ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl01d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187982.1| Oryza sativa (japonica cultivar-group), Ozsa840... 168 9e-39
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 129 8e-27
3dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic D... 129 8e-27
4gb|BT018055.1| Zea mays clone EL01N0532B09.c mRNA sequence 117 3e-23
5gb|AY109997.1| Zea mays CL12599_1 mRNA sequence 94 4e-16
6emb|BX000704.26| Zebrafish DNA sequence from clone CH211-201B9 i... 46 0.091
7emb|AL391153.3|CNS06C7Z Human chromosome 14 DNA sequence BAC C-2... 46 0.091
8emb|AL121831.19|HSJ850N15 Human DNA sequence from clone RP5-850N... 44 0.36
9gb|AC096630.16| Pan troglodytes clone rp43-71g16, complete sequence 44 0.36
10emb|Z49908.1|CEC07E3 Caenorhabditis elegans Cosmid C07E3, comple... 42 1.4
11emb|BX324218.7| Zebrafish DNA sequence from clone CH211-236L6 in... 42 1.4
12ref|XM_527616.1| PREDICTED: Pan troglodytes similar to CD2-assoc... 40 5.6
13gb|AC134245.2| Mus musculus BAC clone RP23-144I22 from chromosom... 40 5.6
14ref|XM_717804.1| Candida albicans SC5314 hypothetical protein (C... 40 5.6
15ref|XM_717659.1| Candida albicans SC5314 hypothetical protein (C... 40 5.6
16gb|AC146408.3| Pan troglodytes BAC clone RP43-41L7 from 7, compl... 40 5.6
17gb|BC068787.1| Xenopus laevis hypothetical protein LOC398496, mR... 40 5.6
18gb|AC022062.10| Mus musculus chromosome 5, clone RP23-57P23, com... 40 5.6
19gb|AC148932.3| Pan troglodytes BAC clone CH251-571G8 from chromo... 40 5.6
20gb|BC046728.1| Xenopus laevis hypothetical protein LOC398496, mR... 40 5.6
21emb|Z68315.1|CEF28C6 Caenorhabditis elegans Cosmid F28C6, comple... 40 5.6
22gb|AC110382.3| Mus musculus BAC clone RP24-555I16 from chromosom... 40 5.6
23gb|AC124480.5| Mus musculus BAC clone RP24-117B21 from chromosom... 40 5.6
24gb|AC154906.3| Mus musculus BAC clone RP23-344H23 from chromosom... 40 5.6
25gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 5.6
26emb|AL138799.9| Human DNA sequence from clone RP5-837I24 on chro... 40 5.6
27emb|BX571658.1| Wolinella succinogenes, complete genome; segment... 40 5.6
28emb|AJ002933.1|WSAJ2933 Wolinella succinogenes aspA, dcuA genes ... 40 5.6
29emb|AL592464.24| Human DNA sequence from clone RP11-740P5 on chr... 40 5.6
30emb|AL928552.7| Mouse DNA sequence from clone RP23-30I12 on chro... 40 5.6
31emb|CR859070.1| Pongo pygmaeus mRNA; cDNA DKFZp469E061 (from clo... 40 5.6
32gb|AC148829.3| Pan troglodytes BAC clone CH251-483L24 from chrom... 40 5.6
33gb|AC069547.7| Homo sapiens chromosome 10 clone RP11-521C22, com... 40 5.6
34gb|AC007802.7|AC007802 Drosophila melanogaster, chromosome 2R, r... 40 5.6
35dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
36gb|AC020709.4|AC020709 Homo sapiens clone RP11-425F18, complete ... 40 5.6
37gb|AC018648.5|AC018648 Homo sapiens chromosome 7 clone RP11-265E... 40 5.6
38gb|AC023347.8| Homo sapiens BAC clone RP11-507H23 from 2, comple... 40 5.6
39gb|AF164377.1|AF164377 Homo sapiens CD2AP homolog mRNA, complete... 40 5.6
40dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
41emb|BX649234.1| Mouse DNA sequence from clone RP24-281J6 on chro... 40 5.6
42emb|X89215.1|WSDCUANSA W.succinogenes dcuA and ansA genes 40 5.6
43emb|X83689.1|WSANSAGEN W.succinogenes ansA gene 40 5.6
44gb|BC069444.1| Homo sapiens CD2-associated protein, mRNA (cDNA c... 40 5.6
45gb|AF146277.1|AF146277 Homo sapiens adapter protein CMS mRNA, co... 40 5.6
46gb|AE003455.3| Drosophila melanogaster chromosome 2R, section 63... 40 5.6
47emb|BX005191.10| Mouse DNA sequence from clone RP23-433C8 on chr... 40 5.6
48gb|AC004711.1|AC004711 Homo sapiens clone g1564a136 from 7p14-15... 40 5.6
49gb|AC004366.1|AC004366 Drosophila melanogaster (P1 DS07550 (D60)... 40 5.6
50emb|CR956361.4| Pig DNA sequence from clone CH242-247A17 on chro... 40 5.6
51ref|NM_012120.1| Homo sapiens CD2-associated protein (CD2AP), mRNA 40 5.6 
>ref|NM_187982.1| Oryza sativa (japonica cultivar-group), Ozsa8402 predicted mRNA
          Length = 846

