ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl01d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MTAL1_KLULA (Q08398) Mating-type protein ALPHA1 (Transcription a... 30 3.1
2SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precur... 30 3.1
3CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3 29 4.0
4PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5) 28 6.9
5PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5) 28 6.9
6PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.... 28 6.9
7LGT_MANSM (Q65VJ7) Prolipoprotein diacylglyceryl transferase (EC... 28 6.9
8TILS_BUCBP (Q89AX3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR... 28 9.0
9ATKA_SALTI (Q8Z8E4) Potassium-transporting ATPase A chain (EC 3.... 28 9.0
10ATKA_SALPA (Q5PCJ8) Potassium-transporting ATPase A chain (EC 3.... 28 9.0

>MTAL1_KLULA (Q08398) Mating-type protein ALPHA1 (Transcription activator|
           Alpha1p) (MATalpha1 protein)
          Length = 261

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 258 LQTIINTHVTSQKYTAQNWLLLTSQFLC 341
           L TII+ H T  K T +NW L+  ++ C
Sbjct: 129 LSTIISKHWTVDKQTRKNWELIAQEYNC 156



to top

>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC|
           3.2.1.-) (Soluble cell wall protein 11)
          Length = 542

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +2

Query: 197 GSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIYSSKLAV 319
           GSS S AA+   PK++A  + P N+  SC  A   SS L +
Sbjct: 269 GSSSSSAAITSSPKAIA--YSPYNDDGSCKSADAVSSDLTL 307



to top

>CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3|
          Length = 1396

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 111  FLHNL*QCTVVLEYSVGYNISCQHCRSRKLN 19
            ++ NL  C   LEY  GY ++  H   RKLN
Sbjct: 1319 YMRNLSNCVPTLEYFTGYKMAELHILVRKLN 1349



to top

>PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5)|
          Length = 505

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = -2

Query: 320 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFSSSVK 156
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++ + ++
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYLNGIE 461



to top

>PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5)|
          Length = 505

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = -2

Query: 320 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFSSSVK 156
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++ + ++
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYLNGIE 461



to top

>PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5) (PCL1)|
          Length = 505

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = -2

Query: 320 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFSSSVK 156
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++ + ++
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYLNGIE 461



to top

>LGT_MANSM (Q65VJ7) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 268

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 14/55 (25%)
 Frame = -2

Query: 242 WILVSRRRRPNSCWSLGMNKAFFFSSSV--------------KWDVFVSPPMLLF 120
           W+ V R  RP+S W++       F+                 +WD+FV  P  LF
Sbjct: 39  WLAVKRANRPDSGWTVEQVDNLLFNGFAGVFLGGRIGYVLFYQWDLFVQEPSYLF 93



to top

>TILS_BUCBP (Q89AX3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 438

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 5   QNNLRFSFRLLQC*HDIL*PTEYSKTTVHCYKLCKN 112
           +NNL F+FR +   H +   +E  K + HC K+C N
Sbjct: 36  KNNLNFTFRAIHINHQLHPDSE--KWSDHCKKICIN 69



to top

>ATKA_SALTI (Q8Z8E4) Potassium-transporting ATPase A chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain) (ATP
           phosphohydrolase [potassium-transporting] A chain)
           (Potassium-binding and translocating subunit A)
          Length = 559

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 242 WILVSRRRRPNSCWSLGMNKAFFFSSSVKWDVF 144
           W+ ++ +R P   W L +N A  F ++  W  +
Sbjct: 86  WLPLNPQRLPGLSWDLALNTAVSFVTNTNWQAY 118



to top

>ATKA_SALPA (Q5PCJ8) Potassium-transporting ATPase A chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain) (ATP
           phosphohydrolase [potassium-transporting] A chain)
           (Potassium-binding and translocating subunit A)
          Length = 559

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 242 WILVSRRRRPNSCWSLGMNKAFFFSSSVKWDVF 144
           W+ ++ +R P   W L +N A  F ++  W  +
Sbjct: 86  WLPLNPQRLPGLSWDLALNTAVSFVTNTNWQAY 118


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,968,924
Number of Sequences: 219361
Number of extensions: 1238141
Number of successful extensions: 3697
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3697
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top