ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl01h02 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 189 bits (479), Expect = 3e-48 Identities = 91/91 (100%), Positives = 91/91 (100%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN Sbjct: 768 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 827 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN Sbjct: 828 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 858
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 157 bits (398), Expect = 8e-39 Identities = 76/91 (83%), Positives = 82/91 (90%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 L+EVLSKHSSDE+YLGQRDTP WTSD +ALE F+RFSDRLVEIE KVVGMN D LKNRN Sbjct: 772 LIEVLSKHSSDEVYLGQRDTPAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRN 831 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GPA+FPYMLLYPNTSD GAAAG+TAKGIPN Sbjct: 832 GPAEFPYMLLYPNTSDVTGAAAGITAKGIPN 862
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 153 bits (386), Expect = 2e-37 Identities = 71/91 (78%), Positives = 82/91 (90%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 L+E+LSKHS+DE+YLGQRDTPEWTSDPKALE FKRFS +LVEIESKV+ MN DP LKNR Sbjct: 769 LIEILSKHSADEIYLGQRDTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRV 828 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GPA FPY L++PNTSD+KGAA G+TA+GIPN Sbjct: 829 GPANFPYTLMFPNTSDNKGAAEGITARGIPN 859
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 147 bits (370), Expect = 1e-35 Identities = 71/91 (78%), Positives = 76/91 (83%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 LLE+LSKHSSDE+YLGQRDTPEWTSD KALE FKRF RL EIES+VV MN DP KNR Sbjct: 776 LLEILSKHSSDEVYLGQRDTPEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRV 835 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GP FPY LLYPNTSD KG AAGL+A+GIPN Sbjct: 836 GPTNFPYTLLYPNTSDLKGDAAGLSARGIPN 866
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 134 bits (336), Expect = 1e-31 Identities = 65/92 (70%), Positives = 74/92 (80%), Gaps = 1/92 (1%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 L+E+LSKHSSDE+YLGQRDTPEWTSD KAL+ FKRF RLV+IE+++ MN + LKNRN Sbjct: 782 LIEILSKHSSDEVYLGQRDTPEWTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRN 841 Query: 250 GPAKFPYMLLYPNTSD-HKGAAAGLTAKGIPN 158 GP K PYMLLYPNTSD K GLTA GIPN Sbjct: 842 GPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPN 873
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 110 bits (274), Expect = 2e-24 Identities = 49/91 (53%), Positives = 69/91 (75%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 ++E+LS+H+SDELYLG+RD P WTSD +ALE FK+F ++L EIE K+ N+D +L+NR+ Sbjct: 773 VIEILSRHASDELYLGERDNPNWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRH 832 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GP + PY LLYP++ + GLT +GIPN Sbjct: 833 GPVEMPYTLLYPSSKE------GLTFRGIPN 857
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 109 bits (272), Expect = 3e-24 Identities = 50/91 (54%), Positives = 65/91 (71%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 ++E+LS+H+SDE+YLGQRD P WT++ KAL+ FKRF +L EIE K++G N D L+NRN Sbjct: 773 VIEILSRHASDEVYLGQRDNPNWTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRN 832 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GP K PY +L P D GLT +GIPN Sbjct: 833 GPVKMPYTVLLPTCEDE-----GLTFRGIPN 858
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 107 bits (267), Expect = 1e-23 Identities = 49/91 (53%), Positives = 64/91 (70%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 ++E+LS+H+SDE+YLG+R+TP WT+D KALE FKRF +L IE K+ N DP L+NR Sbjct: 776 VIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRT 835 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GP + PY LL H+ + GLT KGIPN Sbjct: 836 GPVQLPYTLL------HRSSEEGLTFKGIPN 860
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 104 bits (260), Expect = 8e-23 Identities = 48/91 (52%), Positives = 65/91 (71%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 ++E+LS+H+SDE+YLGQRD P WTSD KAL+ F++F ++L EIE K+ N+D L NR Sbjct: 778 VIEILSRHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRL 837 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GP + PY LL+PN+ GLT +GIPN Sbjct: 838 GPVQLPYTLLHPNSE-------GLTCRGIPN 861
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 104 bits (259), Expect = 1e-22 Identities = 50/92 (54%), Positives = 68/92 (73%), Gaps = 1/92 (1%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELK-NR 254 ++E+LS H+SDE+YLGQRD P WTSD KAL+ F++F ++L EIE K+V N+DP L+ NR Sbjct: 750 VIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNR 809 Query: 253 NGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GP + PY LLYP++ + GLT +GIPN Sbjct: 810 LGPVQLPYTLLYPSSEE------GLTFRGIPN 835
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 103 bits (258), Expect = 1e-22 Identities = 47/91 (51%), Positives = 68/91 (74%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 ++E+LS+H+SDE+YLG+RD P WTSD +ALE FKRF ++L +IE+K+ N+D +L+NR Sbjct: 769 VIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRC 828 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GP + PY LL P++ + GLT +GIPN Sbjct: 829 GPVQMPYTLLLPSSKE------GLTFRGIPN 853
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 103 bits (258), Expect = 1e-22 Identities = 46/91 (50%), Positives = 68/91 (74%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 ++E+LS+H+SDE+YLGQR+ P WTSD KAL+ F++F ++L EIE+K+ N+DP L +R Sbjct: 776 VIEILSRHASDEVYLGQRENPHWTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRV 835 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GP + PY LL+P++ + GLT +GIPN Sbjct: 836 GPVQLPYTLLHPSSKE------GLTFRGIPN 860
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 99.4 bits (246), Expect = 3e-21 Identities = 50/92 (54%), Positives = 64/92 (69%), Gaps = 1/92 (1%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPE-WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNR 254 ++E+LS+H+SDE YLGQRD + WTSD LE FKRF +L EIE K++ N D L+NR Sbjct: 764 VIEILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNR 823 Query: 253 NGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GPAK PY LLYP++ + GLT +GIPN Sbjct: 824 YGPAKMPYTLLYPSSEE------GLTFRGIPN 849
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 96.7 bits (239), Expect = 2e-20 Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 1/90 (1%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPE-WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNR 254 ++E+LS+H+SDE+YLG+RD + WTSD LE FKRF +L EIE K+V N+D L+NR Sbjct: 658 VIEILSRHASDEIYLGERDGGDHWTSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNR 717 Query: 253 NGPAKFPYMLLYPNTSDHKGAAAGLTAKGI 164 GPAK PY LLYP++ + GLT +GI Sbjct: 718 TGPAKMPYTLLYPSSEE------GLTFRGI 741