 Score =  168 bits (85), Expect = 9e-39
 Identities = 162/187 (86%), Gaps = 3/187 (1%)
 Strand = Plus / Minus

                                                                       
Query: 237 tcaggcgtcataggaagaacatccaatgtgataggcttcctgatgatctgagccaatgct 296
           |||||| ||||||||||||||||||||||||||||| |||||| ||||||| ||||  ||
Sbjct: 846 tcaggcatcataggaagaacatccaatgtgataggcatcctgaggatctgaaccaacact 787

                                                                       
Query: 297 tgagatctggtg---gtaggggcggtgaaccgggggtagaagcaaagccaaagacttgtc 353
            ||  |||| ||   ||| ||||| || || ||||||| ||||| |||||||||||||||
Sbjct: 786 agaagtctgatgatggtatgggcgctggacagggggtaaaagcagagccaaagacttgtc 727

                                                                       
Query: 354 catgagcagaagccgtcggcatttactgcaaagttttgtaaatagagtctgataatcggc 413
           ||| ||||||||||||| |||||||||||||| |||||||||||||||||||||   |||
Sbjct: 726 catcagcagaagccgtccgcatttactgcaaacttttgtaaatagagtctgatagctggc 667

                  
Query: 414 aatccaa 420
           |||||||
Sbjct: 666 aatccaa 660
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  129 bits (65), Expect = 8e-27
 Identities = 130/151 (86%), Gaps = 3/151 (1%)
 Strand = Plus / Minus

                                                                           
Query: 236     gtcaggcgtcataggaagaacatccaatgtgataggcttcctgatgatctgagccaatgc 295
               ||||||| ||||||||||||||||||||||||||||| |||||| ||||||| ||||  |
Sbjct: 8928356 gtcaggcatcataggaagaacatccaatgtgataggcatcctgaggatctgaaccaacac 8928297

                                                                           
Query: 296     ttgagatctggtg---gtaggggcggtgaaccgggggtagaagcaaagccaaagacttgt 352
               | ||  |||| ||   ||| ||||| || || ||||||| ||||| ||||||||||||||
Sbjct: 8928296 tagaagtctgatgatggtatgggcgctggacagggggtaaaagcagagccaaagacttgt 8928237

                                              
Query: 353     ccatgagcagaagccgtcggcatttactgca 383
               |||| ||||||||||||| ||||||||||||
Sbjct: 8928236 ccatcagcagaagccgtccgcatttactgca 8928206



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                         
Query: 379     ctgcaaagttttgtaaatagagtctgataatcggcaatccaa 420
               ||||||| |||||||||||||||||||||   ||||||||||
Sbjct: 8928110 ctgcaaacttttgtaaatagagtctgatagctggcaatccaa 8928069
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>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0453A06
          Length = 154378

 Score =  129 bits (65), Expect = 8e-27
 Identities = 130/151 (86%), Gaps = 3/151 (1%)
 Strand = Plus / Minus

                                                                         
Query: 236   gtcaggcgtcataggaagaacatccaatgtgataggcttcctgatgatctgagccaatgc 295
             ||||||| ||||||||||||||||||||||||||||| |||||| ||||||| ||||  |
Sbjct: 36111 gtcaggcatcataggaagaacatccaatgtgataggcatcctgaggatctgaaccaacac 36052

