>gb|BT018899.1| Zea mays clone EL01T0207E03.d mRNA sequence
          Length = 1585

 Score =  143 bits (72), Expect = 5e-31
 Identities = 147/172 (85%)
 Strand = Plus / Minus

                                                                        
Query: 246  ctctctttctcaatattgtcttccgtggttcctttctgctcggtgtgtttcctgaactta 305
            |||||||||| |||||  |||| ||||| |||||| || ||||||   | |||||||  |
Sbjct: 1389 ctctctttcttaatatattcttgcgtggctcctttttggtcggtgccatccctgaaccca 1330

                                                                        
Query: 306  gggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactgatcacga 365
            | |||||||| ||||||||||||||||| ||||| || |||||||||||||||||||| |
Sbjct: 1329 gagaagtcatccctacagcgctctggtataagtcatttaaccttggcatactgatcacca 1270

                                                                
Query: 366  ctgtaacaacagaaactccaacaataagaggtaaaactggggctggggtcag 417
             || ||| |||||||||||||||||||| || |||||||| |||||||||||
Sbjct: 1269 gtgcaaccacagaaactccaacaataagcggaaaaactggtgctggggtcag 1218

>gb|AY105873.1| Zea mays PCO094136 mRNA sequence
          Length = 809

 Score =  143 bits (72), Expect = 5e-31
 Identities = 147/172 (85%)
 Strand = Plus / Minus

                                                                       
Query: 246 ctctctttctcaatattgtcttccgtggttcctttctgctcggtgtgtttcctgaactta 305
           |||||||||| |||||  |||| ||||| |||||| || ||||||   | |||||||  |
Sbjct: 575 ctctctttcttaatatattcttgcgtggctcctttttggtcggtgccatccctgaaccca 516

                                                                       
Query: 306 gggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactgatcacga 365
           | |||||||| ||||||||||||||||| ||||| || |||||||||||||||||||| |
Sbjct: 515 gagaagtcatccctacagcgctctggtataagtcatttaaccttggcatactgatcacca 456

                                                               
Query: 366 ctgtaacaacagaaactccaacaataagaggtaaaactggggctggggtcag 417
            || ||| |||||||||||||||||||| || |||||||| |||||||||||
Sbjct: 455 gtgcaaccacagaaactccaacaataagcggaaaaactggtgctggggtcag 404

>ref|NM_189191.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3582

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                        
Query: 299  gaacttagggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactg 358
            |||| ||||| ||||||||| ||||| || ||||||||||| || | ||||||||| |||
Sbjct: 3524 gaacctagggtagtcattcccacagcactttggtacaagtcttttagccttggcatgctg 3465

                                                                 
Query: 359  atcacgactgtaacaacagaaactccaacaataagaggtaaaactggggctgg 411
            || || | || ||  || |||||||| ||||||||||| || || ||||||||
Sbjct: 3464 atgaccaatgcaatcacggaaactccgacaataagaggaaatacaggggctgg 3412

>dbj|AK058273.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B11, full
            insert sequence
          Length = 1629

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                        
Query: 299  gaacttagggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactg 358
            |||| ||||| ||||||||| ||||| || ||||||||||| || | ||||||||| |||
Sbjct: 1183 gaacctagggtagtcattcccacagcactttggtacaagtcttttagccttggcatgctg 1124

                                                                 
Query: 359  atcacgactgtaacaacagaaactccaacaataagaggtaaaactggggctgg 411
            || || | || ||  || |||||||| ||||||||||| || || ||||||||
Sbjct: 1123 atgaccaatgcaatcacggaaactccgacaataagaggaaatacaggggctgg 1071

>gb|U92838.1|MMSALH06 Mus musculus sialoadhesin gene, exons 8, 9, and 10
          Length = 1772

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 281 ctgctcggtgtgtttcctgaa 301
           |||||||||||||||||||||
Sbjct: 22  ctgctcggtgtgtttcctgaa 42

>gb|AC121959.3| Mus musculus BAC clone RP24-247N18 from chromosome 3, complete sequence
          Length = 187416

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 369    taacaacagaaactccaacaa 389
              |||||||||||||||||||||
Sbjct: 153736 taacaacagaaactccaacaa 153756

>gb|AC137065.26| Medicago truncatula clone mth2-29h7, complete sequence
          Length = 105004

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 98     aaatattagtcaacaatggtacaaa 122
              |||||||||||||||||| ||||||
Sbjct: 101295 aaatattagtcaacaatgttacaaa 101319

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 299      gaacttagggaagtcattcctacagcgctctggtacaagtc 339
                |||| ||||| ||||||||| ||||| || |||||||||||
Sbjct: 11023970 gaacctagggtagtcattcccacagcactttggtacaagtc 11024010



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                            
Query: 344      aaccttggcatactgatcacgactgtaacaacagaaactccaacaataagaggtaaaact 403
                ||||||||||| ||||| || | || ||  || |||||||| ||||||||||| || || 
Sbjct: 11024109 aaccttggcatgctgatgaccaatgcaatcacggaaactccgacaataagaggaaataca 11024168

                        
Query: 404      ggggctgg 411
                ||||||||
Sbjct: 11024169 ggggctgg 11024176

>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0682B08
          Length = 138376

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 299   gaacttagggaagtcattcctacagcgctctggtacaagtc 339
             |||| ||||| ||||||||| ||||| || |||||||||||
Sbjct: 52852 gaacctagggtagtcattcccacagcactttggtacaagtc 52892



