ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl01h04 |
|---|---|
| Clone Library Name | barley_pub |
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 90.1 bits (222), Expect = 1e-18 Identities = 41/42 (97%), Positives = 42/42 (100%) Frame = -1 Query: 401 ERRNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 ERRNADP+RRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI Sbjct: 858 ERRNADPSRRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 899
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 78.6 bits (192), Expect = 3e-15 Identities = 34/42 (80%), Positives = 39/42 (92%) Frame = -1 Query: 401 ERRNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 ERRNAD R+NRCGAGVLPYEL+APSS PG+TCRGVPNS++I Sbjct: 877 ERRNADHGRKNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 918
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 61.2 bits (147), Expect = 6e-10 Identities = 24/42 (57%), Positives = 34/42 (80%) Frame = -1 Query: 401 ERRNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 + RN +P +NRCGAG++PYEL+ P S PG+T RG+PNS++I Sbjct: 855 DMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIPNSISI 896
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 53.9 bits (128), Expect = 9e-08 Identities = 23/40 (57%), Positives = 29/40 (72%) Frame = -1 Query: 395 RNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 RN D +NRCGAG+LPY+LM P S G+T G+PNS +I Sbjct: 885 RNKDRKLKNRCGAGILPYQLMKPFSDSGVTGMGIPNSTSI 924
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 53.9 bits (128), Expect = 9e-08 Identities = 23/40 (57%), Positives = 29/40 (72%) Frame = -1 Query: 395 RNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 RN D +NRCGAG+LPY+LM P S G+T G+PNS +I Sbjct: 902 RNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMGIPNSTSI 941
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 50.8 bits (120), Expect = 8e-07 Identities = 22/41 (53%), Positives = 30/41 (73%) Frame = -1 Query: 398 RRNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 +RN D + RNR G +PY L+ PSS G+TCRG+PNS++I Sbjct: 826 QRNNDESLRNRYGPVKMPYTLLYPSSEEGLTCRGIPNSISI 866
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 50.1 bits (118), Expect = 1e-06 Identities = 22/40 (55%), Positives = 28/40 (70%) Frame = -1 Query: 395 RNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 RN D RNRCG +PY L+ PSS G+T RG+PNS++I Sbjct: 818 RNNDEKLRNRCGPVQMPYTLLLPSSKEGLTFRGIPNSISI 857
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 47.0 bits (110), Expect = 1e-05 Identities = 21/40 (52%), Positives = 29/40 (72%) Frame = -1 Query: 395 RNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 RN+DP+ RNR G LPY L+ SS G+T +G+PNS++I Sbjct: 825 RNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 46.2 bits (108), Expect = 2e-05 Identities = 20/40 (50%), Positives = 27/40 (67%) Frame = -1 Query: 395 RNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 +N D RNR G +PY L+ PSS G+T RG+PNS++I Sbjct: 814 KNKDETLRNRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI 853
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 46.2 bits (108), Expect = 2e-05 Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 1/42 (2%) Frame = -1 Query: 398 RRNADPARR-NRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 RRN DP+ + NR G LPY L+ PSS G+T RG+PNS++I Sbjct: 798 RRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 45.8 bits (107), Expect = 2e-05 Identities = 21/42 (50%), Positives = 28/42 (66%) Frame = -1 Query: 401 ERRNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 + RN D +NR G +PY L+ PSS G+T RG+PNSV+I Sbjct: 818 DERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRGIPNSVSI 859