                                                                         
Query: 296   ttgagatctggtg---gtaggggcggtgaaccgggggtagaagcaaagccaaagacttgt 352
             | ||  |||| ||   ||| ||||| || || ||||||| ||||| ||||||||||||||
Sbjct: 36051 tagaagtctgatgatggtatgggcgctggacagggggtaaaagcagagccaaagacttgt 35992

                                            
Query: 353   ccatgagcagaagccgtcggcatttactgca 383
             |||| ||||||||||||| ||||||||||||
Sbjct: 35991 ccatcagcagaagccgtccgcatttactgca 35961



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                       
Query: 379   ctgcaaagttttgtaaatagagtctgataatcggcaatccaa 420
             ||||||| |||||||||||||||||||||   ||||||||||
Sbjct: 35865 ctgcaaacttttgtaaatagagtctgatagctggcaatccaa 35824
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>gb|BT018055.1| Zea mays clone EL01N0532B09.c mRNA sequence
          Length = 1489

 Score =  117 bits (59), Expect = 3e-23
 Identities = 149/179 (83%)
 Strand = Plus / Minus

                                                                        
Query: 242  cgtcataggaagaacatccaatgtgataggcttcctgatgatctgagccaatgcttgaga 301
            |||| ||||| |||||||||||||| ||||| || ||| ||||||  |||||  ||||  
Sbjct: 1258 cgtcgtaggaggaacatccaatgtggtaggcctcttgaagatctggtccaatatttgaag 1199

                                                                        
Query: 302  tctggtggtaggggcggtgaaccgggggtagaagcaaagccaaagacttgtccatgagca 361
            ||||||| ||||||||||| || || || |  ||||||||||||||||||||||| | ||
Sbjct: 1198 tctggtgataggggcggtggacaggaggcaacagcaaagccaaagacttgtccatcatca 1139

                                                                       
Query: 362  gaagccgtcggcatttactgcaaagttttgtaaatagagtctgataatcggcaatccaa 420
            ||||||||| |||||| |||||||  || ||||| |||||||||||   ||||||||||
Sbjct: 1138 gaagccgtccgcatttgctgcaaaccttcgtaaacagagtctgatagctggcaatccaa 1080
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>gb|AY109997.1| Zea mays CL12599_1 mRNA sequence
          Length = 718

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 146/179 (81%)
 Strand = Plus / Plus

                                                                       
Query: 242 cgtcataggaagaacatccaatgtgataggcttcctgatgatctgagccaatgcttgaga 301
           |||| ||||| |||||||||||||| ||||| || ||| ||||||  |   |  ||||  
Sbjct: 274 cgtcgtaggaggaacatccaatgtggtaggcctcttgaagatctggtctcgtatttgaag 333

                                                                       
Query: 302 tctggtggtaggggcggtgaaccgggggtagaagcaaagccaaagacttgtccatgagca 361
           ||||||| ||||||||||| || || || |  ||||||||||||||||||||||| | ||
Sbjct: 334 tctggtgataggggcggtggacaggaggcaacagcaaagccaaagacttgtccatcatca 393

                                                                      
Query: 362 gaagccgtcggcatttactgcaaagttttgtaaatagagtctgataatcggcaatccaa 420
           ||||||||| |||||| |||||||  || ||||| |||||||||||   ||||||||||
Sbjct: 394 gaagccgtccgcatttgctgcaaaccttcgtaaacagagtctgatagctggcaatccaa 452
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>emb|BX000704.26| Zebrafish DNA sequence from clone CH211-201B9 in linkage group 3,
              complete sequence
          Length = 191916

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 382    caaagttttgtaaatagagtctgataa 408
              ||||||||| |||||||||||||||||
Sbjct: 183499 caaagttttttaaatagagtctgataa 183473
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>emb|AL391153.3|CNS06C7Z Human chromosome 14 DNA sequence BAC C-2576L4 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 172336

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 75     gaggtgaaaatgcaaacagagca 97
              |||||||||||||||||||||||
Sbjct: 110401 gaggtgaaaatgcaaacagagca 110379
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>emb|AL121831.19|HSJ850N15 Human DNA sequence from clone RP5-850N15 on chromosome 20 Contains the
             CSTP1 gene for cystatin pseudogene 1, complete sequence
          Length = 39017

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 200   tagaaacatcctagctacaggt 221
             ||||||||||||||||||||||
Sbjct: 35795 tagaaacatcctagctacaggt 35816
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>gb|AC096630.16| Pan troglodytes clone rp43-71g16, complete sequence
          Length = 160603

