>gb|AC158922.8| Mus musculus chromosome 15, clone RP23-182C12, complete sequence
          Length = 201723

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 270    cctgaatttatttccccagtg 290
              |||||||||||||||||||||
Sbjct: 174829 cctgaatttatttccccagtg 174809

>gb|AC016670.7| Homo sapiens BAC clone RP11-11K6 from 2, complete sequence
          Length = 148415

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 79    ttttctagctaattgagcaag 99
             |||||||||||||||||||||
Sbjct: 98643 ttttctagctaattgagcaag 98663

>gb|AC114560.8| Mus musculus chromosome 15, clone RP23-54K6, complete sequence
          Length = 151670

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 270   cctgaatttatttccccagtg 290
             |||||||||||||||||||||
Sbjct: 78829 cctgaatttatttccccagtg 78809

>emb|BX537769.1|HSM805855 Homo sapiens mRNA; cDNA DKFZp781B1340 (from clone DKFZp781B1340);
           complete cds
          Length = 2900

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 79  ttttctagctaattgagcaag 99
           |||||||||||||||||||||
Sbjct: 131 ttttctagctaattgagcaag 151

>emb|AL954769.9| Zebrafish DNA sequence from clone CH211-262A21 in linkage group 7,
             complete sequence
          Length = 145555

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   acacactgacacactccccac 138
             |||||||||||||||||||||
Sbjct: 97897 acacactgacacactccccac 97877

>ref|NM_106522.1| Arabidopsis thaliana unknown protein AT1G78750 mRNA, complete cds
          Length = 1377

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 tttattcagatcatttggat 263
           ||||||||||||||||||||
Sbjct: 888 tttattcagatcatttggat 869

>gb|AC149720.2| Bos taurus BAC CH240-248M14 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 180339

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     taaacaacagtaacgtcatt 51
              ||||||||||||||||||||
Sbjct: 150474 taaacaacagtaacgtcatt 150455

>gb|AC118000.14| Mus musculus chromosome 3, clone RP23-33M9, complete sequence
          Length = 167218

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    tttattcagatcatttggat 263
              ||||||||||||||||||||
Sbjct: 121983 tttattcagatcatttggat 122002

>gb|AC122421.4| Mus musculus BAC clone RP24-169J24 from chromosome 6, complete sequence
          Length = 154134

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     gaaaatagctttattgattt 28
             ||||||||||||||||||||
Sbjct: 55238 gaaaatagctttattgattt 55257

>emb|BX936461.17| Zebrafish DNA sequence from clone CH211-14A11 in linkage group 20,
             complete sequence
          Length = 103791

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   cattcaaatacacctaaaat 223
             ||||||||||||||||||||
Sbjct: 53991 cattcaaatacacctaaaat 54010

>gb|AF265664.1| Solanum tuberosum resistance gene cluster, complete sequence
          Length = 187352

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 12     aatagctttattgatttgattaaa 35
              |||||||||||||||||| |||||
Sbjct: 146406 aatagctttattgatttggttaaa 146429



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 12    aatagctttattgatttgattaaa 35
             |||| |||||||||||||||||||
Sbjct: 67716 aatatctttattgatttgattaaa 67739

>gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-85d15, complete sequence
          Length = 127331

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     aaaatagctttattgatttg 29
              ||||||||||||||||||||
Sbjct: 111618 aaaatagctttattgatttg 111637

>gb|AF195939.1|AF195939 Solanum tuberosum disease resistance protein Gpa2 gene, complete cds
          Length = 10331

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 12   aatagctttattgatttgattaaa 35
            |||||||||||||||||| |||||
Sbjct: 9976 aatagctttattgatttggttaaa 9953

>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete sequence
          Length = 90425

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   tttattcagatcatttggat 263
             ||||||||||||||||||||
Sbjct: 64081 tttattcagatcatttggat 64062


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,807,294
Number of Sequences: 3902068
Number of extensions: 3807294
Number of successful extensions: 73714
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73687
Number of HSP's gapped (non-prelim): 27
length of query: 438
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 416
effective length of database: 17,147,199,772
effective search space: 7133235105152
effective search space used: 7133235105152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)