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 45.4 bits (106), Expect = 3e-05 Identities = 21/41 (51%), Positives = 28/41 (68%) Frame = -1 Query: 398 RRNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 +RN D RNR G +PY L+ PSS G+T RG+PNS++I Sbjct: 821 QRNNDEKLRNRHGPVEMPYTLLYPSSKEGLTFRGIPNSISI 861
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 45.1 bits (105), Expect = 4e-05 Identities = 21/41 (51%), Positives = 29/41 (70%) Frame = -1 Query: 398 RRNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 R+N D + NR G LPY L+ P+S G+TCRG+PNS++I Sbjct: 826 RKNNDQSLSNRLGPVQLPYTLLHPNS-EGLTCRGIPNSISI 865
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 44.7 bits (104), Expect = 5e-05 Identities = 20/42 (47%), Positives = 29/42 (69%) Frame = -1 Query: 401 ERRNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 + RN + +NR GAGV+ YEL+ P+S G+T GVP S++I Sbjct: 855 DERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 44.7 bits (104), Expect = 5e-05 Identities = 20/40 (50%), Positives = 28/40 (70%) Frame = -1 Query: 395 RNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 +N DP+ +R G LPY L+ PSS G+T RG+PNS++I Sbjct: 825 KNNDPSLYHRVGPVQLPYTLLHPSSKEGLTFRGIPNSISI 864
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 42.0 bits (97), Expect = 4e-04 Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 5/47 (10%) Frame = -1 Query: 401 ERRNADPARRNRCGAGVLPYELMAPSSGPGITCR-----GVPNSVTI 276 E N D +RRNR GAGV+PY L+ P +G + + G+PNS++I Sbjct: 886 EEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVMEMGIPNSISI 932
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 40.8 bits (94), Expect = 8e-04 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 6/45 (13%) Frame = -1 Query: 392 NADPARRNRCGAGVLPYELMAPS------SGPGITCRGVPNSVTI 276 N DP +NR G PY LM P+ + GIT RG+PNS++I Sbjct: 819 NKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 40.0 bits (92), Expect = 0.001 Identities = 19/41 (46%), Positives = 26/41 (63%) Frame = -1 Query: 398 RRNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 +RN D NR G PY L+ P+S G+T +G+PNSV+I Sbjct: 821 QRNGDNILTNRSGPVNAPYTLLFPTSEGGLTGKGIPNSVSI 861
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 38.9 bits (89), Expect = 0.003 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 6/45 (13%) Frame = -1 Query: 392 NADPARRNRCGAGVLPYELMAPSS------GPGITCRGVPNSVTI 276 N DP R+NR G PY L+ P++ G++ RG+PNS++I Sbjct: 826 NKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 38.9 bits (89), Expect = 0.003 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 10/49 (20%) Frame = -1 Query: 392 NADPARRNRCGAGVLPYELMAPSSGPG----------ITCRGVPNSVTI 276 N DP R+NR GAG++PY L+ PS G + G+PNS++I Sbjct: 888 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/39 (43%), Positives = 27/39 (69%) Frame = -1 Query: 392 NADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 N+ + +NR G +PY L+ P+S G+T +G+PNSV+I Sbjct: 821 NSHKSWKNRSGPVNVPYTLLFPTSEEGLTGKGIPNSVSI 859
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 38.5 bits (88), Expect = 0.004 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Frame = -1 Query: 395 RNADPARRNRCGAGVLPYELMAPS-SGPGITCRGVPNSVTI 276 RN D + RNR G +PY ++ P+ G+T RG+PNS++I Sbjct: 822 RNKDSSLRNRNGPVKMPYTVLLPTCEDEGLTFRGIPNSISI 862
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 38.1 bits (87), Expect = 0.005 Identities = 18/41 (43%), Positives = 26/41 (63%) Frame = -1 Query: 398 RRNADPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 276 +RN + NR G PY L+ P+S G+T +G+PNSV+I Sbjct: 820 QRNGNNILTNRTGPVNAPYTLLFPTSEGGLTGKGIPNSVSI 860
