Clone Name | rbastl01d08 |
---|---|
Clone Library Name | barley_pub |
>DJLA_MANSM (Q65RA1) DnaJ-like protein djlA| Length = 288 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/50 (38%), Positives = 25/50 (50%) Frame = -1 Query: 242 QTANLQLNTVPRTPIKVEEEEEDLQNNLRSQVWSDGAARHCARLALQGGK 93 QT L + + +V EE+ L NNL SQ+ D A R A+ A GK Sbjct: 59 QTTFAVLGHLSKAKGRVTEEDIQLANNLMSQMQLDVANRQLAQNAFNRGK 108
>GH34_ORYSA (Q60EJ6) Probable indole-3-acetic acid-amido synthetase GH3.4 (EC| 6.3.2.-) (Auxin-responsive GH3-like protein 4) (OsGH3-4) Length = 629 Score = 28.5 bits (62), Expect = 4.2 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Frame = -3 Query: 270 ITVQHGAGAP--NGKPPTKYRPKNPHQSGRRRRRPTE*FEIAGVERRSGSPLC*TSITGR 97 + + +G +P +GKP +++ + G R+ PT E+ ERRSG + R Sbjct: 91 LRIANGDTSPILSGKPVSEFLTSSGTSGGERKLMPTIEEEM---ERRSGLYSLLMPVMSR 147 Query: 96 QVPGV 82 QVPG+ Sbjct: 148 QVPGL 152
>DUS4_MOUSE (Q8BFV3) Dual specificity protein phosphatase 4 (EC 3.1.3.48) (EC| 3.1.3.16) Length = 398 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -1 Query: 140 DGAARHCARLALQGGKCLV*NCRP 69 +G+ H A L GGKCL+ +CRP Sbjct: 33 NGSGSHGALGLLSGGKCLLLDCRP 56
>GPNMB_HUMAN (Q14956) Transmembrane glycoprotein NMB precursor (Transmembrane| glycoprotein HGFIN) Length = 572 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = -3 Query: 306 MNHTFCVH--FMMHITVQHGAGAPNGKPPTKYRPKNPHQS 193 +NHT+ ++ F +++TV+ A P PP RP P S Sbjct: 299 VNHTYVLNGTFSLNLTVKAAAPGPCPPPPPPPRPSKPTPS 338
>WNK3_HUMAN (Q9BYP7) Serine/threonine-protein kinase WNK3 (EC 2.7.11.1)| (Protein kinase with no lysine 3) (Protein kinase, lysine-deficient 3) Length = 1743 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = -1 Query: 275 CTSQFNMALEPQTANLQLNTVPRTPIKVEEEEEDLQNNLRSQVWSDGAARHCA 117 C S N+ +PQ L L +T + EE E D ++R Q+ +HC+ Sbjct: 511 CKSMGNVFPQPQNTTLPLAPAQQTGAECEETEVD--QHVRQQLLQRKPQQHCS 561
>LALBA_CANFA (Q9N2G9) Alpha-lactalbumin precursor (Lactose synthase B protein)| Length = 142 Score = 27.7 bits (60), Expect = 7.2 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +1 Query: 55 LLRREGRQFYTRHLPPCNASLAQWR 129 +L +EG ++ H P C+ L QWR Sbjct: 114 ILDKEGIDYWLAHKPLCSEKLEQWR 138
>DYSF_HUMAN (O75923) Dysferlin (Dystrophy-associated fer-1-like protein)| (Fer-1-like protein 1) Length = 2080 Score = 27.3 bits (59), Expect = 9.4 Identities = 19/62 (30%), Positives = 26/62 (41%) Frame = -3 Query: 255 GAGAPNGKPPTKYRPKNPHQSGRRRRRPTE*FEIAGVERRSGSPLC*TSITGRQVPGVKL 76 G GAP RP PH G +R+R ++ + I GRQ+PGV + Sbjct: 179 GPGAPTTPRKLPSRPP-PHYPGIKRKRSAPTSRKLLSDKPQDFQIRVQVIEGRQLPGVNI 237 Query: 75 SP 70 P Sbjct: 238 KP 239 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,735,666 Number of Sequences: 219361 Number of extensions: 983864 Number of successful extensions: 3040 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2971 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3039 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)