CTD-2020O... 40 4.9
60emb|BX004792.8| Zebrafish DNA sequence from clone DKEY-1J19, com... 40 4.9
61emb|BX284674.8| Zebrafish DNA sequence from clone DKEYP-52E12 in... 40 4.9
62emb|Z69664.1|CEK04D7 Caenorhabditis elegans Cosmid K04D7, comple... 40 4.9
63emb|Z72562.1|SCYGL040C S.cerevisiae chromosome VII reading frame... 40 4.9
64emb|Z72561.1|SCYGL039W S.cerevisiae chromosome VII reading frame... 40 4.9
65emb|CT573055.2| Medicago truncatula chromosome 5 clone mth2-75o1... 40 4.9
66gb|AC005599.5|AC005599 Homo sapiens chromosome 4 clone C0026P05 ... 40 4.9
67gb|AC006226.4|AC006226 Homo sapiens chromosome 4 clone C0011C13 ... 40 4.9
68emb|AL133372.4|CNS01DUX Human chromosome 14 DNA sequence BAC R-2... 40 4.9
69gb|AC005316.1|AC005316 Human Chromosome 15q26.1 PAC clone pDJ10k... 40 4.9
70emb|AL845299.13| Mouse DNA sequence from clone RP23-375N8 on chr... 40 4.9
71gb|AC147644.3| Gallus gallus BAC clone CH261-77K20 from chromoso... 40 4.9
72emb|Z69374.1|HSL174G8B Human DNA sequence from clone LA04NC01-17... 40 4.9
73emb|AL022574.7|HS1111N9 Human DNA sequence from clone RP5-1111N9... 40 4.9
74emb|AL596384.17| Mouse DNA sequence from clone RP23-353J21 on ch... 40 4.9
75gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome 40 4.9
76emb|AL121840.4|CNS01DSR Human chromosome 14 DNA sequence BAC C-2... 40 4.9
77gb|AC100778.5| Homo sapiens chromosome 18, clone RP11-110H1, com... 40 4.9
78gb|AC133637.2| Homo sapiens chromosome 15, clone CTD-2335A18, co... 40 4.9 
>gb|AY108946.1| Zea mays PCO097158 mRNA sequence
          Length = 510

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 20  tattatggtaagcgtctcggaaatggtacagtggcaaag 58
           ||||||||||||||||||  ||||||||||| |||||||
Sbjct: 478 tattatggtaagcgtctccaaaatggtacagcggcaaag 440



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 198 catatgtcaaaagcctatgcacaaacaca 226
           ||||||||||||  |||||||||||||||
Sbjct: 298 catatgtcaaaacactatgcacaaacaca 270
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>gb|AC126936.4| Mus musculus BAC clone RP24-196L14 from chromosome 16, complete
             sequence
          Length = 177785

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 173   aaagaaaagaaagaacaaaccat 195
             |||||||||||||||||||||||
Sbjct: 81992 aaagaaaagaaagaacaaaccat 81970
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>gb|AC089996.12| Homo sapiens 12 BAC RP11-76M15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 107793

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 4     tattaatacactatattattatg 26
             |||||||||||||||||||||||
Sbjct: 70259 tattaatacactatattattatg 70237
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>gb|AC161114.4| Mus musculus BAC clone RP24-338A5 from chromosome 12, complete sequence
          Length = 220746

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 173   aaagaaaagaaagaacaaacca 194
             ||||||||||||||||||||||
Sbjct: 90680 aaagaaaagaaagaacaaacca 90659
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>dbj|AK164273.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030060J01 product:hypothetical
            protein, full insert sequence
          Length = 3998

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 173  aaagaaaagaaagaacaaacca 194
            ||||||||||||||||||||||
Sbjct: 2233 aaagaaaagaaagaacaaacca 2212
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>gb|AC004038.1| Homo sapiens chromosome 5, BAC clone 8k5, BAC 5002 (LBNL H102),
             complete sequence
          Length = 101615

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 174   aagaaaagaaagaacaaacca 194
             |||||||||||||||||||||
Sbjct: 64571 aagaaaagaaagaacaaacca 64551
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>gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, complete sequence
          Length = 187758

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 172   gaaagaaaagaaagaacaaac 192
             |||||||||||||||||||||
Sbjct: 71156 gaaagaaaagaaagaacaaac 71176
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>gb|AC124433.4| Mus musculus BAC clone RP24-248P14 from chromosome 13, complete sequence
          Length = 169876

