>TBG_SCHPO (P25295) Tubulin gamma chain (Gamma tubulin)|
          Length = 446

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +3

Query: 84  SCVFLFKNTAMQYTRPKKKNILFL*QYKKRAL 179
           S   LFK T  QY R +K+N  FL QYKK A+
Sbjct: 383 SIASLFKRTLDQYDRLRKRN-AFLEQYKKEAI 413

>SUMF1_MOUSE (Q8R0F3) Sulfatase-modifying factor 1 precursor|
           (C-alpha-formyglycine-generating enzyme 1)
          Length = 372

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -3

Query: 377 EHANGSAGL*TRGICGCWTSCEANSDGGKIAVNHLSRAASQPRL 246
           E   G+A L   G CGC T   A + G   A    SR A+ P L
Sbjct: 36  EAREGAASL--AGSCGCGTPQRAGAHGSSAAAQRYSREANAPGL 77

>BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain 2A (Transcription|
            termination factor I-interacting protein 5)
            (TTF-I-interacting protein 5) (Tip5)
          Length = 1850

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +1

Query: 295  PPSEFASQEVQHPHIPLV*SPALPLACSGTW 387
            PPS+F  Q  QH    L   P  P  CSG W
Sbjct: 1357 PPSKFFKQVEQHYLTQLTAQPIPPEMCSGWW 1387

>TBG_EMENI (P18695) Tubulin gamma chain (Gamma tubulin)|
          Length = 454

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +3

Query: 84  SCVFLFKNTAMQYTRPKKKNILFL*QYKKRA 176
           S   LFK    QY R +K+N  FL QYKK A
Sbjct: 382 SVATLFKRIVQQYDRLRKRN-AFLEQYKKEA 411

>PDE1_CAEEL (O18696) Probable 3',5'-cyclic phosphodiesterase pde-1 (EC|
           3.1.4.17)
          Length = 664

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = +1

Query: 283 TAIFPPSEFASQEVQHPHIPLV*SPALPLACSGTWTASPKGLKYVQNGHAVK 438
           T IF    F  Q+V    IP   +  +   C  TW+ SP  L  V  GHA+K
Sbjct: 242 TGIFFEKLFRKQQVVQCPIPPEIAELMKEVC--TWSFSPFQLNEVSEGHALK 291

>VIT1_PERAM (Q9U8M0) Vitellogenin 1 precursor (Vg-1)|
          Length = 1896

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 306  ICFAGSPAPAYSPGLEPSAAVGMFRDLDCFTKGP 407
            ICF+  P P  +P  +P+  +       C TKGP
Sbjct: 1826 ICFSMRPLPECAPRFKPADTLKKKIKFHCLTKGP 1859

>GTRA_SHIFL (P37785) Bactoprenol-linked glucose translocase|
          Length = 124

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 16/95 (16%)
 Frame = +1

Query: 31  SIHRGICVLCYKNVAY-----NIPVFFYSKTLP------CSILDQKKRT----YCFFSSI 165
           ++H G+   CY N+A+     NI  F  + T        CS      +     + FF   
Sbjct: 24  ALHWGVFYACYNNLAFGQGRSNIVGFICAATFSFFANARCSFKVSATKARYFIFIFFMGA 83

Query: 166 RSVLFTILFELNYFTNLTGKLVTSLFK-SLGWLAA 267
            S LF +LF+L   + +      SLF   LG+ A+
Sbjct: 84  MSYLFGVLFDLLALSPIFTLFTFSLFSLVLGYCAS 118


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,461,041
Number of Sequences: 219361
Number of extensions: 1391681
Number of successful extensions: 3630
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3630
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)