>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 53      caatcccttgaattttcataacaatt 78
               ||||||||||| ||||||||||||||
Sbjct: 1542983 caatcccttgatttttcataacaatt 1542958

>emb|BX323067.11| Zebrafish DNA sequence from clone CH211-277B21 in linkage group 24,
              complete sequence
          Length = 152092

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 247    aaagttcttgtaaaaataaaaa 268
              ||||||||||||||||||||||
Sbjct: 146605 aaagttcttgtaaaaataaaaa 146626

>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 54      aatcccttgaattttcataacaatt 78
               |||||||||| ||||||||||||||
Sbjct: 1579314 aatcccttgatttttcataacaatt 1579290

>emb|Z92849.1|CEH12D21 Caenorhabditis elegans Fosmid H12D21, complete sequence
          Length = 35017

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                              
Query: 251   ttcttgtaaaaataaaaa-gctcttttgagagt 282
             ||||| |||||||||||| ||||||||||||||
Sbjct: 29221 ttcttctaaaaataaaaatgctcttttgagagt 29189

>emb|AL445438.27| Human DNA sequence from clone RP11-427B20 on chromosome 1 Contains
            two CpG islands, complete sequence
          Length = 108271

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 58   ccttgaattttcataacaatt 78
            |||||||||||||||||||||
Sbjct: 2232 ccttgaattttcataacaatt 2212

>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 54      aatcccttgaattttcataacaatt 78
               |||||||||| ||||||||||||||
Sbjct: 1540830 aatcccttgatttttcataacaatt 1540806

>emb|BX571970.20| Zebrafish DNA sequence from clone DKEY-276G11 in linkage group 7,
              complete sequence
          Length = 170614

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 155    cagcttgaatgtaagaaaaac 175
              |||||||||||||||||||||
Sbjct: 133365 cagcttgaatgtaagaaaaac 133385

>gb|AC099707.14| Mus musculus chromosome 1, clone RP23-329C7, complete sequence
          Length = 204557

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    tcccttgaattttcataaca 75
             ||||||||||||||||||||
Sbjct: 97492 tcccttgaattttcataaca 97511

>gb|AC004122.1| Arabidopsis thaliana chromosome I BAC T27I1 genomic sequence, complete
             sequence
          Length = 67878

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 150   attgacagcttgaatgtaagaaaa 173
             ||||||||||| ||||||||||||
Sbjct: 22607 attgacagcttcaatgtaagaaaa 22630

>emb|AL355602.11| Human DNA sequence from clone RP5-1166F10 on chromosome 1 Contains the
             3' end of a novel gene (FLJ36179), complete sequence
          Length = 99163

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    atgtcattactttgcaatga 115
             ||||||||||||||||||||
Sbjct: 28476 atgtcattactttgcaatga 28457

>gb|AC112215.3| Homo sapiens chromosome 3 clone RP11-844E22, complete sequence
          Length = 199310

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   gctcttttgagagtctgcct 288
             ||||||||||||||||||||
Sbjct: 29282 gctcttttgagagtctgcct 29301

>gb|AC105934.3| Homo sapiens chromosome 3 clone RP11-620K19, complete sequence
          Length = 217029

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   gctcttttgagagtctgcct 288
             ||||||||||||||||||||
Sbjct: 20918 gctcttttgagagtctgcct 20937

>gb|AC093009.5| Homo sapiens 3 BAC RP11-548O23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 89214

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 159   ttgaatgtaagaaaaacacctcca 182
             ||||| ||||||||||||||||||
Sbjct: 26506 ttgaaagtaagaaaaacacctcca 26483

>gb|AC013452.9| Homo sapiens chromosome 15 clone RP11-325E5 map 15q21.1, complete
             sequence
          Length = 204745

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   gtctgcctgaaatggtcagt 300
             ||||||||||||||||||||
Sbjct: 85486 gtctgcctgaaatggtcagt 85467

>gb|AC106721.4| Homo sapiens 3 BAC RP11-49H3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 106246

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 159   ttgaatgtaagaaaaacacctcca 182
             ||||| ||||||||||||||||||
Sbjct: 51046 ttgaaagtaagaaaaacacctcca 51069

>emb|BX511060.7| Zebrafish DNA sequence from clone CH211-210L19 in linkage group 10,
             complete sequence
          Length = 139250

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   gtaaaaataaaaagctcttt 275
             ||||||||||||||||||||
Sbjct: 65853 gtaaaaataaaaagctcttt 65834

>gb|AC007175.1|AC007175 Drosophila melanogaster, chromosome 2R, region 57D3-57E2, BAC clones
              DS01261 and BACR48K03, complete sequence
          Length = 188633

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     attttcataacaattgcaaa 83
              ||||||||||||||||||||
Sbjct: 103624 attttcataacaattgcaaa 103605

>gb|AC008197.3|AC008197 Drosophila melanogaster, chromosome 3R, region 94B-94C, BAC clone
              BACR02L12, complete sequence
          Length = 178931

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    aacacctccactgtacataa 192
              ||||||||||||||||||||
Sbjct: 101700 aacacctccactgtacataa 101681

>gb|AC009846.9|AC009846 Drosophila melanogaster, chromosome 3R, region 94C-94D, BAC clone
             BACR23F10, complete sequence
          Length = 164038

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   aacacctccactgtacataa 192
             ||||||||||||||||||||
Sbjct: 23763 aacacctccactgtacataa 23744

>gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, complete sequence
          Length = 196848

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 252    tcttgtaaaaataaaaagctcttt 275
              ||||||||||||||||||| ||||
Sbjct: 158142 tcttgtaaaaataaaaagcacttt 158165

>emb|Y09539.1|LJRINGFIN L.japonicus gene encoding RING finger protein
          Length = 9454

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 160  tgaatgtaagaaaaacacctccac 183
            ||||||||||||||||||| ||||
Sbjct: 1524 tgaatgtaagaaaaacaccaccac 1547

>emb|BX248090.11| Zebrafish DNA sequence from clone DKEY-156K12 in linkage group 20,
              complete sequence
          Length = 212314

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    gattgacagcttgaatgtaa 168
              ||||||||||||||||||||
Sbjct: 167731 gattgacagcttgaatgtaa 167750

>emb|BX323818.8| Zebrafish DNA sequence from clone DKEY-48H7 in linkage group 4, complete
              sequence
          Length = 196712

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     ttttcataacaattgcaaac 84
              ||||||||||||||||||||
Sbjct: 148452 ttttcataacaattgcaaac 148471

>gb|AE003740.3| Drosophila melanogaster chromosome 3R, section 78 of 118 of the
             complete sequence
          Length = 234378

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   aacacctccactgtacataa 192
             ||||||||||||||||||||
Sbjct: 10414 aacacctccactgtacataa 10395

>gb|AE003453.3| Drosophila melanogaster chromosome 2R, section 61 of 73 of the complete
              sequence
          Length = 305143

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     attttcataacaattgcaaa 83
              ||||||||||||||||||||
Sbjct: 272021 attttcataacaattgcaaa 272002

>gb|AC006208.3| Homo sapiens 3 PAC RP4-793P23 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 123943

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   gctcttttgagagtctgcct 288
             ||||||||||||||||||||
Sbjct: 87799 gctcttttgagagtctgcct 87818


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,345,375
Number of Sequences: 3902068
Number of extensions: 4345375
Number of successful extensions: 76297
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 76168
Number of HSP's gapped (non-prelim): 129
length of query: 390
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 368
effective length of database: 17,147,199,772
effective search space: 6310169516096
effective search space used: 6310169516096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)