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 37.0 bits (84), Expect = 0.011 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = -1 Query: 398 RRNADPARRNRCGAGVLPYELMAPSSGPGITCRGV 294 ++N D RNR G +PY L+ PSS G+T RG+ Sbjct: 707 QKNNDETLRNRTGPAKMPYTLLYPSSEEGLTFRGI 741
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 36.6 bits (83), Expect = 0.015 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 6/45 (13%) Frame = -1 Query: 392 NADPARRNRCGAGVLPYELMAPS------SGPGITCRGVPNSVTI 276 N DP +NR G PY L+ P+ + G+T +G+PNS++I Sbjct: 818 NHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862
>DHX34_HUMAN (Q14147) Probable ATP-dependent RNA helicase DHX34 (EC 3.6.1.-)| (DEAH box protein 34) Length = 576 Score = 35.8 bits (81), Expect = 0.025 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = -2 Query: 385 TPPGATAVAPACCRTSSWRRRPGRASPAEASRT 287 TPP ++ AP CC SW RP A+ AE +RT Sbjct: 545 TPPASSLAAPRCCTHRSW--RPATATEAETTRT 575
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 35.4 bits (80), Expect = 0.033 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 6/45 (13%) Frame = -1 Query: 392 NADPARRNRCGAGVLPYELMAPSSGP------GITCRGVPNSVTI 276 N D +NR G PY L+ P++ GIT +G+PNS++I Sbjct: 822 NGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 34.7 bits (78), Expect = 0.056 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 7/46 (15%) Frame = -1 Query: 392 NADPARRNRCGAGVLPYELMAPSS-------GPGITCRGVPNSVTI 276 N + A +NR G +PY L+ P++ G G+T G+PNS++I Sbjct: 832 NGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877
>PCP1_YEAST (P53259) Rhomboid protein 1, mitochondrial precursor (EC| 3.4.21.105) (Processing of cytochrome c peroxidase protein 1) (Mitochondrial distribution and morphology protein 37) Length = 346 Score = 31.6 bits (70), Expect = 0.47 Identities = 20/77 (25%), Positives = 34/77 (44%) Frame = +3 Query: 48 YTFHHISMSQLLNRKKCN*IFSYLGPNQWRFGLRGEGPNQWRFSYMYVLFPETFPAQSIS 227 Y F H+ N +++ LG N FGL + P WRF Y+L + + IS Sbjct: 127 YLFEHVPPFTYFKTHPKNLVYALLGINVAVFGL-WQLPKCWRFLQKYMLLQKDYVTSKIS 185 Query: 228 RLKNSHGPLQFTLCGLD 278 + ++ +F G++ Sbjct: 186 IIGSAFSHQEFWHLGMN 202
>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic| serine protease) (Membrane-type mosaic serine protease) Length = 581 Score = 30.8 bits (68), Expect = 0.81 Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 2/39 (5%) Frame = -2 Query: 385 TPPGATAVAPAC-CRTSSWRRRPGRASPAEAS-RTASPS 275 TPPG + A A T R PGRASPA+AS ASP+ Sbjct: 49 TPPGRASPAQASPAGTPPGRASPGRASPAQASPARASPA 87 Score = 30.8 bits (68), Expect = 0.81 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 4/47 (8%) Frame = -2 Query: 385 TPPGATAVAPAC-CRTSSWRRRPGRASPAEASRTASP---SSPQRVN 257 TPPG + A A + S PGRASPA+AS +P +SP R + Sbjct: 29 TPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGRASPGRAS 75
>Y1013_HAEIN (Q57151) Hypothetical protein HI1013| Length = 258 Score = 30.8 bits (68), Expect = 0.81 Identities = 20/67 (29%), Positives = 29/67 (43%) Frame = +3 Query: 126 NQWRFGLRGEGPNQWRFSYMYVLFPETFPAQSISRLKNSHGPLQFTLCGLDGDAVRDASA 305 N+ F R E + F Y+ L+P +PAQ + + + HG GD + Sbjct: 13 NEVPFLDRFEAAAKAGFKYVEFLWPYDYPAQELKAILDKHGLKVVLFNTPAGDVNKGEWG 72 Query: 306 GDARPGR 326 G A PGR Sbjct: 73 GSAIPGR 79
>ABF2_BACSU (P94552) Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55) (Arabinosidase| 2) Length = 495 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 201 ETFPAQSISRLKNSHGPLQFTLCGLD 278 ETFP SIS K + G + T+C +D Sbjct: 395 ETFPQISISASKQAEGDINITICNID 420
