Clone Name | rbastl01e08 |
---|---|
Clone Library Name | barley_pub |
>Y2F9_ENCCU (Q8STG8) Hypothetical protein ECU02_1590/ECU04_0060/ECU08_2120| Length = 207 Score = 30.8 bits (68), Expect = 1.3 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = +3 Query: 156 PTLQAAKQSTKHTHTHTPNWKS*TPHHESSLDMYNTATNSFTPQTLDSGL 305 P + K T+ HTH N + T H E+ T+T TP T+ S L Sbjct: 67 PPKKKKKNHTEGCHTHEANPEPNTKHTETESPKPQTSTQHHTPITIPSSL 116
>Y105_ENCCU (Q8STH9) Hypothetical protein ECU01_0050/ECU01_1560/ECU07_0010| Length = 238 Score = 30.8 bits (68), Expect = 1.3 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = +3 Query: 156 PTLQAAKQSTKHTHTHTPNWKS*TPHHESSLDMYNTATNSFTPQTLDSGL 305 P + K T+ HTH N + T H E+ T+T TP T+ S L Sbjct: 98 PPKKKKKNHTEGCHTHEANPEPNTKHTETESPKPQTSTQHHTPITIPSSL 147
>LYG2_HUMAN (Q86SG7) Lysozyme g-like protein 2 precursor| Length = 212 Score = 30.4 bits (67), Expect = 1.7 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = +2 Query: 245 LGYVQHSNKFFHSTNPRFRPRLAPACLDDQMLMRSGGGD-DSELVCCC 385 +G + S F HS P PRL C D M M++ G D+ V C Sbjct: 14 IGTSRGSYPFSHSMKPHLHPRLYHGCYGDIMTMKTSGATCDANSVMNC 61
>ADD4_STRCO (Q9L0L6) Probable adenosine deaminase 4 (EC 3.5.4.4) (Adenosine| aminohydrolase 4) Length = 343 Score = 28.9 bits (63), Expect = 4.9 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +1 Query: 160 RYKQQSKVPNTHTHTHQTGSLRHPTT 237 R + S++P H H H TGS+R PTT Sbjct: 3 RVRDVSELPKAHLHLHFTGSMR-PTT 27
>FMT_ENTFA (Q82ZD8) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 313 Score = 28.1 bits (61), Expect = 8.3 Identities = 13/50 (26%), Positives = 24/50 (48%) Frame = +1 Query: 139 YTTIEALRYKQQSKVPNTHTHTHQTGSLRHPTTKAAWICTTQQQILSLHK 288 +TT + +K + P T T T G++ + KA WI + +L + + Sbjct: 235 FTTYQGTNWKIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDR 284
>DDB2_HUMAN (Q92466) DNA damage-binding protein 2 (Damage-specific DNA-binding| protein 2) (DDB p48 subunit) (DDBb) (UV-damaged DNA-binding protein 2) (UV-DDB 2) Length = 427 Score = 28.1 bits (61), Expect = 8.3 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 20/73 (27%) Frame = +3 Query: 207 PNWKS*TPHHESSLDMYN------------------TATNSFTP--QTLDSGLGLHPHVW 326 PN+KS TP+ ++D+++ ++ N F P TL S +G H +W Sbjct: 359 PNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIW 418 Query: 327 MIRC**DQEEATT 365 QEEA T Sbjct: 419 ------SQEEART 425 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,026,611 Number of Sequences: 219361 Number of extensions: 989615 Number of successful extensions: 2449 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2281 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2437 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)