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 172    gaaagaaaagaaagaacaaac 192
              |||||||||||||||||||||
Sbjct: 140280 gaaagaaaagaaagaacaaac 140300
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>emb|CR786570.9| Zebrafish DNA sequence from clone CH211-280H4 in linkage group 1,
            complete sequence
          Length = 74239

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 172  gaaagaaaagaaagaacaaac 192
            |||||||||||||||||||||
Sbjct: 9956 gaaagaaaagaaagaacaaac 9936
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>gb|AC163637.4| Mus musculus BAC clone RP23-186O3 from chromosome 9, complete sequence
          Length = 215370

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 172   gaaagaaaagaaagaacaaaccatt 196
             |||||||||||||||| ||||||||
Sbjct: 64874 gaaagaaaagaaagaaaaaaccatt 64898
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>gb|AY129241.1| Oryzias latipes strain HNI male sex-determining protein (DMRT1Y) gene,
             DMRT1Y-HNI allele, complete cds
          Length = 55500

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 176   gaaaagaaagaacaaaccatt 196
             |||||||||||||||||||||
Sbjct: 15517 gaaaagaaagaacaaaccatt 15537
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>dbj|AB251575.1| Oryzias latipes gene for mesp, complete cds
          Length = 153079

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 176    gaaaagaaagaacaaaccatt 196
              |||||||||||||||||||||
Sbjct: 141083 gaaaagaaagaacaaaccatt 141063
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>dbj|AB232918.1| Oryzias latipes hox gene cluster, complete cds
          Length = 268959

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 176    gaaaagaaagaacaaaccatt 196
              |||||||||||||||||||||
Sbjct: 230284 gaaaagaaagaacaaaccatt 230304
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>gb|AC008588.8| Homo sapiens chromosome 5 clone CTC-573M9, complete sequence
          Length = 213167

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 174    aagaaaagaaagaacaaacca 194
              |||||||||||||||||||||
Sbjct: 197177 aagaaaagaaagaacaaacca 197197
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>gb|AC008072.3| Homo sapiens BAC clone RP11-408N22 from 2, complete sequence
          Length = 206177

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 172   gaaagaaaagaaagaacaaac 192
             |||||||||||||||||||||
Sbjct: 41532 gaaagaaaagaaagaacaaac 41512
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>gb|AE014844.1| Plasmodium falciparum 3D7 chromosome 12, section 1 of 9 of the complete
              sequence
          Length = 251551

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 159    tatatatacagacgaaagaaaagaaagaa 187
              |||||||| ||| ||||||||||||||||
Sbjct: 132425 tatatatatagaagaaagaaaagaaagaa 132397
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>gb|DQ208194.1| Mayetiola destructor Mde8i18_1 gene, partial cds; Mde8i18_2, Mde8i18_3,
             Mde8i18_4, and Mde8i18_5 genes, complete cds; and
             Mde8i18_6 gene, partial cds
          Length = 42642

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 173   aaagaaaagaaagaacaaaccattccatatgtcaaaa 209
             ||||||||||||||| ||| |||||||| | ||||||
Sbjct: 14637 aaagaaaagaaagaaaaaaacattccatttttcaaaa 14601
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>emb|BX005270.7| Zebrafish DNA sequence from clone CH211-158L18 in linkage group 15,
             complete sequence
          Length = 67408

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     atattaatacactatattatt 23
             |||||||||||||||||||||
Sbjct: 37816 atattaatacactatattatt 37836
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>emb|BX005212.7| Zebrafish DNA sequence from clone DKEY-221H2 in linkage group 1, complete
              sequence
          Length = 272535

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 172    gaaagaaaagaaagaacaaac 192
              |||||||||||||||||||||
Sbjct: 227167 gaaagaaaagaaagaacaaac 227147
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>emb|AL954326.7| Zebrafish DNA sequence from clone DKEY-28N4, complete sequence
          Length = 147387

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      atattaatacactatattatt 23
              |||||||||||||||||||||
Sbjct: 113895 atattaatacactatattatt 113915
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>dbj|AP004495.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08B24, TM0027,
             complete sequence
          Length = 87135

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 173   aaagaaaagaaagaacaaacc 193
             |||||||||||||||||||||
Sbjct: 72083 aaagaaaagaaagaacaaacc 72063
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>emb|AL591913.14| Mouse DNA sequence from clone RP23-120A4 on chromosome 15, complete
             sequence
          Length = 196812