>PARE_HAEIN (P43703) DNA topoisomerase 4 subunit B (EC 5.99.1.-) (Topoisomerase| IV subunit B) Length = 632 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +2 Query: 209 PGPKYIEAEKFPRSASIHSLRARW*RCSG 295 P PKY ++ KF S H LRA+ CSG Sbjct: 169 PNPKYFDSAKFSVSRLRHLLRAKAVLCSG 197
>PRIA_RHORU (P05445) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase| priA) (Replication factor Y) Length = 811 Score = 28.9 bits (63), Expect = 3.1 Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = +3 Query: 234 KNSHGPLQFTLCGL-DGDAVRDASAGDARPGRRRHELVRQHAG--ATAVAPGGVSV 392 K H PL TL G+ DGD + GD R R H+L+ Q AG A PG V + Sbjct: 629 KGHHFPL-ITLVGVVDGDL--GLTGGDLRASERTHQLLHQVAGRAGRAERPGRVLI 681
>BGAL_PSEHA (P81650) Beta-galactosidase (EC 3.2.1.23) (Lactase)| (Beta-D-galactoside galactohydrolase) Length = 1038 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +3 Query: 120 GPNQWRFGLR-GEGPNQWRFSYMYVLFPETFPAQSISRLKNSHGPLQFTL 266 G + W +G G+ N +F +LFP+ P S+ K S LQFTL Sbjct: 580 GKHYWAYGGDFGDELNDRQFCINGLLFPDRTPHPSLFEAKYSQQHLQFTL 629
>ARGC_MORAB (Q9K4Z1) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 336 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = -1 Query: 179 RESPLIWALAPKAESPLIWAQIGEDLIAFFSVQKL---GHANMVECVN 45 R +P I A+ A L W Q G+DLI ++ L A ++C+N Sbjct: 277 RRTPSIKAVEKTAYYDLAWQQQGQDLIVVSAIDNLLKGAAAQAMQCIN 324
>HXA13_HUMAN (P31271) Homeobox protein Hox-A13 (Hox-1J)| Length = 388 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/52 (34%), Positives = 23/52 (44%) Frame = -2 Query: 400 SGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSSPQRVN*SGP 245 S A A A A A +SS P + AEA++ SP S + SGP Sbjct: 115 SAAAAAAAAAAAAAAAAAASSSGGPGPAGPAAAEAAKQCSPCSAAAQSSSGP 166
>BGAL_KLEPN (P06219) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1034 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +3 Query: 132 WRFGLR-GEGPNQWRFSYMYVLFPETFPAQSISRLKNSHGPLQFTLCGLDGDAVRDASAG 308 W +G G+ PN +F ++FP+ P S+ K++ QFTL VR S Sbjct: 593 WAYGGDFGDKPNDRQFCMNGLVFPDRTPHPSLVEAKHAQQYFQFTLLSTSPLRVRIISEY 652 Query: 309 DARP 320 RP Sbjct: 653 LFRP 656
>C71A9_SOYBN (O81970) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1)| Length = 499 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +3 Query: 204 TFPAQSISRLKNSHGPLQFTLCG 272 T P QS+ L N HGPL F G Sbjct: 51 TLPHQSLQYLSNKHGPLMFLQLG 73
>ZFN2B_MOUSE (Q91X58) AN1-type zinc finger protein 2B| Length = 257 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -2 Query: 373 ATAVAPACCRTSSWRRRPGRASPAEASRTASP 278 +T+ AP+ RT P RA+P +RTASP Sbjct: 157 STSTAPSPSRTLPSSSSPSRATPQLPTRTASP 188
>HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 Length = 863 Score = 28.1 bits (61), Expect = 5.2 Identities = 21/55 (38%), Positives = 27/55 (49%) Frame = -2 Query: 382 PPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSSPQRVN*SGPWEFFSLDIL 218 P GA A +PA + P R PA +RTA+P SP R + + P LD L Sbjct: 800 PHGAPAPSPAASARPASSSTP-RLGPAPTTRTAAP-SPDRRDSASPGAASGLDPL 852
>FOG1_MOUSE (O35615) Zinc finger protein ZFPM1 (Zinc finger protein multitype| 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1) Length = 995 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Frame = -2 Query: 400 SGATLTPP--GATAVAPACCRT----------SSWRRRPGRASPAEASRTASPSSPQRV 260 +G T PP G ++ +PA RT ++ PG P SRT SP SP V Sbjct: 446 NGETRVPPQNGGSSESPAAPRTIKVEAAEEPEATRASGPGEPGPQAPSRTPSPHSPNPV 504
>HXA13_MOUSE (Q62424) Homeobox protein Hox-A13 (Hox-1.10)| Length = 386 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/52 (34%), Positives = 23/52 (44%) Frame = -2 Query: 400 SGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSSPQRVN*SGP 245 S A A A A A +SS P + AEA++ SP S + SGP Sbjct: 115 SAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAAQSSSGP 166