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 200   tagaaacatcctagctacaggt 221
             ||||||||||||||||||||||
Sbjct: 22067 tagaaacatcctagctacaggt 22088
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>emb|Z49908.1|CEC07E3 Caenorhabditis elegans Cosmid C07E3, complete sequence
          Length = 43815

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     aattatcaaaatttgcaacat 27
             |||||||||||||||||||||
Sbjct: 33559 aattatcaaaatttgcaacat 33579
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>emb|BX324218.7| Zebrafish DNA sequence from clone CH211-236L6 in linkage group 2,
             complete sequence
          Length = 153650

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 188   cacaaatacagttagaaacat 208
             |||||||||||||||||||||
Sbjct: 45424 cacaaatacagttagaaacat 45404
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>ref|XM_527616.1| PREDICTED: Pan troglodytes similar to CD2-associated protein
           (LOC472241), mRNA
          Length = 651

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 11  atcaaaatttgcaacatctgtttc 34
           |||||||||| |||||||||||||
Sbjct: 267 atcaaaatttacaacatctgtttc 244
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>gb|AC134245.2| Mus musculus BAC clone RP23-144I22 from chromosome 12, complete
             sequence
          Length = 213349

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 44    tgctcatgagatacacaggtttta 67
             ||||||||| ||||||||||||||
Sbjct: 18457 tgctcatgaaatacacaggtttta 18434
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>ref|XM_717804.1| Candida albicans SC5314 hypothetical protein (CaO19_12152), mRNA
          Length = 5541

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    aattatcaaaatttgcaaca 26
            ||||||||||||||||||||
Sbjct: 2914 aattatcaaaatttgcaaca 2933
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>ref|XM_717659.1| Candida albicans SC5314 hypothetical protein (CaO19_4683), mRNA
          Length = 5499

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    aattatcaaaatttgcaaca 26
            ||||||||||||||||||||
Sbjct: 2872 aattatcaaaatttgcaaca 2891
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>gb|AC146408.3| Pan troglodytes BAC clone RP43-41L7 from 7, complete sequence
          Length = 198021

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 27     tctgtttcaacaatttctgctcat 50
              ||||||||| ||||||||||||||
Sbjct: 115688 tctgtttcatcaatttctgctcat 115711
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>gb|BC068787.1| Xenopus laevis hypothetical protein LOC398496, mRNA (cDNA clone
            MGC:81334 IMAGE:6633086), complete cds
          Length = 3000

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 273  ttcctgatgatctgagccaatgcttgag 300
            ||||| ||||||||| ||||||||||||
Sbjct: 1095 ttcctcatgatctgaaccaatgcttgag 1068
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>gb|AC022062.10| Mus musculus chromosome 5, clone RP23-57P23, complete sequence
          Length = 235363

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   agaagcaaagccaaagactt 350
             ||||||||||||||||||||
Sbjct: 33403 agaagcaaagccaaagactt 33384
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>gb|AC148932.3| Pan troglodytes BAC clone CH251-571G8 from chromosome 7, complete
             sequence
          Length = 232604

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 27    tctgtttcaacaatttctgctcat 50
             ||||||||| ||||||||||||||
Sbjct: 49982 tctgtttcatcaatttctgctcat 50005
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>gb|BC046728.1| Xenopus laevis hypothetical protein LOC398496, mRNA (cDNA clone
            IMAGE:5537233), partial cds
          Length = 2934

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 273  ttcctgatgatctgagccaatgcttgag 300
            ||||| ||||||||| ||||||||||||
Sbjct: 1050 ttcctcatgatctgaaccaatgcttgag 1023
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>emb|Z68315.1|CEF28C6 Caenorhabditis elegans Cosmid F28C6, complete sequence
          Length = 24032

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    attaagaattatcaaaattt 20
            ||||||||||||||||||||
Sbjct: 8409 attaagaattatcaaaattt 8428
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>gb|AC110382.3| Mus musculus BAC clone RP24-555I16 from chromosome 12, complete sequence
          Length = 170164

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 44     tgctcatgagatacacaggtttta 67
              ||||||||| ||||||||||||||
Sbjct: 115593 tgctcatgaaatacacaggtttta 115616
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>gb|AC124480.5| Mus musculus BAC clone RP24-117B21 from chromosome 5, complete sequence
          Length = 189616

