>TRPB_PSESY (P34817) Tryptophan synthase beta chain (EC 4.2.1.20)|
          Length = 408

 Score = 34.3 bits (77), Expect = 0.074
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
 Frame = -1

Query: 368 TDRAGRRGDNKSARRHGEVPAVGGAHDLRHGQGRAALRPEDH-----VAAQGDRSKHVVR 204
           TD       +K  R  G +PA+  AH L     RA   P+DH     ++ +GD+    V 
Sbjct: 338 TDDEALDAFHKCCRLEGIIPALESAHALAEVFKRAPTLPKDHLMVVNLSGRGDKDMQTVM 397

Query: 203 HTFKTNRYVLH 171
           H  +T +   H
Sbjct: 398 HHMETTKQEKH 408

>FUSB_BURCE (P24127) Fusaric acid resistance protein fusB|
          Length = 142

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = -3

Query: 321 WRSPCSGRCA*PTPRA 274
           WRSPC  RCA P PRA
Sbjct: 110 WRSPCGSRCAPPAPRA 125

>FANCA_HUMAN (O15360) Fanconi anemia group A protein (Protein FACA)|
          Length = 1455

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = +1

Query: 187  FVLNVCLTTCLLRSPWAATWSSGRKAALPCPWRRSCAPP 303
            F+L  C T C L    A  W    +  L C WRR C  P
Sbjct: 1154 FILAKCQTKCPLILTSALVWWPSLEPVLLCRWRRHCQSP 1192

>SYN_CLOPE (P58693) Asparaginyl-tRNA synthetase (EC 6.1.1.22)|
           (Asparagine--tRNA ligase) (AsnRS)
          Length = 465

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 29/120 (24%), Positives = 44/120 (36%), Gaps = 8/120 (6%)
 Frame = +2

Query: 26  SFYNKCCPSKRKNERPKNTYMILQLHNAFAFFSINKNHVLIP-RAEIQSSVIRNGLS*MY 202
           S Y        K  +       L+  NAF F  +N        +    S+ I N      
Sbjct: 9   SLYRNTSEYSDKKVKISGWIRTLRASNAFGFIEVNDGSFFKNVQVVFDSAKISNYKEISK 68

Query: 203 VSLHACFDLLGPPRGLLDAKQPF-------LARGVGHAHLPLQGLRHAFERSYCLRVVPH 361
           + + +   ++G      D+KQPF       +  G+  +  PLQ  RH FE    LR + H
Sbjct: 69  LPISSSISVIGTLVETPDSKQPFEIQAEEIIVEGMSDSDYPLQKKRHTFE---YLRTIAH 125

>YIAO_ECOLI (P37676) 2,3-diketo-L-gulonate-binding periplasmic protein yiaO|
           precursor (2,3-DKG-binding protein) (Extracytoplasmic
           solute receptor protein yiaO)
          Length = 328

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 21/53 (39%), Positives = 24/53 (45%)
 Frame = +2

Query: 155 AEIQSSVIRNGLS*MYVSLHACFDLLGPPRGLLDAKQPFLARGVGHAHLPLQG 313
           A+   S +R G   M +S    F  L P   LLD   PFL R   HAH  L G
Sbjct: 72  AQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLLDV--PFLFRDTAHAHKTLDG 122

>SH22A_MOUSE (Q9QXK9) SH2 domain protein 2A (Lck-associated adapter protein)|
           (Lad) (Rlk/Itk-binding protein) (Ribp)
          Length = 374

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +3

Query: 198 CMSHYMLASISLGRHVVFWTQSSPSLPVA*VMRTSHCRDFAMPSSALIVSASSRTISFPS 377
           C  H++LA +  GRHVV    S+ +     +   + C     P   ++    +R  + P+
Sbjct: 158 CCRHFLLAQLGDGRHVVLGEDSAHAQLQDLLEHYTECP--LSPYGEILTQPLARQTAEPA 215

Query: 378 GLNIR 392
           GL++R
Sbjct: 216 GLSLR 220

>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250 kDa)|
            (AKAP 250) (Myasthenia gravis autoantigen gravin)
          Length = 1781

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = -1

Query: 392  PDIEARRETDRAGRRGDNKSARRHGEVPAVGGAHDLRHGQGRA-ALRPEDHVAAQG 228
            PDIE +    +   +   +  +   ++P  GG  D+     RA A RPE+   A G
Sbjct: 1029 PDIEEQERRTQEVLQAVAEKVKEESQLPGTGGPEDVLQPVQRAEAERPEEQAEASG 1084

>PROB_GEOSL (Q747Q3) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 373

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 385 LRPEGKLIVRDDAETIRALEG 323
           LRP GK+IV D A T+ A +G
Sbjct: 278 LRPSGKIIVDDGARTVLARQG 298

>TRPB_PSEAE (P07345) Tryptophan synthase beta chain (EC 4.2.1.20)|
          Length = 402

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
 Frame = -1

Query: 386 IEARRETDRAGRRGDNKSARRHGEVPAVGGAHDLRHGQGRAALRPEDHV-----AAQGDR 222
           +E    TD       +   R  G +PA+  +H L     RA   P++H+     + +GD+
Sbjct: 328 VEYTSITDDEALEAFHTCCRLEGIIPALESSHALAEVFKRAPSLPKEHIMVVNLSGRGDK 387

Query: 221 SKHVVRH 201
               V H
Sbjct: 388 DMQTVMH 394

>K1C15_PROAT (Q5K2P2) Keratin, type I cytoskeletal 15 (Cytokeratin-15) (CK-15)|
           (Keratin-15) (K15) (Fragment)
          Length = 441

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +3

Query: 261 SSPSLPVA*VMRTSHCRDFAMPSSALIVSASSRTISFPSG 380
           SSPS+P A V   S     A+PSS+   ++ S + SF SG
Sbjct: 43  SSPSVPSAIVSSYSSTLSSALPSSSYGGNSFSSSTSFSSG 82

>OTC_METKA (Q8TWG4) Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase)|
          Length = 312

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 362 RAGRRGDNKSARRHGEVPAVGGAHDLRH 279
           RA R  D +   R+ EVP + G  DL H
Sbjct: 110 RARRHEDIEEFARYSEVPVINGLSDLEH 137

>TAMO_DROME (Q9W1A4) Protein tamozhennic|
          Length = 797

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
 Frame = -1

Query: 356 GRRGDNKSARRHGEVP--AVGGAHDLRHGQGRAALRPEDHVAAQGDRSKHVVRHTFKTNR 183
           G+ G   S   H   P  +   A  L   Q R +  P DH     D   H+ +H F T+ 
Sbjct: 390 GKTGPAHSCDLHRRQPNTSAAAAAALAAMQHRQSTYPPDHHLIDFDERAHLTQHDFGTHD 449

Query: 182 Y 180
           Y
Sbjct: 450 Y 450

>K1C13_PROAT (Q5K2P4) Keratin, type I cytoskeletal 13 (Cytokeratin-13) (CK-13)|
           (Keratin-13) (K13)
          Length = 465

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +3

Query: 261 SSPSLPVA*VMRTSHCRDFAMPSSALIVSASSRTISFPSG 380
           SSPS+P A V   S     A+PSS+   ++ S + SF SG
Sbjct: 51  SSPSVPSAIVSSYSSTLSSALPSSSYGGNSFSSSTSFSSG 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,065,308
Number of Sequences: 219361
Number of extensions: 1094303
Number of successful extensions: 2809
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2809
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)