>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  111 bits (56), Expect = 2e-21
 Identities = 104/120 (86%)
 Strand = Plus / Minus

                                                                           
Query: 326     gcttcaccaaacccgtaggagctgaagtgcttcactctgaacttccactcgcccttggcg 385
               ||||||||||| || ||||||||||| ||||| || ||||| ||||||||||||||||| 
Sbjct: 3343074 gcttcaccaaagccataggagctgaaatgcttgaccctgaatttccactcgcccttggca 3343015

                                                                           
Query: 386     ccatcaaacgagataaactccactccctgttcctcagccttcttcaccagcatctccttg 445
                |||| || ||||| |||||  | ||||| |||||||||||||||||||| |||||||||
Sbjct: 3343014 gcatcgaatgagatgaactcagcaccctgctcctcagccttcttcaccagtatctccttg 3342955



 Score =  103 bits (52), Expect = 5e-19
 Identities = 103/120 (85%)
 Strand = Plus / Minus

                                                                           
Query: 326     gcttcaccaaacccgtaggagctgaagtgcttcactctgaacttccactcgcccttggcg 385
               ||||||||||| || ||||||||||| ||||| || ||||| ||||||||||| ||| ||
Sbjct: 3351809 gcttcaccaaagccataggagctgaaatgcttgaccctgaatttccactcgccattgacg 3351750

                                                                           
Query: 386     ccatcaaacgagataaactccactccctgttcctcagccttcttcaccagcatctccttg 445
                |||| || ||||| |||||  | ||||| |||||||| |||||||||||||||||||||
Sbjct: 3351749 gcatcgaaagagatgaactcagcaccctgctcctcagctttcttcaccagcatctccttg 3351690

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  111 bits (56), Expect = 2e-21
 Identities = 104/120 (86%)
 Strand = Plus / Minus

                                                                           
Query: 326     gcttcaccaaacccgtaggagctgaagtgcttcactctgaacttccactcgcccttggcg 385
               ||||||||||| || ||||||||||| ||||| || ||||| ||||||||||||||||| 
Sbjct: 3343019 gcttcaccaaagccataggagctgaaatgcttgaccctgaatttccactcgcccttggca 3342960

                                                                           
Query: 386     ccatcaaacgagataaactccactccctgttcctcagccttcttcaccagcatctccttg 445
                |||| || ||||| |||||  | ||||| |||||||||||||||||||| |||||||||
Sbjct: 3342959 gcatcgaatgagatgaactcagcaccctgctcctcagccttcttcaccagtatctccttg 3342900



 Score =  103 bits (52), Expect = 5e-19
 Identities = 103/120 (85%)
 Strand = Plus / Minus

                                                                           
Query: 326     gcttcaccaaacccgtaggagctgaagtgcttcactctgaacttccactcgcccttggcg 385
               ||||||||||| || ||||||||||| ||||| || ||||| ||||||||||| ||| ||
Sbjct: 3351754 gcttcaccaaagccataggagctgaaatgcttgaccctgaatttccactcgccattgacg 3351695

                                                                           
Query: 386     ccatcaaacgagataaactccactccctgttcctcagccttcttcaccagcatctccttg 445
                |||| || ||||| |||||  | ||||| |||||||| |||||||||||||||||||||
Sbjct: 3351694 gcatcgaaagagatgaactcagcaccctgctcctcagctttcttcaccagcatctccttg 3351635

>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137936

 Score =  111 bits (56), Expect = 2e-21
 Identities = 104/120 (86%)
 Strand = Plus / Minus

                                                                         
Query: 326   gcttcaccaaacccgtaggagctgaagtgcttcactctgaacttccactcgcccttggcg 385
             ||||||||||| || ||||||||||| ||||| || ||||| ||||||||||||||||| 
Sbjct: 22127 gcttcaccaaagccataggagctgaaatgcttgaccctgaatttccactcgcccttggca 22068

                                                                         
Query: 386   ccatcaaacgagataaactccactccctgttcctcagccttcttcaccagcatctccttg 445
              |||| || ||||| |||||  | ||||| |||||||||||||||||||| |||||||||
Sbjct: 22067 gcatcgaatgagatgaactcagcaccctgctcctcagccttcttcaccagtatctccttg 22008