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    agaagcaaagccaaagactt 350
              ||||||||||||||||||||
Sbjct: 168905 agaagcaaagccaaagactt 168886
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>gb|AC154906.3| Mus musculus BAC clone RP23-344H23 from chromosome 12, complete
             sequence
          Length = 205985

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 44    tgctcatgagatacacaggtttta 67
             ||||||||| ||||||||||||||
Sbjct: 44469 tgctcatgaaatacacaggtttta 44492
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 272     cttcctgatgatctgagcca 291
               ||||||||||||||||||||
Sbjct: 2554288 cttcctgatgatctgagcca 2554307
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>emb|AL138799.9| Human DNA sequence from clone RP5-837I24 on chromosome 1p31.1-31.3
             Contains a dead ringer (Drosophila)-like 2 (bright and
             dead ringer) (DRIL2) pseudogene, two novel genes, a novel
             pseudogene, part of the LPHN2 gene for latrophilin 2, the
             3' end of a novel gene and a ribosomal protein S20 (RPS20)
             pseudogene, complete sequence
          Length = 119561

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     attaagaattatcaaaattt 20
             ||||||||||||||||||||
Sbjct: 85904 attaagaattatcaaaattt 85885
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>emb|BX571658.1| Wolinella succinogenes, complete genome; segment 2/7
          Length = 346792

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 286    gagccaatgcttgagatctg 305
              ||||||||||||||||||||
Sbjct: 294945 gagccaatgcttgagatctg 294964
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>emb|AJ002933.1|WSAJ2933 Wolinella succinogenes aspA, dcuA genes and partial ansA gene
          Length = 3606

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  gagccaatgcttgagatctg 305
            ||||||||||||||||||||
Sbjct: 3428 gagccaatgcttgagatctg 3409
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>emb|AL592464.24| Human DNA sequence from clone RP11-740P5 on chromosome 1, complete
             sequence
          Length = 120028

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   attttccctgtcctgtccta 169
             ||||||||||||||||||||
Sbjct: 91312 attttccctgtcctgtccta 91293
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>emb|AL928552.7| Mouse DNA sequence from clone RP23-30I12 on chromosome 4, complete
              sequence
          Length = 206507

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     tgaaaatgcaaacagagcaa 98
              ||||||||||||||||||||
Sbjct: 200194 tgaaaatgcaaacagagcaa 200213
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>emb|CR859070.1| Pongo pygmaeus mRNA; cDNA DKFZp469E061 (from clone DKFZp469E061)
          Length = 4521

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 11   atcaaaatttgcaacatctgtttc 34
            |||||||||| |||||||||||||
Sbjct: 1521 atcaaaatttacaacatctgtttc 1498
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>gb|AC148829.3| Pan troglodytes BAC clone CH251-483L24 from chromosome 7, complete
             sequence
          Length = 153598

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    tctgtttcaacaatttctgctcat 50
             ||||||||| ||||||||||||||
Sbjct: 54319 tctgtttcatcaatttctgctcat 54296
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>gb|AC069547.7| Homo sapiens chromosome 10 clone RP11-521C22, complete sequence
          Length = 189144

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 7     aattatcaaaatttgcaacatctgtttc 34
             ||||||||| ||||||||||| ||||||
Sbjct: 39983 aattatcaagatttgcaacatttgtttc 39956
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>gb|AC007802.7|AC007802 Drosophila melanogaster, chromosome 2R, region 58A1-58A2, BAC clone
              BACR07I11, complete sequence
          Length = 155553

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     acatctgtttcaacaatttc 43
              ||||||||||||||||||||
Sbjct: 109129 acatctgtttcaacaatttc 109110
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 18      tttgcaacatctgtttcaacaatt 41
               |||||||||||| |||||||||||
Sbjct: 3251058 tttgcaacatctttttcaacaatt 3251081
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>gb|AC020709.4|AC020709 Homo sapiens clone RP11-425F18, complete sequence
          Length = 184104

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   attttccctgtcctgtccta 169
             ||||||||||||||||||||
Sbjct: 81515 attttccctgtcctgtccta 81496
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>gb|AC018648.5|AC018648 Homo sapiens chromosome 7 clone RP11-265E18, complete sequence
          Length = 155953

