Clone Name | rbastl01d09 |
---|---|
Clone Library Name | barley_pub |
>MTAL1_KLULA (Q08398) Mating-type protein ALPHA1 (Transcription activator| Alpha1p) (MATalpha1 protein) Length = 261 Score = 29.6 bits (65), Expect = 3.1 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 Query: 258 LQTIINTHVTSQKYTAQNWLLLTSQFLC 341 L TII+ H T K T +NW L+ ++ C Sbjct: 129 LSTIISKHWTVDKQTRKNWELIAQEYNC 156
>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC| 3.2.1.-) (Soluble cell wall protein 11) Length = 542 Score = 29.6 bits (65), Expect = 3.1 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +2 Query: 197 GSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIYSSKLAV 319 GSS S AA+ PK++A + P N+ SC A SS L + Sbjct: 269 GSSSSSAAITSSPKAIA--YSPYNDDGSCKSADAVSSDLTL 307
>CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3| Length = 1396 Score = 29.3 bits (64), Expect = 4.0 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -1 Query: 111 FLHNL*QCTVVLEYSVGYNISCQHCRSRKLN 19 ++ NL C LEY GY ++ H RKLN Sbjct: 1319 YMRNLSNCVPTLEYFTGYKMAELHILVRKLN 1349
>PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5)| Length = 505 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/55 (21%), Positives = 28/55 (50%) Frame = -2 Query: 320 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFSSSVK 156 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++ + ++ Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYLNGIE 461
>PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5)| Length = 505 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/55 (21%), Positives = 28/55 (50%) Frame = -2 Query: 320 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFSSSVK 156 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++ + ++ Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYLNGIE 461
>PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5) (PCL1)| Length = 505 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/55 (21%), Positives = 28/55 (50%) Frame = -2 Query: 320 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFSSSVK 156 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++ + ++ Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYLNGIE 461
>LGT_MANSM (Q65VJ7) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 268 Score = 28.5 bits (62), Expect = 6.9 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 14/55 (25%) Frame = -2 Query: 242 WILVSRRRRPNSCWSLGMNKAFFFSSSV--------------KWDVFVSPPMLLF 120 W+ V R RP+S W++ F+ +WD+FV P LF Sbjct: 39 WLAVKRANRPDSGWTVEQVDNLLFNGFAGVFLGGRIGYVLFYQWDLFVQEPSYLF 93
>TILS_BUCBP (Q89AX3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 438 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 5 QNNLRFSFRLLQC*HDIL*PTEYSKTTVHCYKLCKN 112 +NNL F+FR + H + +E K + HC K+C N Sbjct: 36 KNNLNFTFRAIHINHQLHPDSE--KWSDHCKKICIN 69
>ATKA_SALTI (Q8Z8E4) Potassium-transporting ATPase A chain (EC 3.6.3.12)| (Potassium-translocating ATPase A chain) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) Length = 559 Score = 28.1 bits (61), Expect = 9.0 Identities = 9/33 (27%), Positives = 17/33 (51%) Frame = -2 Query: 242 WILVSRRRRPNSCWSLGMNKAFFFSSSVKWDVF 144 W+ ++ +R P W L +N A F ++ W + Sbjct: 86 WLPLNPQRLPGLSWDLALNTAVSFVTNTNWQAY 118
>ATKA_SALPA (Q5PCJ8) Potassium-transporting ATPase A chain (EC 3.6.3.12)| (Potassium-translocating ATPase A chain) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) Length = 559 Score = 28.1 bits (61), Expect = 9.0 Identities = 9/33 (27%), Positives = 17/33 (51%) Frame = -2 Query: 242 WILVSRRRRPNSCWSLGMNKAFFFSSSVKWDVF 144 W+ ++ +R P W L +N A F ++ W + Sbjct: 86 WLPLNPQRLPGLSWDLALNTAVSFVTNTNWQAY 118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,968,924 Number of Sequences: 219361 Number of extensions: 1238141 Number of successful extensions: 3697 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3628 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3697 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)