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 172   gaaagaaaagaaagaacaaac 192
             |||||||||||||||||||||
Sbjct: 49433 gaaagaaaagaaagaacaaac 49413
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>dbj|AP005019.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-169D4, complete
             sequences
          Length = 98501

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 173   aaagaaaagaaagaacaaaccattc 197
             ||||||||||||||| |||||||||
Sbjct: 23811 aaagaaaagaaagaagaaaccattc 23835
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>emb|Z50755.1|CER12H7 Caenorhabditis elegans Cosmid R12H7, complete sequence
          Length = 20975

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  agacgaaagaaaagaaagaa 187
            ||||||||||||||||||||
Sbjct: 6730 agacgaaagaaaagaaagaa 6749
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>gb|AC091170.15| Homo sapiens chromosome 18, clone RP11-879D5, complete sequence
          Length = 198586

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    gaaagaaaagaaagaacaaa 191
              ||||||||||||||||||||
Sbjct: 122781 gaaagaaaagaaagaacaaa 122800
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>gb|AC018816.6| Homo sapiens chromosome 3 clone RP11-250A15 map 3p, complete sequence
          Length = 168629

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   atacagacgaaagaaaagaa 183
             ||||||||||||||||||||
Sbjct: 76470 atacagacgaaagaaaagaa 76489
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>gb|AC127382.4| Homo sapiens BAC clone RP11-1380M11 from UL, complete sequence
          Length = 179507

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    atacagacgaaagaaaagaa 183
              ||||||||||||||||||||
Sbjct: 142281 atacagacgaaagaaaagaa 142300
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>gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, complete sequence
          Length = 216331

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    gaaagaaaagaaagaacaaa 191
              ||||||||||||||||||||
Sbjct: 157869 gaaagaaaagaaagaacaaa 157850
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>gb|AC124958.13| Medicago truncatula clone mth2-18i11, complete sequence
          Length = 120562

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 174   aagaaaagaaagaacaaaccattccata 201
             |||||||||||||||||| || ||||||
Sbjct: 44657 aagaaaagaaagaacaaagcactccata 44684
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>emb|BX546451.2| Human DNA sequence from clone WI2-8737H7 on chromosome X, complete
             sequence
          Length = 38017

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   acgaaagaaaagaaagaaca 189
             ||||||||||||||||||||
Sbjct: 31455 acgaaagaaaagaaagaaca 31474
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>emb|AL683807.22| Human DNA sequence from clone RP13-297E16 on chromosome X Contains the
             DXYS155E gene for DNA segment on chromosome X and Y
             (unique) 155 expressed sequence (XE7, XE7Y), the ASMT gene
             for acetylserotonin O-methyltransferase (ASMTY, HIOMT,
             HIOMTY), three novel genes and three CpG islands, complete
             sequence
          Length = 189825

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 172   gaaagaaaagaaagaacaaaccat 195
             ||||||||||||||||| ||||||
Sbjct: 72102 gaaagaaaagaaagaacgaaccat 72125
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>emb|AL591846.15| Human DNA sequence from clone RP11-343H5 on chromosome 1 Contains the
            LGTN gene for ligatin, the DYRK3 gene for
            dual-specificity tyrosine-(Y)-phosphorylation regulated
            kinase 3, a novel gene, the MAPKAPK2 gene for
            mitogen-activated protein kinase-activated protein kinase
            2, a ribosomal protein S14 (RPS14) pseudogene and a CpG
            island, complete sequence
          Length = 195485

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  agacgaaagaaaagaaagaa 187
            ||||||||||||||||||||
Sbjct: 9535 agacgaaagaaaagaaagaa 9554
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>emb|AL590100.6| Human DNA sequence from clone RP11-49O3 on chromosome 13 Contains a CpG
             island, complete sequence
          Length = 43138

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   agaaaagaaagaacaaacca 194
             ||||||||||||||||||||
Sbjct: 11407 agaaaagaaagaacaaacca 11426
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>emb|AL357150.7| Human DNA sequence from clone RP11-122C9 on chromosome 1p21.2-22.1
             Contains a ribosomal protein L7 (RPL7) pseudogene, the
             PTBP2 gene for polypyrimidine tract binding protein 2 and
             a CpG island, complete sequence
          Length = 187378

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   agaaaagaaagaacaaacca 194
             ||||||||||||||||||||
Sbjct: 39966 agaaaagaaagaacaaacca 39947
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>emb|AL356357.22| Human DNA sequence from clone RP4-550F15 on chromosome 1 Contains the
             KCNK1 gene for potassium channel subfamily K member 1 and
             one CpG island, complete sequence
          Length = 71371