 Score =  103 bits (52), Expect = 5e-19
 Identities = 103/120 (85%)
 Strand = Plus / Minus

                                                                         
Query: 326   gcttcaccaaacccgtaggagctgaagtgcttcactctgaacttccactcgcccttggcg 385
             ||||||||||| || ||||||||||| ||||| || ||||| ||||||||||| ||| ||
Sbjct: 30862 gcttcaccaaagccataggagctgaaatgcttgaccctgaatttccactcgccattgacg 30803

                                                                         
Query: 386   ccatcaaacgagataaactccactccctgttcctcagccttcttcaccagcatctccttg 445
              |||| || ||||| |||||  | ||||| |||||||| |||||||||||||||||||||
Sbjct: 30802 gcatcgaaagagatgaactcagcaccctgctcctcagctttcttcaccagcatctccttg 30743

>gb|BT018481.1| Zea mays clone EL01N0424C07.d mRNA sequence
          Length = 1900

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                        
Query: 341  taggagctgaagtgcttcactctgaacttccactcgcccttggcgccatcaaacgagata 400
            |||| |||||| |||||||| |||||||||||||| ||||||||  ||||||| || | |
Sbjct: 1730 taggcgctgaaatgcttcaccctgaacttccactctcccttggcagcatcaaaggacaca 1671

                                                      
Query: 401  aactccactccctgttcctcagccttcttcaccagcatctcc 442
            |||||| | ||||| ||||| |||||||||| ||||||||||
Sbjct: 1670 aactccgcgccctgctcctccgccttcttcatcagcatctcc 1629

>gb|BT018715.1| Zea mays clone EL01N0517E03.d mRNA sequence
          Length = 1871

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 99/116 (85%), Gaps = 1/116 (0%)
 Strand = Plus / Minus

                                                                        
Query: 328  ttcaccaaa-cccgtaggagctgaagtgcttcactctgaacttccactcgcccttggcgc 386
            ||||||||| |||||||| ||||||||||||||| |||||||||||||| |||||| |  
Sbjct: 1579 ttcaccaaagcccgtaggcgctgaagtgcttcaccctgaacttccactctcccttgacag 1520

                                                                    
Query: 387  catcaaacgagataaactccactccctgttcctcagccttcttcaccagcatctcc 442
            | || || || | ||||||  | ||||| ||||| |||||||||||||||||||||
Sbjct: 1519 cgtcgaaggacacaaactctgcgccctgctcctccgccttcttcaccagcatctcc 1464

>gb|AY110896.1| Zea mays CL23032_-2 mRNA sequence
          Length = 625

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 341 taggagctgaagtgcttcactctgaacttccactcgcccttggcgccatcaaa 393
           |||| ||||||||||||||| |||||||||||||| ||||||||  |||||||
Sbjct: 184 taggcgctgaagtgcttcaccctgaacttccactctcccttggcagcatcaaa 236

>gb|AY389582.1| Hyacinthus orientalis nucleoporin mRNA, partial cds
          Length = 732

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 345 agctgaagtgcttcactctgaacttccactc 375
           |||||||||||||||| ||||||||||||||
Sbjct: 418 agctgaagtgcttcaccctgaacttccactc 388

>gb|AC095044.3| Homo sapiens BAC clone RP11-132B16 from 7, complete sequence
          Length = 134184

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 411  cctgttcctcagccttcttcac 432
            ||||||||||||||||||||||
Sbjct: 5906 cctgttcctcagccttcttcac 5885

>gb|AC142295.1| Pan troglodytes BAC clone RP43-80F20 from 7, complete sequence
          Length = 165071

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 411    cctgttcctcagccttcttcac 432
              ||||||||||||||||||||||
Sbjct: 140564 cctgttcctcagccttcttcac 140543

>ref|XM_639988.1| Dictyostelium discoideum hypothetical protein (DDB0168011), partial
           mRNA
          Length = 4611