>PDC6I_RAT (Q9QZA2) Programmed cell death 6-interacting protein| (ALG-2-interacting protein 1) (Fragment) Length = 401 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -2 Query: 394 ATLTPPGATAVAPACCRTSSWR--RRPGRASPAEASRTASPSSP 269 A PP A A APA T+S + PG A P +A P+ P Sbjct: 297 ANRVPPAAAATAPAGVGTASAAPPQTPGSAPPPQAQGPPYPTYP 340
>VGLB_BHV1C (P12640) Glycoprotein I precursor (Glycoprotein GVP-6)| (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130) (Glycoprotein B) Length = 932 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 4/43 (9%) Frame = +3 Query: 279 GDAVRDASAGDARPGRRRH----ELVRQHAGATAVAPGGVSVA 395 G A R A AGD R G+RRH ++ G A GG A Sbjct: 5 GGAERAAGAGDGRRGQRRHLRPGRVLAALRGPAAPGAGGARAA 47
>MDR10_ARATH (Q9SGY1) Multidrug resistance protein 10 (P-glycoprotein 10)| Length = 1316 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -2 Query: 100 LHFFLFKSWDMLIWW 56 LHF LF SW +LIW+ Sbjct: 303 LHFVLFLSWALLIWF 317
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = -2 Query: 400 SGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSSPQR 263 SG P A A A A R P ASPA +S + PS+ R Sbjct: 143 SGPRPPTPAALAAAEAGAPGGPGRSSPSAASPASSSGSPGPSAAPR 188
>VGLB_BHV1P (P17471) Glycoprotein I precursor (Glycoprotein GVP-6)| (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130) Length = 928 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 4/43 (9%) Frame = +3 Query: 279 GDAVRDASAGDARPGRRRH----ELVRQHAGATAVAPGGVSVA 395 G A R A AGD R G+RRH ++ G A GG A Sbjct: 5 GGAERAAGAGDGRRGQRRHLRPGRVLAALRGPAAPGAGGARAA 47
>OPGD1_RALSO (Q8XUX6) Glucans biosynthesis protein D 1 precursor| Length = 535 Score = 27.7 bits (60), Expect = 6.8 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 10/70 (14%) Frame = -2 Query: 388 LTPPGATAVAPACCRT----SSWRRRPGRASPAEASRTASPSSPQRVN*SGPWEFFSL-- 227 LTP A+AV+PA T +W RR RA A R + + P + G W+ + Sbjct: 21 LTPSTASAVSPASAATEPFDEAWLRRRARALAAGPYRKRNTALPPPLAALG-WDAYQSIG 79 Query: 226 ----DILWAG 209 LWAG Sbjct: 80 ARADHALWAG 89
>DENR_CAEEL (Q9NAH4) Density-regulated protein homolog| Length = 192 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/47 (27%), Positives = 26/47 (55%) Frame = +2 Query: 119 GPKSMAIRPSGRGPKSMAILLYVRTFP*DVPGPKYIEAEKFPRSASI 259 GP+ + ++ RG KS+ ++ + TF D+ + A+KF +S+ Sbjct: 106 GPQKVTLQREPRGKKSVTVIKGLATFDIDLKVASKLFAQKFACGSSV 152
>ASCL2_RAT (P19360) Achaete-scute homolog 2| Length = 260 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/52 (38%), Positives = 26/52 (50%) Frame = -2 Query: 400 SGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSSPQRVN*SGP 245 SG LTP AT + C + S ASPA AS + + +SP R+ S P Sbjct: 185 SGGLLTP--ATRPSDVCTQPS--------ASPASASLSCTSTSPDRLGCSEP 226
>SWC5_USTMA (Q4P6D5) SWR1-complex protein 5| Length = 376 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -2 Query: 400 SGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSSPQ 266 S +P T+ APA ++S P SPA S ++SPS PQ Sbjct: 245 SSQIASPTSTTSSAPAPSASAS---APLPTSPASTSTSSSPSRPQ 286
>GLMU_ZYMMO (Q5NQ83) Bifunctional protein glmU [Includes:| UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)] Length = 450 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/30 (33%), Positives = 17/30 (56%) Frame = +1 Query: 133 GDSAFGARAQINGDSLICTYFSLRRSRPKV 222 GD+ GA + I G ++ C Y +SR ++ Sbjct: 358 GDATIGAGSNIGGGTITCNYDGFNKSRTEI 387