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   agacgaaagaaaagaaagaa 187
             ||||||||||||||||||||
Sbjct: 47844 agacgaaagaaaagaaagaa 47863
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>emb|AL354661.14| Human DNA sequence from clone RP11-386D8 on chromosome 9 Contains the
              gene for a novel olfactory (seven transmembrane helix)
              receptor and the 3' end of the gene for a novel protein
              (including KIAA0368), complete sequence
          Length = 138069

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    gaaagaaaagaaagaacaaa 191
              ||||||||||||||||||||
Sbjct: 133013 gaaagaaaagaaagaacaaa 133032
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>emb|AL135842.15| Human DNA sequence from clone RP1-91G5 on chromosome 1q21.1-21.3
             Contains the 3' end of a novel gene, a novel gene, a high
             mobility group nucleosomal binding domain 3 (HMGN3)
             pseudogene, the C1orf10 gene for chromosome 1 open reading
             frame 10, the SPRL5A for small proline rich-like
             (epidermal differentiation complex) 5A and the NICE-1 gene
             for NICE-1 protein, complete sequence
          Length = 188285

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   agaaaagaaagaacaaacca 194
             ||||||||||||||||||||
Sbjct: 22433 agaaaagaaagaacaaacca 22414
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>emb|AL132868.24|HSA262P20 Human DNA sequence from clone RP11-262P20 on chromosome 4, complete
             sequence
          Length = 193444

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gaaagaaaagaaagaacaaa 191
             ||||||||||||||||||||
Sbjct: 14086 gaaagaaaagaaagaacaaa 14105
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>gb|BC016780.1| Homo sapiens, clone IMAGE:4106389, mRNA
          Length = 1410

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 agacgaaagaaaagaaagaa 187
           ||||||||||||||||||||
Sbjct: 102 agacgaaagaaaagaaagaa 83
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>emb|AJ507836.1|ANI507836 Arthrobacter nicotinovorans pAO1 plasmid sequence
          Length = 165137

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    gccgcgatggaagcccggcg 136
              ||||||||||||||||||||
Sbjct: 121635 gccgcgatggaagcccggcg 121654
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>gb|AC092904.7| Homo sapiens 3 BAC RP11-675I21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 129641

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 152   tacttggtatatatacagacgaaa 175
             ||||||||||||||||||| ||||
Sbjct: 93858 tacttggtatatatacagatgaaa 93881
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>gb|AC008622.6| Homo sapiens chromosome 19 clone CTB-147N14, complete sequence
          Length = 134882

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   aaagaaaagaaagaacaaac 192
             ||||||||||||||||||||
Sbjct: 48850 aaagaaaagaaagaacaaac 48869
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>gb|AC144474.22| Medicago truncatula clone mth2-15l5, complete sequence
          Length = 142202

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 174   aagaaaagaaagaacaaaccattccata 201
             |||||||||||||||||| || ||||||
Sbjct: 75906 aagaaaagaaagaacaaagcactccata 75879
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>gb|AC104077.2| Homo sapiens BAC clone RP11-413P19 from 4, complete sequence
          Length = 122108

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   agaaaagaaagaacaaacca 194
             ||||||||||||||||||||
Sbjct: 11554 agaaaagaaagaacaaacca 11535
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>gb|AC022367.34| Homo sapiens 12 BAC RP11-685B13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 175184

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   gaaagaaaagaaagaacaaa 191
             ||||||||||||||||||||
Sbjct: 91322 gaaagaaaagaaagaacaaa 91303
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>gb|AC005317.2| Homo sapiens chromosome 15q26.1 clone PAC pDJ457j11 containing DNA
              polymerase gamma (polg) gene, complete sequence
          Length = 170612

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    aaagaaaagaaagaacaaac 192
              ||||||||||||||||||||
Sbjct: 106431 aaagaaaagaaagaacaaac 106412
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>gb|AC093538.2| Homo sapiens chromosome 5 clone RP11-99I23, complete sequence
          Length = 200500

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   aaaccattccatatgtcaaa 208
             ||||||||||||||||||||
Sbjct: 27978 aaaccattccatatgtcaaa 27997
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>gb|AC018501.9| Homo sapiens chromosome 3 clone RP11-283K15 map 3p, complete sequence
          Length = 202070