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 253 atcatccaaaagaggcagcaattacaaca 281
           ||||||||||||| |||| ||||||||||
Sbjct: 494 atcatccaaaagatgcagaaattacaaca 522

>ref|XM_639242.1| Dictyostelium discoideum hypothetical protein (DDB0217388), partial
           mRNA
          Length = 4611

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 253 atcatccaaaagaggcagcaattacaaca 281
           ||||||||||||| |||| ||||||||||
Sbjct: 494 atcatccaaaagatgcagaaattacaaca 522

>emb|AL669823.7| Mouse DNA sequence from clone RP23-456O1 on chromosome 11 Contains a
             novel gene and the 5' end of a novel gene, complete
             sequence
          Length = 197012

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 85    ggtgccagaatgtaacttttgtgca 109
             |||||||||||||| ||||||||||
Sbjct: 18507 ggtgccagaatgtatcttttgtgca 18483

>gb|AC096588.1| Homo sapiens BAC clone RP11-725D20 from 4, complete sequence
          Length = 150864

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 133   acagaaaaacatgggaaggaactca 157
             ||||||||||||| |||||||||||
Sbjct: 93457 acagaaaaacatgagaaggaactca 93481

>emb|BX682233.6| Zebrafish DNA sequence from clone CH211-177P5 in linkage group 16,
             complete sequence
          Length = 145536

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 171   agaacaaaagcatcacaaccaatat 195
             ||||||||||||||||||| |||||
Sbjct: 40528 agaacaaaagcatcacaactaatat 40552

>gb|AC155231.2| Mus musculus BAC clone RP24-336I23 from chromosome 12, complete sequence
          Length = 175296

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 342    aggagctgaagtgcttcactctgaa 366
              |||||||| ||||||||||||||||
Sbjct: 135270 aggagctgtagtgcttcactctgaa 135294

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 11       gcagacggcgccaccaaaagg 31
                |||||||||||||||||||||
Sbjct: 20154611 gcagacggcgccaccaaaagg 20154631

>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4,
              complete sequence
          Length = 541399

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 253    atcatccaaaagaggcagcaattacaaca 281
              ||||||||||||| |||| ||||||||||
Sbjct: 178831 atcatccaaaagatgcagaaattacaaca 178803

>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1372_D12
          Length = 179898

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 11    gcagacggcgccaccaaaagg 31
             |||||||||||||||||||||
Sbjct: 56999 gcagacggcgccaccaaaagg 57019

>dbj|AP003930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1657_A07
          Length = 125217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 11     gcagacggcgccaccaaaagg 31
              |||||||||||||||||||||
Sbjct: 119214 gcagacggcgccaccaaaagg 119234

>emb|AL844887.10| Zebrafish DNA sequence from clone DKEY-66C10, complete sequence
          Length = 243870

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 171   agaacaaaagcatcacaaccaatat 195
             ||||||||||||||||||| |||||
Sbjct: 17970 agaacaaaagcatcacaactaatat 17994

>emb|CT009613.14| Mouse DNA sequence from clone RP23-55L9 on chromosome 12, complete
              sequence
          Length = 214861

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 342    aggagctgaagtgcttcactctgaa 366
              |||||||| ||||||||||||||||
Sbjct: 206265 aggagctgtagtgcttcactctgaa 206241

>emb|AJ535050.1|OSA535050 Oryza sativa (japonica cultivar-group) pdr5 gene for PDR-like ABC
            transporter, exons 1-19
          Length = 12922

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 11   gcagacggcgccaccaaaagg 31
            |||||||||||||||||||||
Sbjct: 2751 gcagacggcgccaccaaaagg 2771

>emb|AL954832.12| Zebrafish DNA sequence from clone DKEY-15O4, complete sequence
          Length = 256126

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 171    agaacaaaagcatcacaaccaatat 195
              ||||||||||||||||||| |||||
Sbjct: 208905 agaacaaaagcatcacaactaatat 208929

>emb|AL845490.8| Mouse DNA sequence from clone RP23-259M16 on chromosome 2, complete
             sequence
          Length = 200794