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 95.9 bits (237), Expect = 4e-20 Identities = 44/91 (48%), Positives = 61/91 (67%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 L+E+LS+H++DE+YLGQR++PEWT D + L F RF +L +IE +++ N D L NR+ Sbjct: 773 LVEILSRHTTDEIYLGQRESPEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRS 832 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GP PY LL+P + GLT KGIPN Sbjct: 833 GPVNAPYTLLFPTSE------GGLTGKGIPN 857
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 94.7 bits (234), Expect = 8e-20 Identities = 43/91 (47%), Positives = 62/91 (68%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 L+E+LS+H++DE+YLGQR++PEWT D + L F+RF ++L +IE +++ N + L NR Sbjct: 772 LIEILSRHTTDEIYLGQRESPEWTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRT 831 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GP PY LL+P + GLT KGIPN Sbjct: 832 GPVNAPYTLLFPTSE------GGLTGKGIPN 856
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 94.4 bits (233), Expect = 1e-19 Identities = 44/91 (48%), Positives = 62/91 (68%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 L+E+LS HSSDE+YLGQRD+ EW ++ +ALE F++F +++ EIE + N D LKNR Sbjct: 771 LIEILSTHSSDEVYLGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRT 830 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 G K PY LL+P++ G+T +GIPN Sbjct: 831 GLVKMPYTLLFPSSE------GGVTGRGIPN 855
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 93.6 bits (231), Expect = 2e-19 Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 1/92 (1%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQR-DTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNR 254 ++EVLS+H+SDE YLG+R + +WT+D E FKRF +L EIE K+ N+D L+NR Sbjct: 777 IIEVLSRHASDEQYLGERIEGDDWTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNR 836 Query: 253 NGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GP K PY LLYP++ + GLT +GIPN Sbjct: 837 YGPVKMPYTLLYPSSEE------GLTCRGIPN 862
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 91.7 bits (226), Expect = 7e-19 Identities = 44/91 (48%), Positives = 60/91 (65%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 + EV S+H+SDE+YLGQRD+ EWT D + L F+RF L +IE++++ MN KNR+ Sbjct: 771 IFEVSSRHASDEVYLGQRDSIEWTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRS 830 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 GP PY LL+P + + GLT KGIPN Sbjct: 831 GPVNVPYTLLFPTSEE------GLTGKGIPN 855
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 71.6 bits (174), Expect = 7e-13 Identities = 40/91 (43%), Positives = 50/91 (54%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 +L+VLS HS+DE YLG T W SD + F+ RL EIE + G N D +LKNR Sbjct: 853 VLDVLSTHSTDEEYLGGEQTRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRC 912 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 G PY L+ P + AG+T GIPN Sbjct: 913 GAGILPYQLMKPFSD------AGVTGMGIPN 937
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 70.9 bits (172), Expect = 1e-12 Identities = 39/91 (42%), Positives = 50/91 (54%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 +L+VLS HS+DE YLG T W SD + F+ RL EIE + G N D +LKNR Sbjct: 836 VLDVLSSHSTDEEYLGGEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRC 895 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 G PY L+ P + +G+T GIPN Sbjct: 896 GAGILPYQLMKPFSD------SGVTGMGIPN 920
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 70.9 bits (172), Expect = 1e-12 Identities = 37/90 (41%), Positives = 51/90 (56%) Frame = -1 Query: 427 LEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNG 248 L++LS HS DE Y+G+ P W ++P F++FS RL E E + N++PE KNR G Sbjct: 809 LDILSSHSPDEEYMGEYAEPAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCG 868 Query: 247 PAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 PY LL P + G+T +GIPN Sbjct: 869 AGIVPYELLKPFSE------PGVTGRGIPN 892
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 68.2 bits (165), Expect = 8e-12 Identities = 33/91 (36%), Positives = 51/91 (56%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 +++ LS HS+DE YLG+R WT+DP AL + F+ + E ++ N DP +NR Sbjct: 811 VIDTLSTHSADEEYLGERPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRC 870 Query: 250 GPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 G PY L+ P+ + G+T +G+PN Sbjct: 871 GAGVLPYELMAPS------SGPGITCRGVPN 895
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 67.4 bits (163), Expect = 1e-11 Identities = 31/76 (40%), Positives = 46/76 (60%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRN 251 +L++LS HSSDE Y+G + P WT D + F+ F + +I +V N+DP+ KNR+ Sbjct: 838 ILDLLSTHSSDEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRH 897 Query: 250 GPAKFPYMLLYPNTSD 203 G PY+LL P+ D Sbjct: 898 GAGMVPYVLLRPSDGD 913
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 58.2 bits (139), Expect = 8e-09 Identities = 31/90 (34%), Positives = 47/90 (52%) Frame = -1 Query: 427 LEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNG 248 L++LS H+SDE Y+G P W D + + F+ F ++ +I +V N D +NR+G Sbjct: 840 LDLLSSHASDEEYMGTHQEPAWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHG 899 Query: 247 PAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 PY+LL P + A + GIPN Sbjct: 900 AGVVPYVLLRPLNGNPMDAKT-VMEMGIPN 928
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 58.2 bits (139), Expect = 8e-09 Identities = 33/89 (37%), Positives = 48/89 (53%) Frame = -1 Query: 427 LEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNG 248 L++LS HS DE Y+G++ W ++P F+RF +L +E + N + LKNR G Sbjct: 809 LDLLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAG 868 Query: 247 PAKFPYMLLYPNTSDHKGAAAGLTAKGIP 161 Y LL P TS+H G+T G+P Sbjct: 869 AGVVKYELLKP-TSEH-----GVTGMGVP 891
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 50.1 bits (118), Expect = 2e-06 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 3/94 (3%) Frame = -1 Query: 430 LLEVLSKHSSDELYLGQ-RDTP--EWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELK 260 +++ LS HS DE YLG+ RD WT+D A+ F+ + E + N D K Sbjct: 827 VVDTLSTHSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRK 886 Query: 259 NRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPN 158 NR G PY LL P+ + G+T +G+PN Sbjct: 887 NRCGAGVLPYELLAPS------SPPGVTCRGVPN 914