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    atacagacgaaagaaaagaa 183
              ||||||||||||||||||||
Sbjct: 137253 atacagacgaaagaaaagaa 137272
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>gb|AC010269.6| Homo sapiens chromosome 5 clone CTC-485I21, complete sequence
          Length = 187084

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    gaaagaaaagaaagaacaaa 191
              ||||||||||||||||||||
Sbjct: 185920 gaaagaaaagaaagaacaaa 185901
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>gb|AC120057.9| Homo sapiens chromosome 17, clone CTD-2545G14, complete sequence
          Length = 198821

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    atgtcaaaagcctatgcaca 220
              ||||||||||||||||||||
Sbjct: 117689 atgtcaaaagcctatgcaca 117670
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 57      aggccgaaacaccggcggcg 76
               ||||||||||||||||||||
Sbjct: 2672775 aggccgaaacaccggcggcg 2672794
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>gb|AC019106.3| Homo sapiens BAC clone RP11-479L11 from 2, complete sequence
          Length = 198540

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    gaaagaaaagaaagaacaaa 191
              ||||||||||||||||||||
Sbjct: 151184 gaaagaaaagaaagaacaaa 151165
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>gb|AC015541.21|AC015541 Homo sapiens 3 BAC RP11-106B10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164516

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    atacagacgaaagaaaagaa 183
              ||||||||||||||||||||
Sbjct: 114575 atacagacgaaagaaaagaa 114556
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>gb|AC027176.22| Homo sapiens chromosome 15, clone RP11-493E3, complete sequence
          Length = 150800

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    gaaagaaaagaaagaacaaa 191
              ||||||||||||||||||||
Sbjct: 148397 gaaagaaaagaaagaacaaa 148378
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>gb|AC021054.28| Homo sapiens 12 BAC RP11-218M22 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 174231

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   gaaagaaaagaaagaacaaa 191
             ||||||||||||||||||||
Sbjct: 43725 gaaagaaaagaaagaacaaa 43706
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>gb|AC026162.5|AC026162 Homo sapiens chromosome 3 clone RP11-106B10 map 3p, complete sequence
          Length = 164557

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   atacagacgaaagaaaagaa 183
             ||||||||||||||||||||
Sbjct: 49974 atacagacgaaagaaaagaa 49993
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>gb|AC087284.22| Homo sapiens chromosome 15, clone RP11-617F23, complete sequence
          Length = 183773

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gaaagaaaagaaagaacaaa 191
             ||||||||||||||||||||
Sbjct: 98694 gaaagaaaagaaagaacaaa 98713
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>gb|AC091978.3| Homo sapiens chromosome 5 clone RP11-531A21, complete sequence
          Length = 192708

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   gaaagaaaagaaagaacaaa 191
             ||||||||||||||||||||
Sbjct: 55806 gaaagaaaagaaagaacaaa 55787
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>gb|AC010349.7|AC010349 Homo sapiens chromosome 5 clone CTD-2020O7, complete sequence
          Length = 165967

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   aaaccattccatatgtcaaa 208
             ||||||||||||||||||||
Sbjct: 79110 aaaccattccatatgtcaaa 79129
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>emb|BX004792.8| Zebrafish DNA sequence from clone DKEY-1J19, complete sequence
          Length = 206371

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 177    aaaagaaagaacaaaccatt 196
              ||||||||||||||||||||
Sbjct: 155160 aaaagaaagaacaaaccatt 155179
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>emb|BX284674.8| Zebrafish DNA sequence from clone DKEYP-52E12 in linkage group 20,
              complete sequence
          Length = 170998

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    aaaagaaagaacaaaccatt 196
              ||||||||||||||||||||
Sbjct: 156920 aaaagaaagaacaaaccatt 156901
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>emb|Z69664.1|CEK04D7 Caenorhabditis elegans Cosmid K04D7, complete sequence
          Length = 38799

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   gaaagaaaagaaagaacaaa 191
             ||||||||||||||||||||
Sbjct: 23006 gaaagaaaagaaagaacaaa 22987
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>emb|Z72562.1|SCYGL040C S.cerevisiae chromosome VII reading frame ORF YGL040c
          Length = 4788

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 160  atatatacagacgaaagaaaagaaagaa 187
            ||||||| ||| ||||||||||||||||
Sbjct: 3457 atatatagagaagaaagaaaagaaagaa 3484
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>emb|Z72561.1|SCYGL039W S.cerevisiae chromosome VII reading frame ORF YGL039w
          Length = 4806

