Clone Name | rbastl01g11 |
---|---|
Clone Library Name | barley_pub |
>emb|BX015230.1|CNS08JWY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA22DF03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 272 Score = 42.1 bits (21), Expect = 0.51 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 tccaaaactattacatatcta 102 ||||||||||||||||||||| Sbjct: 149 tccaaaactattacatatcta 129
>emb|BX000434.11| Zebrafish DNA sequence from clone CH211-2E18, complete sequence Length = 179109 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 aaaatccaaaactattacat 97 |||||||||||||||||||| Sbjct: 60800 aaaatccaaaactattacat 60819
>gb|AC149044.1| Pan troglodytes chromosome X clone PTB-089E19 map human ortholog q27.1, complete sequence Length = 193569 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 78 aaaatccaaaactattaca 96 ||||||||||||||||||| Sbjct: 132563 aaaatccaaaactattaca 132545
>ref|XM_380957.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG00781.1) partial mRNA Length = 1014 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 119 cgatcaggttggtgttgtc 137 ||||||||||||||||||| Sbjct: 85 cgatcaggttggtgttgtc 67
>emb|CR318599.18| Zebrafish DNA sequence from clone DKEY-28D5 in linkage group 22, complete sequence Length = 222575 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 78 aaaatccaaaactattaca 96 ||||||||||||||||||| Sbjct: 150760 aaaatccaaaactattaca 150742
>gb|AC107670.10| Mus musculus chromosome 14, clone RP23-54K15, complete sequence Length = 202048 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 caaaactattacatatcta 102 ||||||||||||||||||| Sbjct: 12658 caaaactattacatatcta 12676
>emb|AL157398.6| Human DNA sequence from clone RP11-56H7 on chromosome 10 Contains the NEBL gene for the nebulette protein (actin-binding Z-disc protein), a pseudogene similar to part of MTCO3 (COIII)(cytochrome c oxidase III) and a pseudogene similar to part of MTND1 (NADH dehydrogenase 1), complete sequence Length = 172616 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 agaaaatccaaaactatta 94 ||||||||||||||||||| Sbjct: 85288 agaaaatccaaaactatta 85306
>emb|AL137016.11| Human DNA sequence from clone RP4-595A18 on chromosome Xq26.3-27.2, complete sequence Length = 117847 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 78 aaaatccaaaactattaca 96 ||||||||||||||||||| Sbjct: 64670 aaaatccaaaactattaca 64652
>emb|CR318610.8| Zebrafish DNA sequence from clone CH211-14B14 in linkage group 5, complete sequence Length = 164564 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 78 aaaatccaaaactattaca 96 ||||||||||||||||||| Sbjct: 90818 aaaatccaaaactattaca 90800
>gb|AC092807.2| Homo sapiens chromosome 1 clone RP11-290M5, complete sequence Length = 180574 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 aatccaaaactattacata 98 ||||||||||||||||||| Sbjct: 162760 aatccaaaactattacata 162742
>emb|BX537152.15| Zebrafish DNA sequence from clone DKEY-61N7 in linkage group 14, complete sequence Length = 243729 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 aaaatccaaaactattaca 96 ||||||||||||||||||| Sbjct: 12087 aaaatccaaaactattaca 12105
>gb|AC158399.2| Mus musculus BAC clone RP23-246A2 from chromosome 14, complete sequence Length = 198948 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 caaaactattacatatcta 102 ||||||||||||||||||| Sbjct: 193799 caaaactattacatatcta 193817
>gb|AC159896.3| Mus musculus BAC clone RP23-265F16 from chromosome 9, complete sequence Length = 198120 Score = 38.2 bits (19), Expect = 8.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 71 ccaccagaaaatccaaaac 89 ||||||||||||||||||| Sbjct: 93324 ccaccagaaaatccaaaac 93342 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,089,096 Number of Sequences: 3902068 Number of extensions: 1089096 Number of successful extensions: 71503 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71481 Number of HSP's gapped (non-prelim): 22 length of query: 165 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 143 effective length of database: 17,147,199,772 effective search space: 2452049567396 effective search space used: 2452049567396 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)