>COL19_CAEEL (P18835) Cuticle collagen 19 precursor| Length = 289 Score = 37.7 bits (86), Expect = 0.012 Identities = 27/70 (38%), Positives = 32/70 (45%), Gaps = 5/70 (7%) Frame = -3 Query: 356 GPKGPGGVQAVQRPAGGDREQG-GGHEP*PGAQEPQ----RPG*VSLHAALPQHLRPQGR 192 GPKGP G+ PAGG+ +G G PG Q PQ RPG A P P+G Sbjct: 150 GPKGPSGLPGSAGPAGGNGRRGPPGPVGGPGEQGPQGDAGRPG----AAGRPGPAGPRGE 205 Query: 191 RCRAYRQGHP 162 Y+ G P Sbjct: 206 PGTEYKPGQP 215
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 34.7 bits (78), Expect = 0.098 Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 13/100 (13%) Frame = -3 Query: 422 GAVEALLRRAVPRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 GA+ + R P GH G GP G G+ PAGG +Q GG++ Q R Sbjct: 1066 GAIGPVGHRGSP---GHLG-PAGPPGSPGLPGPAGPAGGGYDQSGGYDEYRADQPSFRAK 1121 Query: 242 *V-------SLHAALPQHLRPQG------RRCRAYRQGHP 162 SL++ + L P+G R CR R HP Sbjct: 1122 DYEVDATIKSLNSQIENLLTPEGSKKNPARTCRDIRLSHP 1161
>GLGA_PROMA (Q7VBP0) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial| glycogen] synthase) Length = 501 Score = 33.5 bits (75), Expect = 0.22 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = -1 Query: 418 LSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKN 257 L K + ++Y +R E+ + K + +K S +E+E VG + DP LKN Sbjct: 429 LQKRAMTQMYSWERSAMEYETMYKEVSGYKEPSPDAIEVEKFSVGQDADPSLKN 482
>SPD2_NEPCL (P46804) Spidroin 2 (Dragline silk fibroin 2) (Fragment)| Length = 627 Score = 32.7 bits (73), Expect = 0.37 Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 9/70 (12%) Frame = -3 Query: 377 GHAGVDLGPKGPGGVQAVQRPAGGDREQG-GGHEP--------*PGAQEPQRPG*VSLHA 225 G+ GP GPG A A G +QG GG+ P PG Q P PG + A Sbjct: 150 GYGPGQQGPSGPGSAAAAAAAASGPGQQGPGGYGPGQQGPGGYGPGQQGPSGPGSAAAAA 209 Query: 224 ALPQHLRPQG 195 A QG Sbjct: 210 AAASGPGQQG 219 Score = 30.0 bits (66), Expect = 2.4 Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 8/75 (10%) Frame = -3 Query: 422 GAVEALLRRAVPRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP--------*PG 267 G+ A A P G G G +GP G + A GG+ P PG Sbjct: 350 GSASAAAAAAGPGQQGPGGYGPGQQGPSGPGSASAAAAAAAAGPGGYGPGQQGPGGYAPG 409 Query: 266 AQEPQRPG*VSLHAA 222 Q P PG S AA Sbjct: 410 QQGPSGPGSASAAAA 424 Score = 30.0 bits (66), Expect = 2.4 Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 12/80 (15%) Frame = -3 Query: 425 GGAVEALLRRAVPRAAGHAGVDLGPKGPGGV-----------QAVQRPAGGDREQG-GGH 282 G A A + P G G G +GPGG A A G +QG GG+ Sbjct: 203 GSAAAAAAAASGPGQQGPGGYGPGQQGPGGYGPGQQGLSGPGSAAAAAAAGPGQQGPGGY 262 Query: 281 EP*PGAQEPQRPG*VSLHAA 222 PG Q P PG + AA Sbjct: 263 G--PGQQGPSGPGSAAAAAA 280 Score = 30.0 bits (66), Expect = 2.4 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Frame = -3 Query: 383 AAGHAGVDLGPKGPGGVQAVQRPAGG--DREQG-GGHEP*PGAQEPQRPG*VSLHAALPQ 213 A+ A + G +GPGG Q+ GG +QG GG+ P G Q P PG + AA Sbjct: 115 ASAAASAESGQQGPGGYGPGQQGPGGYGPGQQGPGGYGP--GQQGPSGPGSAAAAAAAAS 172 Query: 212 HLRPQG 195 QG Sbjct: 173 GPGQQG 178 Score = 29.6 bits (65), Expect = 3.2 Identities = 18/45 (40%), Positives = 21/45 (46%) Frame = -3 Query: 356 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG*VSLHAA 222 G GPG A AG ++ GG+ PG Q P PG S AA Sbjct: 345 GGYGPGSASAAAAAAGPGQQGPGGYG--PGQQGPSGPGSASAAAA 387 Score = 29.6 bits (65), Expect = 3.2 Identities = 22/58 (37%), Positives = 25/58 (43%) Frame = -3 Query: 395 AVPRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG*VSLHAA 222 A AAG G G +GPGG G +QG G PG Q P PG + AA Sbjct: 31 AAAAAAGPGGYGPGQQGPGGY--------GPGQQGPGRYG-PGQQGPSGPGSAAAAAA 79 Score = 29.3 bits (64), Expect = 4.1 Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 7/59 (11%) Frame = -3 Query: 377 GHAGVDLGPKGPGGVQAVQRPAG------GDREQG-GGHEP*PGAQEPQRPG*VSLHAA 222 G+A GP GPG A A G +QG GG+ PG Q P PG + AA Sbjct: 405 GYAPGQQGPSGPGSASAAAAAAAAGPGGYGPGQQGPGGYA--PGQQGPSGPGSAAAAAA 461 Score = 28.9 bits (63), Expect = 5.4 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 4/49 (8%) Frame = -3 Query: 377 GHAGVDLGPKGPGGVQAVQRPAGGDREQG-GGHEP---*PGAQEPQRPG 243 G+ GP GPG A A G +QG GG+ P PG P + G Sbjct: 191 GYGPGQQGPSGPGSAAAAAAAASGPGQQGPGGYGPGQQGPGGYGPGQQG 239
>PAX6_DROME (O18381) Paired box protein Pax-6 (Protein eyeless)| Length = 857 Score = 32.3 bits (72), Expect = 0.49 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = +2 Query: 275 MVHAHHLALDLHQPVAEPLEHLQGLWVRGPLRRVPLPEVQLVGGV 409 +VH +H AL HQ + P H G W L +P+ + V Sbjct: 303 LVHGNHQALQQHQQQSWPPRHYSGSWYPTSLSEIPISSAPNIASV 347
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 32.0 bits (71), Expect = 0.64 Identities = 24/62 (38%), Positives = 26/62 (41%), Gaps = 13/62 (20%) Frame = -3 Query: 389 PRAAGHAGVDLG---PKGPGGVQAVQRPA--GGDRE--------QGGGHEP*PGAQEPQR 249 PR G G G P+GPGG RP GG+R QGGG P PG Sbjct: 243 PRPGGPGGAPGGGPRPQGPGGQGGGPRPQAPGGNRPSPGSMPRPQGGGAGPRPGGGPRPN 302 Query: 248 PG 243 PG Sbjct: 303 PG 304 Score = 30.8 bits (68), Expect = 1.4 Identities = 20/49 (40%), Positives = 22/49 (44%) Frame = -3 Query: 389 PRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 P A G G +GPGG A + GG R GGG PG RPG Sbjct: 310 PAAGPRPGPGGGGRGPGG--AGRPGGGGGRPGGGGFAGRPGGGGGGRPG 356
>HYDL_STRCO (P42534) Putative polyketide hydroxylase (EC 1.14.13.-) (WhiE ORF| VIII) Length = 627 Score = 31.6 bits (70), Expect = 0.83 Identities = 18/43 (41%), Positives = 18/43 (41%) Frame = -3 Query: 377 GHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQR 249 G G GP GPGG P G GGG PG PQR Sbjct: 428 GGPGGTGGPGGPGGPGGPDGPRGAGGAPGGGPGGGPGGGGPQR 470
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 31.6 bits (70), Expect = 0.83 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Frame = -3 Query: 389 PRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGH----EP*PGAQEPQRP 246 P GH LGP+GP G Q +Q P G QG H + PG+Q Q P Sbjct: 723 PGPQGH----LGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGP 770 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = -3 Query: 272 PGAQEPQRPG*VSLHAALPQHLRPQGRRCRAYRQGHPQQH 153 PGA E +RPG P+ R +GRR ++R+G P +H Sbjct: 1074 PGAWEGRRPGDERFPRD-PEDPRFRGRREESFRRGAPPRH 1112
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 31.2 bits (69), Expect = 1.1 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = -3 Query: 392 VPRAAGHAGVD--LGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 +P AAG G GP GP G+ + PA G+R G P A EP R G Sbjct: 478 LPGAAGERGAPGFRGPAGPNGIPGEKGPA-GERGAPGPAGPRGAAGEPGRDG 528 Score = 29.3 bits (64), Expect = 4.1 Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 2/51 (3%) Frame = -3 Query: 389 PRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*P--GAQEPQRPG 243 P G D GP GP G+Q + G E G EP P A P PG Sbjct: 622 PTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPG 672
