Clone Name | rbastl01h01 |
---|---|
Clone Library Name | barley_pub |
>emb|AL360236.26| Human DNA sequence from clone RP11-380M3 on chromosome 6 Contains a novel pseudogene, part of the KCNQ5 gene for potassium voltage-gated channel KQT-like subfamily member 5, and a phosphoglycerate mutase 1 (brain) (PGAM1) pseudogene, complete sequence Length = 154998 Score = 42.1 bits (21), Expect = 0.91 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gggcatccaattctccaccgc 113 ||||||||||||||||||||| Sbjct: 40090 gggcatccaattctccaccgc 40070
>gb|AC137558.3| Mus musculus BAC clone RP23-16I17 from chromosome 6, complete sequence Length = 225612 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gccaaatgcagccacagaca 131 |||||||||||||||||||| Sbjct: 118669 gccaaatgcagccacagaca 118688
>emb|AL354661.14| Human DNA sequence from clone RP11-386D8 on chromosome 9 Contains the gene for a novel olfactory (seven transmembrane helix) receptor and the 3' end of the gene for a novel protein (including KIAA0368), complete sequence Length = 138069 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 atgcagccacagacacagat 136 |||||||||||||||||||| Sbjct: 70954 atgcagccacagacacagat 70973
>dbj|AK124590.1| Homo sapiens cDNA FLJ42599 fis, clone BRACE3010416 Length = 4178 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 atgcagccacagacacagat 136 |||||||||||||||||||| Sbjct: 3654 atgcagccacagacacagat 3635
>dbj|BS000197.1| Pan troglodytes chromosome 22 clone:PTB-108M20, map 22, complete sequences Length = 192863 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gagtcccaactaaatttaca 73 |||||||||||||||||||| Sbjct: 27701 gagtcccaactaaatttaca 27682
>emb|AL096870.5|CNS00YVI Human chromosome 14 DNA sequence BAC R-934B9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196533 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 atgaaaatgcccaccttttc 38 |||||||||||||||||||| Sbjct: 24579 atgaaaatgcccaccttttc 24598
>gb|AF052139.1|AF052139 Homo sapiens clone 23744 mRNA sequence Length = 1227 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 atgcagccacagacacagat 136 |||||||||||||||||||| Sbjct: 692 atgcagccacagacacagat 673
>gb|AC165222.4| Cavia porcellus, clone Cavia porcellus-25196157D3, complete sequence Length = 43983 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ccagttctgttcaactatcc 182 |||||||||||||||||||| Sbjct: 8494 ccagttctgttcaactatcc 8513
>dbj|AB002366.1| Human mRNA for KIAA0368 gene, partial cds Length = 5665 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 atgcagccacagacacagat 136 |||||||||||||||||||| Sbjct: 5147 atgcagccacagacacagat 5128
>dbj|AP001010.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-701H16, complete sequence Length = 173709 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 ccacagacacagatcctgga 142 |||||||||||||||||||| Sbjct: 79035 ccacagacacagatcctgga 79054 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,191,365 Number of Sequences: 3902068 Number of extensions: 2191365 Number of successful extensions: 36799 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 36789 Number of HSP's gapped (non-prelim): 10 length of query: 277 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 255 effective length of database: 17,147,199,772 effective search space: 4372535941860 effective search space used: 4372535941860 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)