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    tctgtttcaacaatttctgctcat 50
             ||||||||| ||||||||||||||
Sbjct: 55741 tctgtttcatcaatttctgctcat 55718
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>gb|AC023347.8| Homo sapiens BAC clone RP11-507H23 from 2, complete sequence
          Length = 174655

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    tagaagcaaagccaaagact 349
              ||||||||||||||||||||
Sbjct: 146496 tagaagcaaagccaaagact 146515
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>gb|AF164377.1|AF164377 Homo sapiens CD2AP homolog mRNA, complete cds
          Length = 1920

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 11   atcaaaatttgcaacatctgtttc 34
            |||||||||| |||||||||||||
Sbjct: 1434 atcaaaatttacaacatctgtttc 1411
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>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0015I14
          Length = 150650

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 18    tttgcaacatctgtttcaacaatt 41
             |||||||||||| |||||||||||
Sbjct: 38421 tttgcaacatctttttcaacaatt 38444
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>emb|BX649234.1| Mouse DNA sequence from clone RP24-281J6 on chromosome X, complete
             sequence
          Length = 95091

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    tgcaacatctgtttcaacaa 39
             ||||||||||||||||||||
Sbjct: 85878 tgcaacatctgtttcaacaa 85859
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>emb|X89215.1|WSDCUANSA W.succinogenes dcuA and ansA genes
          Length = 2505

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  gagccaatgcttgagatctg 305
            ||||||||||||||||||||
Sbjct: 1367 gagccaatgcttgagatctg 1348
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>emb|X83689.1|WSANSAGEN W.succinogenes ansA gene
          Length = 1035

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 286 gagccaatgcttgagatctg 305
           ||||||||||||||||||||
Sbjct: 198 gagccaatgcttgagatctg 179
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>gb|BC069444.1| Homo sapiens CD2-associated protein, mRNA (cDNA clone MGC:97150
            IMAGE:7262392), complete cds
          Length = 2014

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 11   atcaaaatttgcaacatctgtttc 34
            |||||||||| |||||||||||||
Sbjct: 1480 atcaaaatttacaacatctgtttc 1457
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>gb|AF146277.1|AF146277 Homo sapiens adapter protein CMS mRNA, complete cds
          Length = 4658

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 11   atcaaaatttgcaacatctgtttc 34
            |||||||||| |||||||||||||
Sbjct: 1484 atcaaaatttacaacatctgtttc 1461
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>gb|AE003455.3| Drosophila melanogaster chromosome 2R, section 63 of 73 of the complete
              sequence
          Length = 291250

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     acatctgtttcaacaatttc 43
              ||||||||||||||||||||
Sbjct: 162779 acatctgtttcaacaatttc 162760
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>emb|BX005191.10| Mouse DNA sequence from clone RP23-433C8 on chromosome X, complete
              sequence
          Length = 134264

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    tagaagcaaagccaaagact 349
              ||||||||||||||||||||
Sbjct: 111558 tagaagcaaagccaaagact 111539
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>gb|AC004711.1|AC004711 Homo sapiens clone g1564a136 from 7p14-15, complete sequence
          Length = 41581

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 27    tctgtttcaacaatttctgctcat 50
             ||||||||| ||||||||||||||
Sbjct: 29987 tctgtttcatcaatttctgctcat 30010
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>gb|AC004366.1|AC004366 Drosophila melanogaster (P1 DS07550 (D60)) DNA sequence, complete
             sequence
          Length = 86884

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    acatctgtttcaacaatttc 43
             ||||||||||||||||||||
Sbjct: 28112 acatctgtttcaacaatttc 28093
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>emb|CR956361.4| Pig DNA sequence from clone CH242-247A17 on chromosome 17, complete
             sequence
          Length = 122522

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   tctgagccaatgcttgagat 302
             ||||||||||||||||||||
Sbjct: 28010 tctgagccaatgcttgagat 28029
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>ref|NM_012120.1| Homo sapiens CD2-associated protein (CD2AP), mRNA
          Length = 4658

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 11   atcaaaatttgcaacatctgtttc 34
            |||||||||| |||||||||||||
Sbjct: 1484 atcaaaatttacaacatctgtttc 1461


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,774,501
Number of Sequences: 3902068
Number of extensions: 3774501
Number of successful extensions: 79021
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78868
Number of HSP's gapped (non-prelim): 153
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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