>OR22B_DROME (P81910) Odorant receptor 22b| Length = 397 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 10/71 (14%) Frame = +3 Query: 54 FHHISMSQLLNRKKCN*IFSYLGPNQWRFGLRGEGPNQWRFSY----------MYVLFPE 203 F HI L R K F YL W FG +W Y +++L P Sbjct: 6 FPHIKEKPLSERVKSRDAFVYLDRVMWSFGWTVPENKRWDLHYKLWSTFVTLVIFILLPI 65 Query: 204 TFPAQSISRLK 236 + + I R K Sbjct: 66 SVSVEYIQRFK 76
>COG4_HUMAN (Q9H9E3) Conserved oligomeric Golgi complex component 4| Length = 785 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +3 Query: 3 SICRNLLTIGTYEIIYTFHHIS-MSQLLNRKKCN*IFSYLGPNQWRFGLRGEGPNQWRFS 179 S+ L T+ T+ I F +S M+ +LN ++ I Y GPN GP WR + Sbjct: 710 SLIAYLTTVTTWTIRDKFARLSQMATILNLERVTEILDYWGPN--------SGPLTWRLT 761
>DAPF_PSEAE (Q51564) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 276 Score = 27.3 bits (59), Expect = 8.9 Identities = 9/19 (47%), Positives = 15/19 (78%) Frame = -3 Query: 168 IDLGPRPEGRIAIDLGPDR 112 I+L RP+G++ +D+GP R Sbjct: 106 IELNIRPDGQVTVDMGPPR 124
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Frame = -2 Query: 394 ATLTPPGATAVA--PACCRTSSWRRRPGRASPAEASRTASPSS-PQRVN 257 +T T P AT+V P+ ++W R +P TA+PSS P+ V+ Sbjct: 3198 STATTPTATSVTAIPSSSLGTAWTRLSQTTTPTATMSTATPSSTPETVH 3246
>FUSA_BURCE (P24126) Fusaric acid resistance protein fusA precursor| Length = 530 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -2 Query: 379 PGATAVAPACCRTSSWRRRPGRASP 305 PG A+ P R + RRPGRA P Sbjct: 380 PGGRAIQPDDRRRAQGHRRPGRADP 404
>ATHB4_ARATH (P92953) Homeobox-leucine zipper protein ATHB-4 (HD-ZIP protein| ATHB-4) Length = 318 Score = 27.3 bits (59), Expect = 8.9 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 5/59 (8%) Frame = -2 Query: 388 LTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPS-----SPQRVN*SGPWEFFSL 227 +TPP + P+C R SS A S T +P+ SPQR+ PW SL Sbjct: 261 MTPPTTLTMCPSCERVSS----SAATVTAAPSTTTTPTVVGRPSPQRLT---PWTAISL 312
>HSF8_LYCPE (P41153) Heat shock factor protein HSF8 (Heat shock transcription| factor 8) (HSTF 8) (Heat stress transcription factor) Length = 527 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +3 Query: 138 FGLRGEGPNQWRFSYMYVLFPETFPAQSISRLKNSHGPLQ 257 +G R P++W F+ L + +SISR K +HG Q Sbjct: 100 YGFRKVDPDRWEFANEGFLRGQKHLLKSISRRKPAHGHAQ 139
>HSF8_LYCES (Q40152) Heat shock factor protein HSF8 (Heat shock transcription| factor 8) (HSTF 8) (Heat stress transcription factor) Length = 527 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +3 Query: 138 FGLRGEGPNQWRFSYMYVLFPETFPAQSISRLKNSHGPLQ 257 +G R P++W F+ L + +SISR K +HG Q Sbjct: 98 YGFRKVDPDRWEFANEGFLRGQKHLLKSISRRKPAHGHAQ 137
>CRLF1_HUMAN (O75462) Cytokine receptor-like factor 1 precursor (Cytokine-like| factor 1) (CLF-1) (ZcytoR5) Length = 422 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = +1 Query: 283 TLFGTPRQVMPGPDDGAMSSYGSTPAPQRLRR 378 T TPR PGP GA G P+ +RR Sbjct: 334 TAASTPRSERPGPGGGACEPRGGEPSSGPVRR 365
>ARGC_MORPR (Q9K4Z6) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 336 Score = 27.3 bits (59), Expect = 8.9 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 7/82 (8%) Frame = -1 Query: 269 AESELKRTVGIFQPRYTLGRERLREKYVHIRESPLIW----ALAPKAESPLIWAQIGEDL 102 A +K G+ + T + + +R P W A+ A L W Q G+DL Sbjct: 243 ATINVKLAAGVTPEQVTAAYQEAYQDQPMVRLLPSGWPSIKAVEKTAYCDLAWQQQGQDL 302 Query: 101 IAFFSVQKL---GHANMVECVN 45 I ++ L A ++C+N Sbjct: 303 IVVSAIDNLLKGAAAQAMQCIN 324 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,885,856 Number of Sequences: 219361 Number of extensions: 1472473 Number of successful extensions: 4543 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 4333 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4525 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