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 31.2 bits (69), Expect = 1.1 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 9/58 (15%) Frame = -3 Query: 392 VPRAAGHAGVD--LGPKGPGGVQAVQRPAG--GDREQGG-----GHEP*PGAQEPQRP 246 +P A G G++ GP GP G V+ PAG GDR G G + PGA P P Sbjct: 1738 LPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGP 1795 Score = 28.1 bits (61), Expect = 9.2 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 7/67 (10%) Frame = -3 Query: 422 GAVEALLRRAVPRAAGHAGV--DLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQ---- 261 GA+ R P G AG + GP GP G + + AG +G P P + Sbjct: 1474 GAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEK 1533 Query: 260 -EPQRPG 243 EP RPG Sbjct: 1534 GEPGRPG 1540
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 31.2 bits (69), Expect = 1.1 Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 13/87 (14%) Frame = -3 Query: 380 AGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG*VSLHAALPQ---- 213 AG G GP GP G P+GG + G G E Q ++P + A L Sbjct: 1074 AGFTG-PAGPPGPPGPPGHAGPSGGGYDGGDGGEYYRADQPERKPKDYEVDATLKSLNQQ 1132 Query: 212 ---HLRPQG------RRCRAYRQGHPQ 159 L P+G R CR R HP+ Sbjct: 1133 IEVILTPEGSRKNPARTCRDLRLSHPE 1159
>RNP4_AERPE (Q9YD20) Ribonuclease P protein component 4 (EC 3.1.26.5) (RNase P| component 4) Length = 103 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = -3 Query: 377 GHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*P 270 G G D G + G Q R G D QGGGH+ P Sbjct: 65 GSGGRDSGEREDKGPQGPPRQGGRDNRQGGGHQGGP 100
>COL8_CAEEL (P18833) Cuticle collagen 8 precursor| Length = 282 Score = 30.8 bits (68), Expect = 1.4 Identities = 27/75 (36%), Positives = 32/75 (42%), Gaps = 1/75 (1%) Frame = -3 Query: 389 PRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQ-EPQRPG*VSLHAALPQ 213 P G +G+ +GP GP G Q P G QGG PG Q + RPG A P Sbjct: 143 PGPRGPSGL-VGPAGPAGDQGRHGPPGPTGGQGG-----PGEQGDAGRPG----AAGCPG 192 Query: 212 HLRPQGRRCRAYRQG 168 P+G YR G Sbjct: 193 PPGPRGEPGTEYRPG 207
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.8 bits (68), Expect = 1.4 Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Frame = -3 Query: 389 PRAAGHAGVDLGPKG---PGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 P A G+ G D G KG P GVQ PAG + ++G EP P P PG Sbjct: 425 PGAPGNKG-DTGAKGEPGPAGVQGPPGPAGEEGKRGARGEPGPSGL-PGPPG 474 Score = 28.1 bits (61), Expect = 9.2 Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 10/62 (16%) Frame = -3 Query: 398 RAVPRAAGHAGVD--LGPKGPGGVQAVQRPAGGDREQGGGHEP----*PGAQ----EPQR 249 R P + G G D GPKGP G + PAG G P PGA+ P Sbjct: 476 RGGPGSRGFPGADGVAGPKGPSGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGS 535 Query: 248 PG 243 PG Sbjct: 536 PG 537
>CSP_PLAYO (P06914) Circumsporozoite protein precursor (CS)| Length = 367 Score = 30.4 bits (67), Expect = 1.9 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = -3 Query: 353 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRP 246 P+GPG Q P G QG G P Q PQ+P Sbjct: 204 PQGPGAPQGPGAPQGPGAPQGPGAPQEPPQQPPQQP 239 Score = 30.0 bits (66), Expect = 2.4 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 353 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 P+GPG Q P G QG G PGA PQ PG Sbjct: 192 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 226 Score = 30.0 bits (66), Expect = 2.4 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 353 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 P+GPG Q P G QG G PGA PQ PG Sbjct: 186 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 220 Score = 30.0 bits (66), Expect = 2.4 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 353 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 P+GPG Q P G QG G PGA PQ PG Sbjct: 180 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 214 Score = 30.0 bits (66), Expect = 2.4 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 353 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 P+GPG Q P G QG G PGA PQ PG Sbjct: 174 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 208 Score = 30.0 bits (66), Expect = 2.4 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 353 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 P+GPG Q P G QG G PGA PQ PG Sbjct: 168 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 202 Score = 30.0 bits (66), Expect = 2.4 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 353 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 P+GPG Q P G QG G PGA PQ PG Sbjct: 162 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 196 Score = 30.0 bits (66), Expect = 2.4 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 353 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 P+GPG Q P G QG G PGA PQ PG Sbjct: 156 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 190 Score = 30.0 bits (66), Expect = 2.4 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 353 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 P+GPG Q P G QG G PGA PQ PG Sbjct: 150 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 184 Score = 30.0 bits (66), Expect = 2.4 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 353 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 P+GPG Q P G QG G PGA PQ PG Sbjct: 144 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 178 Score = 29.3 bits (64), Expect = 4.1 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = -3 Query: 353 PKGPGGVQAVQRPAGGDREQGGGHEP*PGA--QEPQRP 246 P+GPG Q P G QG G PGA + PQ+P Sbjct: 198 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGAPQEPPQQP 235
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 30.4 bits (67), Expect = 1.9 Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Frame = -3 Query: 389 PRAAGHAGVDLGPKGPG--GVQAVQRPAGGDREQGG-GHEP*PGAQEPQRPG 243 P G+ G GP GPG G PAG D G G PGA E PG Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPG 218 Score = 28.9 bits (63), Expect = 5.4 Identities = 18/50 (36%), Positives = 19/50 (38%) Frame = -3 Query: 395 AVPRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRP 246 A P G AG GP GP G GG E G + PG P P Sbjct: 177 AGPSGPGPAGPP-GPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGP 225
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 30.4 bits (67), Expect = 1.9 Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = -3 Query: 389 PRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGG-GHEP*PGAQEPQRPG*VSLHAALPQ 213 P G AGVD GP GP G Q G +QG G + PG Q P P P Sbjct: 663 PGQPGMAGVD-GPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGP---------PG 712 Query: 212 HLRPQGR 192 PQG+ Sbjct: 713 EKGPQGK 719