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                         
Query: 344   aaccttggcatactgatcacgactgtaacaacagaaactccaacaataagaggtaaaact 403
             ||||||||||| ||||| || | || ||  || |||||||| ||||||||||| || || 
Sbjct: 52991 aaccttggcatgctgatgaccaatgcaatcacggaaactccgacaataagaggaaataca 53050

                     
Query: 404   ggggctgg 411
             ||||||||
Sbjct: 53051 ggggctgg 53058

>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0487H02
          Length = 145491

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 299    gaacttagggaagtcattcctacagcgctctggtacaagtc 339
              |||| ||||| ||||||||| ||||| || |||||||||||
Sbjct: 126812 gaacctagggtagtcattcccacagcactttggtacaagtc 126852



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                          
Query: 344    aaccttggcatactgatcacgactgtaacaacagaaactccaacaataagaggtaaaact 403
              ||||||||||| ||||| || | || ||  || |||||||| ||||||||||| || || 
Sbjct: 126951 aaccttggcatgctgatgaccaatgcaatcacggaaactccgacaataagaggaaataca 127010

                      
Query: 404    ggggctgg 411
              ||||||||
Sbjct: 127011 ggggctgg 127018

>gb|AC164560.3| Mus musculus BAC clone RP23-192D6 from chromosome 3, complete sequence
          Length = 200505

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 369    taacaacagaaactccaacaa 389
              |||||||||||||||||||||
Sbjct: 170731 taacaacagaaactccaacaa 170711

>emb|AL831736.15| Mouse DNA sequence from clone RP23-32L15 on chromosome 2, complete
             sequence
          Length = 126358

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 281   ctgctcggtgtgtttcctgaa 301
             |||||||||||||||||||||
Sbjct: 11160 ctgctcggtgtgtttcctgaa 11140

>ref|XM_642090.1| Dictyostelium discoideum SNF2-related domain-containing protein
            (DDB0220518), partial mRNA
          Length = 9210

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 365  actgtaacaacagaaactccaaca 388
            ||||||||||||| ||||||||||
Sbjct: 8839 actgtaacaacagtaactccaaca 8862

>gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, complete sequence
          Length = 162238

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   ctttctcaatattgtcttcc 269
             ||||||||||||||||||||
Sbjct: 12002 ctttctcaatattgtcttcc 11983

>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence
          Length = 203478

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    ctttctcaatattgtcttcc 269
              ||||||||||||||||||||
Sbjct: 195772 ctttctcaatattgtcttcc 195753

>emb|AL158091.31| Human DNA sequence from clone RP5-824A14 on chromosome 20 Contains the
             5' end of the BTBD4 gene for BTB (POZ) domain containing
             4, part of a gene for a tissue plasminogen activator
             protein and two CpG islands, complete sequence
          Length = 41932

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   cctttctgctcggtgtgttt 295
             ||||||||||||||||||||
Sbjct: 12460 cctttctgctcggtgtgttt 12441

>gb|AC010034.7| Drosophila melanogaster 3L BAC RP98-4A21 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 154234

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     caaacgccaggctctaaaaa 25
             ||||||||||||||||||||
Sbjct: 84549 caaacgccaggctctaaaaa 84530

>emb|CR354427.7| Zebrafish DNA sequence from clone DKEY-263N17 in linkage group 18,
              complete sequence
          Length = 164758

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    tgtttcaggctctctttctc 256
              ||||||||||||||||||||
Sbjct: 128434 tgtttcaggctctctttctc 128415

>gb|AC094099.3| Homo sapiens chromosome 5 clone RP11-153B10, complete sequence
          Length = 68440

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   tatgtttcaggctctctttc 254
             ||||||||||||||||||||
Sbjct: 64829 tatgtttcaggctctctttc 64810

>gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome 13, complete sequence
          Length = 204294

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     tacaaaatattagtcaacaa 113
              ||||||||||||||||||||
Sbjct: 131842 tacaaaatattagtcaacaa 131823

>gb|AC093528.3| Homo sapiens chromosome 5 clone RP11-297K24, complete sequence
          Length = 198167

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  tatgtttcaggctctctttc 254
            ||||||||||||||||||||
Sbjct: 2684 tatgtttcaggctctctttc 2665

>emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in linkage group 18,
             complete sequence
          Length = 145250

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   tgtttcaggctctctttctc 256
             ||||||||||||||||||||
Sbjct: 91226 tgtttcaggctctctttctc 91207

>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 95      acaaaatattagtcaacaat 114
               ||||||||||||||||||||
Sbjct: 2555987 acaaaatattagtcaacaat 2555968

>gb|AE003474.4| Drosophila melanogaster chromosome 3L, section 8 of 83 of the complete
             sequence
          Length = 312072

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     caaacgccaggctctaaaaa 25
             ||||||||||||||||||||
Sbjct: 25440 caaacgccaggctctaaaaa 25421

>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete
             sequence
          Length = 172826

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    aaatattagtcaacaatggt 117
             ||||||||||||||||||||
Sbjct: 59691 aaatattagtcaacaatggt 59710


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,146,218
Number of Sequences: 3902068
Number of extensions: 4146218
Number of successful extensions: 70437
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70351
Number of HSP's gapped (non-prelim): 84
length of query: 417
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 395
effective length of database: 17,147,199,772
effective search space: 6773143909940
effective search space used: 6773143909940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)