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 160  atatatacagacgaaagaaaagaaagaa 187
            ||||||| ||| ||||||||||||||||
Sbjct: 2074 atatatagagaagaaagaaaagaaagaa 2101
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>emb|CT573055.2| Medicago truncatula chromosome 5 clone mth2-75o19, COMPLETE SEQUENCE
          Length = 121343

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   ttatccaaccacctcttatc 293
             ||||||||||||||||||||
Sbjct: 64663 ttatccaaccacctcttatc 64682
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>gb|AC005599.5|AC005599 Homo sapiens chromosome 4 clone C0026P05 map 4P16, complete sequence
          Length = 145173

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   aaagaaaagaaagaacaaac 192
             ||||||||||||||||||||
Sbjct: 49339 aaagaaaagaaagaacaaac 49320
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>gb|AC006226.4|AC006226 Homo sapiens chromosome 4 clone C0011C13 map 4p16, complete sequence
          Length = 162349

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   agacgaaagaaaagaaagaa 187
             ||||||||||||||||||||
Sbjct: 66286 agacgaaagaaaagaaagaa 66305
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>emb|AL133372.4|CNS01DUX Human chromosome 14 DNA sequence BAC R-269C4 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 190910

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    agaaaagaaagaacaaacca 194
              ||||||||||||||||||||
Sbjct: 137672 agaaaagaaagaacaaacca 137691
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>gb|AC005316.1|AC005316 Human Chromosome 15q26.1 PAC clone pDJ10k5 containing human DNA
             polymerase gamma (polg) gene, complete sequence
          Length = 117270

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   aaagaaaagaaagaacaaac 192
             ||||||||||||||||||||
Sbjct: 49674 aaagaaaagaaagaacaaac 49655
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>emb|AL845299.13| Mouse DNA sequence from clone RP23-375N8 on chromosome 2, complete
            sequence
          Length = 169070

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 173  aaagaaaagaaagaacaaac 192
            ||||||||||||||||||||
Sbjct: 5592 aaagaaaagaaagaacaaac 5573
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>gb|AC147644.3| Gallus gallus BAC clone CH261-77K20 from chromosome unknown, complete
             sequence
          Length = 191888

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   aaagaaaagaaagaacaaac 192
             ||||||||||||||||||||
Sbjct: 90086 aaagaaaagaaagaacaaac 90067
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>emb|Z69374.1|HSL174G8B Human DNA sequence from clone LA04NC01-174G8 on chromosome 4,
           complete sequence
          Length = 3810

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 gaaagaaaagaaagaacaaa 191
           ||||||||||||||||||||
Sbjct: 832 gaaagaaaagaaagaacaaa 851
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>emb|AL022574.7|HS1111N9 Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3,
             complete sequence
          Length = 148521

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   acgaaagaaaagaaagaaca 189
             ||||||||||||||||||||
Sbjct: 85102 acgaaagaaaagaaagaaca 85121
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>emb|AL596384.17| Mouse DNA sequence from clone RP23-353J21 on chromosome 11, complete
              sequence
          Length = 219695

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 341    gggctgctgcttccggctgc 360
              ||||||||||||||||||||
Sbjct: 186108 gggctgctgcttccggctgc 186127
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>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome
          Length = 1197687

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 216   gcacaaacacaagacacactctgc 239
             |||||||||||||||||| |||||
Sbjct: 72879 gcacaaacacaagacacaatctgc 72902
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>emb|AL121840.4|CNS01DSR Human chromosome 14 DNA sequence BAC C-2251F13 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 93432

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   agaaaagaaagaacaaacca 194
             ||||||||||||||||||||
Sbjct: 79833 agaaaagaaagaacaaacca 79814
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>gb|AC100778.5| Homo sapiens chromosome 18, clone RP11-110H1, complete sequence
          Length = 173671

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  gaaagaaaagaaagaacaaa 191
            ||||||||||||||||||||
Sbjct: 2625 gaaagaaaagaaagaacaaa 2644
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>gb|AC133637.2| Homo sapiens chromosome 15, clone CTD-2335A18, complete sequence
          Length = 61736

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   aaagaaaagaaagaacaaac 192
             ||||||||||||||||||||
Sbjct: 41860 aaagaaaagaaagaacaaac 41879


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,835,637
Number of Sequences: 3902068
Number of extensions: 4835637
Number of successful extensions: 121478
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121254
Number of HSP's gapped (non-prelim): 224
length of query: 366
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 344
effective length of database: 17,147,199,772
effective search space: 5898636721568
effective search space used: 5898636721568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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