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 30.4 bits (67), Expect = 1.9 Identities = 18/47 (38%), Positives = 20/47 (42%) Frame = -3 Query: 383 AAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 AAG GP P G A+ AG G G P PG +P PG Sbjct: 147 AAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPG 193 Score = 28.5 bits (62), Expect = 7.1 Identities = 20/61 (32%), Positives = 25/61 (40%) Frame = -3 Query: 428 AGGAVEALLRRAVPRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQR 249 A GA+ + P A AG +G G A + P G GGG PG P+R Sbjct: 54 AAGALGNHVVSGSPAGAAGAGPAAPAEGAPGA-APEPPPAGRARPGGGGPQRPGPPSPRR 112 Query: 248 P 246 P Sbjct: 113 P 113
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 30.4 bits (67), Expect = 1.9 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Frame = -3 Query: 389 PRAAGHAGVDLGPKG---PGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRP 246 P AG G + GPKG P GVQ PAG + ++G E PG P P Sbjct: 273 PGIAGFKG-EQGPKGEPGPAGVQGAPGPAGEEGKRGARGE--PGGAGPAGP 320
>COAA1_CHICK (P08125) Collagen alpha-1(X) chain precursor| Length = 674 Score = 30.4 bits (67), Expect = 1.9 Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 8/73 (10%) Frame = -3 Query: 389 PRAAGHAGVDL----GPKGPGGVQAVQRPAGGDREQG----GGHEP*PGAQEPQRPG*VS 234 P G AG+ + GP+GP G Q + P G E G G + G P RPG Sbjct: 137 PGIPGPAGLSVLGKPGPQGPPGAQGPRGPPGEKGEPGVPGINGQKGEMGFGVPGRPG--- 193 Query: 233 LHAALPQHLRPQG 195 + LP PQG Sbjct: 194 -NRGLPGPQGPQG 205
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Frame = -3 Query: 377 GHAGVD--LGPKGPGGVQAVQRPAGGDREQGGGHEP 276 G AG +GP GP G + +Q P G ++G EP Sbjct: 1020 GEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEP 1055 Score = 28.5 bits (62), Expect = 7.1 Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Frame = -3 Query: 425 GGAVEALLRRAVPRAAGHA--GVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQ 252 GG A + AG A GV GP GP G + PAG QG P EP Sbjct: 107 GGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNP----GEPG 162 Query: 251 RPG 243 PG Sbjct: 163 EPG 165
>SYI_CHLTR (O84022) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1036 Score = 30.0 bits (66), Expect = 2.4 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = -1 Query: 427 LEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDP 269 + + K S DE LGQ P W D ++ E + S + +VG +++P Sbjct: 242 VRIKDKESGDEYILGQESLPRWFPDRESYEWIGQLSGK------SLVGQSYEP 288
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 30.0 bits (66), Expect = 2.4 Identities = 25/57 (43%), Positives = 26/57 (45%), Gaps = 9/57 (15%) Frame = -3 Query: 389 PRAAGHAGVDLGPK--GPGGVQAVQRPAGG----DREQG--GGHEP*PGAQ-EPQRP 246 PR G AG GP+ G GG RP GG R QG GG P PG PQ P Sbjct: 239 PRPGG-AGAPGGPRPQGAGGQDRAPRPQGGPGGAPRPQGGPGGARPTPGGMPRPQAP 294
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.0 bits (66), Expect = 2.4 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = -3 Query: 389 PRAAGHAGVDLGPKG---PGGVQAVQRPAGGDREQGGGHEP*P 270 P A G+ G D G KG P GVQ PAG + ++G EP P Sbjct: 425 PGAPGNKG-DTGAKGEPGPAGVQGPPGPAGEEGKRGARGEPGP 466
>PRPP_HUMAN (P81489) Salivary proline-rich protein II-1 (Fragment)| Length = 174 Score = 30.0 bits (66), Expect = 2.4 Identities = 19/67 (28%), Positives = 28/67 (41%) Frame = -3 Query: 356 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG*VSLHAALPQHLRPQGRRCRAY 177 GP P G + P GG++ QG P +EP G P +P+GR + Sbjct: 53 GPPPPPGKPEGRPPQGGNQSQGPPPHPPGKPEEPPPQGGNQSQGTPPPPGKPEGRPPQQG 112 Query: 176 RQGHPQQ 156 G P++ Sbjct: 113 GPGKPER 119
>PO4F1_HUMAN (Q01851) POU domain, class 4, transcription factor 1| (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Oct-T1) (Homeobox/POU domain protein RDC-1) Length = 423 Score = 29.6 bits (65), Expect = 3.2 Identities = 18/43 (41%), Positives = 18/43 (41%) Frame = -3 Query: 383 AAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEP 255 AAG G GP G GG P GG GGG P G P Sbjct: 140 AAGGGGAHDGPGGGGGPGGGGGPGGGGPGGGGGGGPGGGGGGP 182
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 29.6 bits (65), Expect = 3.2 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -3 Query: 356 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 GP+ GG RP GG R QGG + GA +R G Sbjct: 274 GPRPQGG----PRPQGGSRPQGGSAQGAQGAPSQERQG 307
>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)| (EBNA-1) Length = 641 Score = 29.6 bits (65), Expect = 3.2 Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 5/85 (5%) Frame = -3 Query: 428 AGGAVEALLRRAVPRAAGHAGVDLGPKGPGGV-----QAVQRPAGGDREQGGGHEP*PGA 264 AGGA R + G G +G GG + +R GG RE+ G G Sbjct: 319 AGGAGAGGGGRGRGGSGGRGRGGSGGRGRGGSGGRRGRGRERARGGSRERARGRGRGRGE 378 Query: 263 QEPQRPG*VSLHAALPQHLRPQGRR 189 + P+ P S + P P GRR Sbjct: 379 KRPRSPSSQSSSSGSPPRRPPPGRR 403
>RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 573 Score = 29.6 bits (65), Expect = 3.2 Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Frame = -3 Query: 428 AGGAVEALLRRA-VPRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHE--P*PGAQE 258 AG +V + R A RAA A G GPGG A + +GG R G G + P P ++ Sbjct: 410 AGDSVGTIFREAREQRAADEARRGGGRSGPGG--ASRSGSGGGRRDGAGADGKPRPPRRK 467 Query: 257 PQRPG 243 P+ G Sbjct: 468 PRVEG 472
>VGLB_BHV1C (P12640) Glycoprotein I precursor (Glycoprotein GVP-6)| (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130) (Glycoprotein B) Length = 932 Score = 29.3 bits (64), Expect = 4.1 Identities = 16/47 (34%), Positives = 20/47 (42%) Frame = -3 Query: 428 AGGAVEALLRRAVPRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGG 288 + G +E L A P+ P PGG A PA GD + GG Sbjct: 482 SNGTLEGLFAAAAPKPGPRRARRAAPSAPGGPGAANGPA-GDGDAGG 527
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 29.3 bits (64), Expect = 4.1 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Frame = -3 Query: 389 PRAAGHAGVDLGPKG---PGGVQAVQRPAGGDREQGGGHEP 276 P AG G D GPKG P G Q PAG + ++G EP Sbjct: 430 PGIAGFKG-DQGPKGETGPAGPQGAPGPAGEEGKRGARGEP 469
>NBR1_HUMAN (Q14596) Next to BRCA1 gene 1 protein (Neighbor of BRCA1 gene 1| protein) (Membrane component, chromosome 17, surface marker 2) (1A1-3B) Length = 966 Score = 29.3 bits (64), Expect = 4.1 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = -3 Query: 383 AAGHAGVDLGPKGPGGVQAVQRPA-GGDREQGGGHEP 276 A G++ G +G GV+A Q PA G+R GG ++P Sbjct: 754 ALSQPGLERGAEGKPGVEAGQEPAEAGERLPGGENQP 790