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 36    atttcattcaggacagtaaca 56
             |||||||||||||||||||||
Sbjct: 81009 atttcattcaggacagtaaca 80989

>gb|AC101722.14| Mus musculus chromosome 5, clone RP23-310L24, complete sequence
          Length = 172370

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 412    ctgttcctcagccttcttca 431
              ||||||||||||||||||||
Sbjct: 121775 ctgttcctcagccttcttca 121794

>gb|AC150424.3| Branchiostoma floridae clone CH302-7J16, complete sequence
          Length = 154657

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   aaaaagatatgtacagaaaa 140
             ||||||||||||||||||||
Sbjct: 28955 aaaaagatatgtacagaaaa 28936

>gb|AC163036.2| Mus musculus BAC clone RP23-219G12 from chromosome 17, complete sequence
          Length = 217187

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 130    tgtacagaaaaacatgggaaggaa 153
              ||||||||| ||||||||||||||
Sbjct: 120123 tgtacagaagaacatgggaaggaa 120100

>gb|BC073354.1| Xenopus laevis similar to Hermansky-Pudlak syndrome 3, mRNA (cDNA
            clone MGC:80771 IMAGE:5512777), complete cds
          Length = 3361

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 151  gaactcatagcagcattcagagaa 174
            ||||| ||||||||||||||||||
Sbjct: 1829 gaactaatagcagcattcagagaa 1852

>gb|BC041292.1| Xenopus laevis similar to Hermansky-Pudlak syndrome 3, mRNA (cDNA
           clone IMAGE:4682613), partial cds
          Length = 1593

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 151 gaactcatagcagcattcagagaa 174
           ||||| ||||||||||||||||||
Sbjct: 67  gaactaatagcagcattcagagaa 90

>gb|AC110034.8| Mus musculus chromosome 3, clone RP23-237L12, complete sequence
          Length = 188908

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 402    actccactccctgttcctcagccttcttcacc 433
              |||||| | |||| ||||||||||||||||||
Sbjct: 134888 actccagtacctgctcctcagccttcttcacc 134857

>gb|AC146683.11| Medicago truncatula clone mth2-179n10, complete sequence
          Length = 131133

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 117   atgaaaaaagatatgtacagaaaa 140
             ||||||||||||||||| ||||||
Sbjct: 74940 atgaaaaaagatatgtatagaaaa 74917

>gb|AC161535.5| Mus musculus chromosome 5, clone RP23-26J13, complete sequence
          Length = 209259

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 412    ctgttcctcagccttcttca 431
              ||||||||||||||||||||
Sbjct: 202087 ctgttcctcagccttcttca 202068

>gb|AC156552.10| Mus musculus chromosome 3, clone RP24-271K21, complete sequence
          Length = 168716

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 402    actccactccctgttcctcagccttcttcacc 433
              |||||| | |||| ||||||||||||||||||
Sbjct: 168205 actccagtacctgctcctcagccttcttcacc 168236

>gb|AY190950.1| Drosophila willistoni clone DWIF01_1_E5 (D1417) genomic sequence
          Length = 40487

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   cagcattcagagaacaaaag 180
             ||||||||||||||||||||
Sbjct: 11828 cagcattcagagaacaaaag 11809

>gb|AC002359.1|AC002359 Homo sapiens Xp22 Cosmid U239B3 (from Lawrence Livermore X library)
            complete sequence
          Length = 16699

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  tcagccaggtggtcggcttc 324
            ||||||||||||||||||||
Sbjct: 8656 tcagccaggtggtcggcttc 8675

>emb|AL805903.12| Mouse DNA sequence from clone RP23-464N23 on chromosome 4, complete
              sequence
          Length = 136895

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     aaaaggatgcatttcattca 45
              ||||||||||||||||||||
Sbjct: 112793 aaaaggatgcatttcattca 112774


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,455,969
Number of Sequences: 3902068
Number of extensions: 4455969
Number of successful extensions: 90171
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90024
Number of HSP's gapped (non-prelim): 147
length of query: 447
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 425
effective length of database: 17,147,199,772
effective search space: 7287559903100
effective search space used: 7287559903100
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)