>TTDN1_HUMAN (Q8TAP9) TTD nonphotosensitive 1 protein| Length = 179 Score = 29.3 bits (64), Expect = 4.1 Identities = 17/55 (30%), Positives = 21/55 (38%) Frame = -3 Query: 317 PAGGDREQGGGHEP*PGAQEPQRPG*VSLHAALPQHLRPQGRRCRAYRQGHPQQH 153 P GG G PG P+ P + + P H P G R R Y H +H Sbjct: 16 PGGGGWGSGSSFRGTPGGGGPRPPSPRDGYGS-PHHTPPYGPRSRPYGSSHSPRH 69
>NBR1_PONPY (Q5RC94) Next to BRCA1 gene 1 protein (Neighbor of BRCA1 gene 1| protein) Length = 894 Score = 29.3 bits (64), Expect = 4.1 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = -3 Query: 383 AAGHAGVDLGPKGPGGVQAVQRPA-GGDREQGGGHEP 276 A G++ G +G GV+A Q PA G+R GG ++P Sbjct: 682 ALSQPGLERGAEGEPGVEAGQEPAEAGERLPGGENQP 718
>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor| Length = 684 Score = 29.3 bits (64), Expect = 4.1 Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = -3 Query: 377 GHAGVDLGPKGPGGVQAVQRPAGGDREQG-GGHEP*PGAQEPQRP 246 G AG +LG GP G V AG E+G GH GA PQ P Sbjct: 352 GRAG-ELGEAGPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGP 395 Score = 28.1 bits (61), Expect = 9.2 Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 10/66 (15%) Frame = -3 Query: 356 GPKGPGGVQAVQRPAGGDREQG----GGHEP*PGAQEPQ-RPG*VSLHA-----ALPQHL 207 GP GP G+ + P G EQG G + PG P PG V L LP L Sbjct: 181 GPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPL 240 Query: 206 RPQGRR 189 P G R Sbjct: 241 GPPGDR 246
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 29.3 bits (64), Expect = 4.1 Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Frame = -3 Query: 362 DLGPKGPGGVQAVQRPAG--GDREQGGGHEP*PGAQEPQRPG*VSLHAALPQHLRPQGRR 189 DLGP G GV + G GD GG P + EP PG P P G Sbjct: 1266 DLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGAPG-------PPGKRGPSGHM 1318 Query: 188 CRAYRQG 168 R R+G Sbjct: 1319 GREGREG 1325
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 29.3 bits (64), Expect = 4.1 Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 25/102 (24%) Frame = -3 Query: 389 PRAAGHAGV--DLGPKGPGGVQAVQRPAGGDREQGGGHE-----P*PGAQEPQRPG*V-- 237 P A G AG+ G +GP G P G GGG+E A +P+ P + Sbjct: 1069 PGAVGPAGIRGSQGSQGPAGPPGPPGPPGPPGPSGGGYEFGFDGDFYRADQPRSPTSLRP 1128 Query: 236 ----------SLHAALPQHLRPQG------RRCRAYRQGHPQ 159 SL+ + L P+G R CR R HP+ Sbjct: 1129 KDYEVDATLKSLNNQIETLLTPEGSRKNPARTCRDLRLSHPE 1170
>RS5_GLOVI (Q7NEG9) 30S ribosomal protein S5| Length = 223 Score = 29.3 bits (64), Expect = 4.1 Identities = 13/23 (56%), Positives = 13/23 (56%) Frame = -3 Query: 356 GPKGPGGVQAVQRPAGGDREQGG 288 GP GPGG Q P DRE GG Sbjct: 17 GPGGPGGPGPEQAPEDPDRESGG 39
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 29.3 bits (64), Expect = 4.1 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Frame = -3 Query: 395 AVPRAAGHAGVDLG--PKGPGGVQAVQRP-AGGDREQGGGHEP*PGAQEPQRPG 243 A+P+ G G P PGG RP GG +GGG P GA P G Sbjct: 258 AMPQRTPRPGPSAGGRPGRPGGAPGAGRPGGGGGGYRGGGGAPGAGAGAPAGGG 311
>COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor| Length = 680 Score = 29.3 bits (64), Expect = 4.1 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -3 Query: 392 VPRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP 276 +P A G G+ +GP GP G + + P G D + G EP Sbjct: 357 IPGAKGEIGL-VGPAGPPGARGARGPPGLDGKTGYPGEP 394
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 29.3 bits (64), Expect = 4.1 Identities = 27/81 (33%), Positives = 30/81 (37%), Gaps = 18/81 (22%) Frame = -3 Query: 377 GHAGVD--LGPKGPGGVQAVQRPAGGDREQGGGHEP*PG--------------AQEPQRP 246 GHAG+ G GP G Q P G QGG E P A E +P Sbjct: 511 GHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGPAGEVGKP 570 Query: 245 G*VSLHA--ALPQHLRPQGRR 189 G LH LP P+G R Sbjct: 571 GERGLHGEFGLPGPAGPRGER 591
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 29.3 bits (64), Expect = 4.1 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Frame = -3 Query: 380 AGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQ--EPQRPG 243 AG G D GP GP G+Q + G E G EP P + P PG Sbjct: 625 AGDKG-DSGPPGPQGLQGIPGTGGPPGENGKPGEPGPKGEVGAPGAPG 671
>DYHC_PARTE (Q27171) Dynein heavy chain, cytosolic (DYHC) (DHC08)| Length = 4540 Score = 28.9 bits (63), Expect = 5.4 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -1 Query: 397 ELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMN 278 +L +GQ WT + K+F+D++ E+E V G+N Sbjct: 773 QLQIGQGFNYLWTHKTQLQPYVKKFTDKVFELEQAVNGLN 812
>CBPA1_PIG (P09954) Carboxypeptidase A1 precursor (EC 3.4.17.1)| Length = 419 Score = 28.9 bits (63), Expect = 5.4 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 7/40 (17%) Frame = +2 Query: 323 EPLEHLQGLWVRGPLR-------RVPLPEVQLVGGVLRQH 421 E LEHLQ + RGP R RVP P +Q V L H Sbjct: 43 EDLEHLQLDFWRGPARPGFPIDVRVPFPSIQAVKVFLEAH 82
>SYN3_RAT (O70441) Synapsin-3 (Synapsin III)| Length = 579 Score = 28.9 bits (63), Expect = 5.4 Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 2/92 (2%) Frame = -3 Query: 425 GGAVEALLRRAVPRAAGHAGVDLGPKGP--GGVQAVQRPAGGDREQGGGHEP*PGAQEPQ 252 G +V + LR P+ G GP G Q P GG R+ AQ PQ Sbjct: 399 GASVPSPLRPWGPQTKSAKSPGQGQLGPLLGQPQPRPPPQGGPRQ----------AQSPQ 448 Query: 251 RPG*VSLHAALPQHLRPQGRRCRAYRQGHPQQ 156 P + Q L PQG++ + + G PQQ Sbjct: 449 PP---RSRSPSQQRLSPQGQQPVSPQSGSPQQ 477
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 28.9 bits (63), Expect = 5.4 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Frame = -3 Query: 383 AAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*P--GAQEPQRPG 243 A G G D GP GP G+Q + +G E G EP P A P PG Sbjct: 624 APGDKG-DAGPPGPQGLQGIPGTSGPPGENGKPGEPGPKGEAGAPGVPG 671
>SYI_CHLCV (Q822L8) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1043 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/53 (28%), Positives = 27/53 (50%) Frame = -1 Query: 427 LEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDP 269 + V K S ++ LGQ W SDP + E+ + F + + +VG +++P Sbjct: 245 VRVADKVSGEQWILGQGCLSRWFSDPDSYEILESF------LGTALVGKSYEP 291
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 28.9 bits (63), Expect = 5.4 Identities = 17/44 (38%), Positives = 19/44 (43%) Frame = -3 Query: 389 PRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQE 258 P G G D G GP G +Q P G GG EP P Q+ Sbjct: 1132 PGQKGSKG-DKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQ 1174 Score = 28.9 bits (63), Expect = 5.4 Identities = 28/81 (34%), Positives = 32/81 (39%), Gaps = 4/81 (4%) Frame = -3 Query: 398 RAVPRAAGHAGVDLGPKGPGGVQAVQRPAG--GDREQGGGHEP--*PGAQEPQRPG*VSL 231 R +P A G G+ KG G Q Q P G G+R G P PG PQ P + Sbjct: 1030 RGLPGAQGAPGL----KGGEGPQGPQGPVGSPGERGSAGAAGPIGLPGRPGPQGPPGPAG 1085 Query: 230 HAALPQHLRPQGRRCRAYRQG 168 P PQG R QG Sbjct: 1086 EKGAPGEKGPQGPAGRDGVQG 1106 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = -3 Query: 389 PRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQE 258 P AAG AG+ GP G G + P G + G EP P Q+ Sbjct: 1285 PGAAGPAGIK-GPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQD 1327 Score = 28.1 bits (61), Expect = 9.2 Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Frame = -3 Query: 356 GPKGPGGVQAVQRPAG--GDREQGGGHEP--*PGAQEPQRPG*VSLHAALPQHLRPQGRR 189 GP GP G + + P G G + GG P PG + PQ P P P G Sbjct: 881 GPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGP---QGPVGFPGPKGPPGPA 937 Query: 188 CRAYRQGHPQQ 156 + GHP Q Sbjct: 938 GKDGLPGHPGQ 948
>CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor| Length = 1691 Score = 28.9 bits (63), Expect = 5.4 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = -3 Query: 377 GHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP-*PGAQEPQRP 246 G +GV G KG G+Q P G + E+GG EP PG P P Sbjct: 914 GRSGVP-GLKGDNGLQGQPGPPGPEGEKGGKGEPGLPGPPGPVDP 957
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 5.4 Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 10/62 (16%) Frame = -3 Query: 398 RAVPRAAGHAGVD--LGPKGPGGVQAVQRPAGGDREQGGGHEP----*PGAQ----EPQR 249 R P + G G D GPKGP G + PAG G P PGA+ P Sbjct: 476 RGGPGSRGFPGADGVAGPKGPSGERGAPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGS 535 Query: 248 PG 243 PG Sbjct: 536 PG 537 Score = 28.9 bits (63), Expect = 5.4 Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = -3 Query: 389 PRAAGHAGVDLGPKG-PG--GVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 P A G+ G D G KG PG GVQ PAG + ++G EP P P PG Sbjct: 425 PGAPGNKG-DTGAKGEPGATGVQGPPGPAGEEGKRGARGEPGPSGL-PGPPG 474
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 28.9 bits (63), Expect = 5.4 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = -3 Query: 389 PRAAGHAGVDLGPKG---PGGVQAVQRPAGGDREQGGGHEP*P 270 P A G+ G D G KG P G+Q PAG + ++G EP P Sbjct: 432 PGAPGNKG-DTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGP 473 Score = 28.1 bits (61), Expect = 9.2 Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 10/62 (16%) Frame = -3 Query: 398 RAVPRAAGHAGVD--LGPKGPGGVQAVQRPAGGDREQGGGHEP----*PGAQ----EPQR 249 R P + G G D GPKGP G + PAG G P PGA+ P Sbjct: 483 RGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGS 542 Query: 248 PG 243 PG Sbjct: 543 PG 544
>CO8A1_RABIT (P14282) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 28.9 bits (63), Expect = 5.4 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Frame = -3 Query: 389 PRAAGHAGV--DLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEP 255 P G G D GPKGP G +Q P G E+G G PG + P Sbjct: 213 PGLPGQPGAKGDRGPKGPPGPPGLQGPKG---EKGFGMPGLPGLKGP 256
>CAD16_MOUSE (O88338) Cadherin-16 precursor (Kidney-specific cadherin)| (Ksp-cadherin) Length = 830 Score = 28.5 bits (62), Expect = 7.1 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -1 Query: 292 VVGMNHDPELKNRNGPAKF 236 V G++ DP+L NRNGP F Sbjct: 688 VSGVSEDPDLANRNGPYSF 706
>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2| Length = 916 Score = 28.5 bits (62), Expect = 7.1 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = -3 Query: 353 PKGPGGVQ-AVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 P PG + RP GG R+ GGG PG Q QRPG Sbjct: 202 PPRPGSPRIGAPRPGGGQRQGGGGR---PGFQ--QRPG 234
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.5 bits (62), Expect = 7.1 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = -3 Query: 356 GPKGPGGVQAVQRPAGGDREQG-GGHEP*PGAQEPQRP 246 GP GP G+Q + P+G E G GG PG P+ P Sbjct: 1150 GPPGPIGLQGLPGPSGEKGETGDGGPMGPPGPPGPRGP 1187
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 28.5 bits (62), Expect = 7.1 Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Frame = -3 Query: 425 GGAVEALLRRAVPRAAGHA--GVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQ 252 GG A + AG A GV GP GP G + PAG QG P EP Sbjct: 108 GGNFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNP----GEPG 163 Query: 251 RPG 243 PG Sbjct: 164 EPG 166 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Frame = -3 Query: 377 GHAGVD--LGPKGPGGVQAVQRPAGGDREQGGGHEP 276 G AG +GP GP G + + P G ++G EP Sbjct: 1021 GEAGAQGPMGPSGPAGARGIAGPQGPRGDKGEAGEP 1056
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 28.5 bits (62), Expect = 7.1 Identities = 20/49 (40%), Positives = 22/49 (44%) Frame = -3 Query: 389 PRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 243 P AG G D G G GV + P GG E+G P P A P PG Sbjct: 614 PGPAGQPG-DKGESGAPGVPGIAGPRGGPGERGEQGPPGP-AGFPGAPG 660
>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 28.5 bits (62), Expect = 7.1 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%) Frame = -3 Query: 362 DLGPKGPGGVQAVQRPAG--GDREQGG--GHEP*PGAQEPQ 252 D+GP+GP GVQ PAG G R + G G PG P+ Sbjct: 587 DVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPK 627
>SCAP_HUMAN (Q12770) Sterol regulatory element-binding protein| cleavage-activating protein (SREBP cleavage-activating protein) (SCAP) Length = 1278 Score = 28.5 bits (62), Expect = 7.1 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = -3 Query: 389 PRAAGHAGVDLGPKGPGGVQA 327 P AGH + GPKGPGGVQA Sbjct: 684 PIPAGHW--EAGPKGPGGVQA 702
>HEPA_EHV1V (Q6S6V0) DNA helicase/primase complex-associated protein| Length = 716 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = -3 Query: 422 GAVEALLRRAVPRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGH 282 G + A L+RAV A + + LG G+ RPA E GG H Sbjct: 67 GGITAALKRAVGSFAFYQPLVLGINTQTGLLVTLRPAASAGEGGGDH 113
>HEPA_EHV1B (P28946) DNA helicase/primase complex-associated protein| Length = 716 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = -3 Query: 422 GAVEALLRRAVPRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGH 282 G + A L+RAV A + + LG G+ RPA E GG H Sbjct: 67 GGITAALKRAVGSFAFYQPLVLGINTQTGLLVTLRPAASAGEGGGDH 113
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 28.5 bits (62), Expect = 7.1 Identities = 31/102 (30%), Positives = 37/102 (36%), Gaps = 21/102 (20%) Frame = -3 Query: 401 RRAVPRAAGHAGV--DLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGA------QEPQRP 246 R +P G AGV G +GP G P G GGG+E A Q RP Sbjct: 1065 RNGLPGPIGPAGVRGSHGSQGPAGPPGPPGPPGPPGPNGGGYEVGFDAEYYRADQPSLRP 1124 Query: 245 G*VSLHAAL-------PQHLRPQG------RRCRAYRQGHPQ 159 + A L L P+G R CR R HP+ Sbjct: 1125 KDYEVDATLKTLNNQIETLLTPEGSKKNPARTCRDLRLSHPE 1166
>SQT1_CAEEL (P12114) Cuticle collagen sqt-1 (Protein squat-1) (Protein| roller-5) Length = 324 Score = 28.1 bits (61), Expect = 9.2 Identities = 21/49 (42%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Frame = -3 Query: 386 RAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP--*PGAQEPQRP 246 R A H GPKGP G Q PAG Q G H P PG P+ P Sbjct: 230 RDAEHPIGGPGPKGPRGDQGPTGPAG----QNGLHGPPGEPGTVGPEGP 274
>PMP3_MOUSE (P05143) Proline-rich protein MP-3 (Fragment)| Length = 296 Score = 28.1 bits (61), Expect = 9.2 Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Frame = -3 Query: 356 GPKGPGGVQAVQRPAGGDREQGGGHE------P*PGAQEPQRPG*VSLHAALPQHLRPQG 195 GP PGG Q QRP G GG + P PG +P RP A PQ PQG Sbjct: 100 GPPPPGGPQ--QRPPQGPPPPGGPQQRPPQGPPPPGGPQP-RPPQGPPPPAGPQPRPPQG 156
>SYV_TRIVA (P46216) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) (Fragment) Length = 489 Score = 28.1 bits (61), Expect = 9.2 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +2 Query: 251 VAVLELRVMVHAHHLALDLHQPVAEPLEHLQGLWVRGPLRRVPLPEVQ 394 +A L M+ +A++ P HL G++V P+R VP+P +Q Sbjct: 156 IATTRLETMLGDTAVAIN---PKDARYNHLHGMYVWHPIREVPIPIIQ 200
>EMID1_HUMAN (Q96A84) EMI domain-containing protein 1 precursor (Protein Emu1)| (Emilin and multimerin domain-containing protein 1) Length = 441 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = -3 Query: 392 VPRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQR 249 VP + GH +GP GP G + + G E+G EP P QR Sbjct: 313 VPGSPGH----IGPPGPTGPKGISGHPGEKGERGLRGEPGPQGSAGQR 356
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.1 bits (61), Expect = 9.2 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 10/79 (12%) Frame = -3 Query: 398 RAVPRAAGHAGVDLGPKGP------GGVQAVQRPAGGDREQGGGHEP*PGAQE--PQRPG 243 R +P +G G+ LGPKGP GV+ + P G G EP P Q+ P G Sbjct: 600 RGLPGESGPRGL-LGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQG 658 Query: 242 *VSLHAALPQH--LRPQGR 192 A+ H PQG+ Sbjct: 659 LPGPQGAIGPHGEKGPQGK 677
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 28.1 bits (61), Expect = 9.2 Identities = 30/106 (28%), Positives = 37/106 (34%), Gaps = 25/106 (23%) Frame = -3 Query: 401 RRAVPRAAGHAGV--DLGPKGPGGVQAVQRPAGGDREQGGGHE----------P*PGAQE 258 R P G AGV G +GP G P G GGG++ P +Q Sbjct: 1073 RSGQPGPVGPAGVRGSQGSQGPAGPPGPPGPPGPPGVSGGGYDFGFEGDFYRADQPRSQP 1132 Query: 257 PQRPG*VSLHAALPQ-------HLRPQG------RRCRAYRQGHPQ 159 RP + A L L P+G R CR R HP+ Sbjct: 1133 SLRPKDYEVDATLKSLNNQIETLLTPEGSRKNPARTCRDLRLSHPE 1178
>GRK2_CAEEL (Q09639) G protein-coupled receptor kinase 2 (EC 2.7.11.16)| Length = 707 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = -1 Query: 406 SSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGP 245 +SDE+ L + T T+ + E+ +R + + K+ G+NHDP L P Sbjct: 640 NSDEISLKEWHTSLRTAHKVSQELLQRMGRKAI----KIYGVNHDPMLSESERP 689
>PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein 1/2 precursor| (PRP-1/PRP-2) (Parotid proline-rich protein 1/2) (Pr1/Pr2) (Protein C) (Parotid acidic protein) (Pa) (Parotid isoelectric focusing variant protein) (PIF-S) (Parotid double-band Length = 166 Score = 28.1 bits (61), Expect = 9.2 Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Frame = -3 Query: 389 PRAAGHAGVDLG-PKGPGGVQAVQRPAGGDREQG----GGHEP*PGAQEPQRPG*VSLHA 225 P+ GH G P+GP RP G R QG GGH+ P P +P Sbjct: 95 PQQGGHPPPPQGRPQGPPQQGGHPRPPRG-RPQGPPQQGGHQQGPPPPPPGKP-----QG 148 Query: 224 ALPQHLRPQG 195 PQ RPQG Sbjct: 149 PPPQGGRPQG 158
>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 28.1 bits (61), Expect = 9.2 Identities = 22/63 (34%), Positives = 24/63 (38%) Frame = -3 Query: 356 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG*VSLHAALPQHLRPQGRRCRAY 177 GP GP G + PAG G PG PQ P + LP PQG R Sbjct: 1081 GPPGPAGSPGERGPAG-----SAGPIGIPGRPGPQGPPGPAGEKGLPGEKGPQGPAGRDG 1135 Query: 176 RQG 168 QG Sbjct: 1136 LQG 1138
>ZIC2_MOUSE (Q62520) Zinc finger protein ZIC 2 (Zinc finger protein of the| cerebellum 2) Length = 530 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/48 (35%), Positives = 18/48 (37%) Frame = -3 Query: 428 AGGAVEALLRRAVPRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGG 285 A A A A +A H G G G GG A GG GGG Sbjct: 457 AAAAAAAAAAAAAAVSAVHRGAGSGSSGSGGGSAAGSGGGGGGAGGGG 504
>YETS2_HUMAN (Q9ULM3) YEATS domain-containing protein 2| Length = 1422 Score = 28.1 bits (61), Expect = 9.2 Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 3/66 (4%) Frame = -3 Query: 383 AAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG*VSLHAALPQHL- 207 +A G G G GG GG GGG G Q PG +S H ++ Sbjct: 795 SAASGGSGAGGGGGGGGGGGSGSGGGGSTGGGGGTAGGGTQSTAGPGGISQHLTYTSYIL 854 Query: 206 --RPQG 195 PQG Sbjct: 855 KQTPQG 860
>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54 precursor| Length = 1901 Score = 28.1 bits (61), Expect = 9.2 Identities = 18/47 (38%), Positives = 19/47 (40%) Frame = -3 Query: 428 AGGAVEALLRRAVPRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGG 288 AGGA L AAG G GP GP G+ P G GG Sbjct: 128 AGGAGGLLFGNGGAGAAGAPGQAGGPGGPAGLWGNGGPGGAGGSGGG 174
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 28.1 bits (61), Expect = 9.2 Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 10/62 (16%) Frame = -3 Query: 398 RAVPRAAGHAGVD--LGPKGPGGVQAVQRPAGGDREQGGGHEP----*PGAQ----EPQR 249 R P + G G D GPKGP G + PAG G P PGA+ P Sbjct: 487 RGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGS 546 Query: 248 PG 243 PG Sbjct: 547 PG 548 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -3 Query: 389 PRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*P 270 P + G G G GP GVQ PAG + ++G EP P Sbjct: 439 PGSKGDTGAK-GEPGPVGVQGPPGPAGEEGKRGARGEPGP 477
>SM50_STRPU (P11994) 50 kDa spicule matrix protein precursor| Length = 445 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -3 Query: 389 PRAAGHAGVDLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRP 246 P G GV G GG Q P G++ GG +P G Q+P P Sbjct: 371 PGMGGQPGVGGRQPGMGGRQ----PGFGNQPGVGGRQPGMGGQQPNNP 414
>RHLE_ECOLI (P25888) Putative ATP-dependent RNA helicase rhlE (EC 3.6.1.-)| Length = 454 Score = 28.1 bits (61), Expect = 9.2 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = -3 Query: 416 VEALLRRAVPRAAGHAGVDLGP--KGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQR 249 +E LL++ +PR A G + P K Q+ GG R QGGG G Q+P+R Sbjct: 360 IEKLLKKEIPRIA-IPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGR----GQQQPRR 412 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,405,355 Number of Sequences: 219361 Number of extensions: 1126307 Number of successful extensions: 4864 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 3700 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4687 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
