>emb|CR383666.7| Zebrafish DNA sequence from clone DKEY-30H2 in linkage group 2, complete
              sequence
          Length = 144370

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 107    ttttattttgtgctacacttgca 129
              |||||||||||||||||||||||
Sbjct: 115754 ttttattttgtgctacacttgca 115732

>emb|CR381673.7| Zebrafish DNA sequence from clone CH211-209J3 in linkage group 2,
             complete sequence
          Length = 209097

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 107   ttttattttgtgctacacttgca 129
             |||||||||||||||||||||||
Sbjct: 52622 ttttattttgtgctacacttgca 52600

>emb|BX511304.5| Zebrafish DNA sequence from clone DKEYP-94G1 in linkage group 2,
             complete sequence
          Length = 30749

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 107   ttttattttgtgctacacttgca 129
             |||||||||||||||||||||||
Sbjct: 24294 ttttattttgtgctacacttgca 24272

>ref|XM_531935.2| PREDICTED: Canis familiaris similar to multiple PDZ domain protein
            (LOC474708), mRNA
          Length = 7602

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 284  aggaattatcatgtgttcatt 304
            |||||||||||||||||||||
Sbjct: 7426 aggaattatcatgtgttcatt 7446

>emb|AL583825.8| Human DNA sequence from clone RP11-362H12 on chromosome 1 Contains a
             mitochondrial intermediate peptidase (MIPEP) pseudogene
             and a CpG island, complete sequence
          Length = 198794

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 366   tccttcacagtattcacctcc 386
             |||||||||||||||||||||
Sbjct: 41086 tccttcacagtattcacctcc 41106

>emb|AL161449.7| Human DNA sequence from clone RP11-382H24 on chromosome 9p22.1-23
              Contains a peroxiredoxin 1 (PRDX1) pseudogene, a Sjogren
              syndrome antigen B (autoantigen La) (SSB) pseudogene, the
              3' end of the MPDZ gene for multiple PDZ domain protein and
              a CpG island, complete sequence
          Length = 169660

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 284    aggaattatcatgtgttcatt 304
              |||||||||||||||||||||
Sbjct: 145612 aggaattatcatgtgttcatt 145592

>dbj|AB210041.1| Homo sapiens mRNA for MPDZ variant protein, partial cds, clone:
            pf00482
          Length = 7604

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 284  aggaattatcatgtgttcatt 304
            |||||||||||||||||||||
Sbjct: 7431 aggaattatcatgtgttcatt 7451

>gb|AC154302.1| Mus musculus BAC clone RP23-378K2 from chromosome 9, complete sequence
          Length = 167400

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 110   tattttgtgctacacttgcaa 130
             |||||||||||||||||||||
Sbjct: 92555 tattttgtgctacacttgcaa 92575

>dbj|AK098775.1| Homo sapiens cDNA FLJ25909 fis, clone CBR04667, highly similar to
            Homo sapiens multi PDZ domain protein MUPP1 (MUPP1) mRNA
          Length = 2868

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 284  aggaattatcatgtgttcatt 304
            |||||||||||||||||||||
Sbjct: 2695 aggaattatcatgtgttcatt 2715

>dbj|AK058011.1| Homo sapiens cDNA FLJ25282 fis, clone STM06685, highly similar to
            Rattus norvegicus mRNA for multi PDZ domain protein
          Length = 3034

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 284  aggaattatcatgtgttcatt 304
            |||||||||||||||||||||
Sbjct: 2857 aggaattatcatgtgttcatt 2877

>gb|AC101778.9| Mus musculus chromosome 1, clone RP24-125B8, complete sequence
          Length = 173893

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     tatgtcaagtcctaaaataa 59
              ||||||||||||||||||||
Sbjct: 146574 tatgtcaagtcctaaaataa 146555

>gb|AC150413.2| Branchiostoma floridae clone CH302-61A17, complete sequence
          Length = 240260

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 287   aattatcatgtgtt-catttattgaagt 313
             |||||||||||||| |||||||||||||
Sbjct: 77509 aattatcatgtgttacatttattgaagt 77536

>gb|AC132003.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0091D07, complete sequence
          Length = 144652

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 363   gcatccttcacagtattcacctcc 386
             |||||||||||| |||||||||||
Sbjct: 79625 gcatccttcacactattcacctcc 79602

>gb|AC122032.4| Mus musculus BAC clone RP24-402M18 from chromosome 1, complete sequence
          Length = 161153

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     tatgtcaagtcctaaaataa 59
              ||||||||||||||||||||
Sbjct: 113111 tatgtcaagtcctaaaataa 113092

>gb|AC161594.3| Mus musculus BAC clone RP24-153G11 from chromosome 1, complete sequence
          Length = 180135

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    tatgtcaagtcctaaaataa 59
             ||||||||||||||||||||
Sbjct: 20893 tatgtcaagtcctaaaataa 20874

>emb|AL390741.12| Human DNA sequence from clone RP11-38F19 on chromosome 6 Contains the
              DSCR1L1 gene for Down syndrome critical region gene 1-like
              1 (MCIP2, ZAKI-4) and a novel gene, complete sequence
          Length = 128461

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 53     aaaataagattgcaggtacatacc 76
              ||||||||||||||||| ||||||
Sbjct: 116169 aaaataagattgcaggtgcatacc 116192

>emb|AL354952.12| Human DNA sequence from clone RP11-536I1 on chromosome 9 Contains the
            3' end of a pseudogene similar to part of A kinase (PRKA)
            anchor protein 8 (AKAP8), complete sequence
          Length = 54764

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 289  ttatcatgtgttcatttatt 308
            ||||||||||||||||||||
Sbjct: 7827 ttatcatgtgttcatttatt 7846

>emb|AL034452.8|HS682J15 Human DNA sequence from clone RP4-682J15 on chromosome 6p11.2-12.3
            Contains the 3' end of the COL21A1 gene for collagen,
            type XXI, alpha 1 (collagen XXI, collagen, type XX, alpha
            1, COLA1L, COL20A1, DKFZp564B052), complete sequence
          Length = 118431

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 101  taaagattttattttgtgct 120
            ||||||||||||||||||||
Sbjct: 9164 taaagattttattttgtgct 9145

>emb|AL357612.1|ATT22D6 Arabidopsis thaliana DNA chromosome 5, BAC clone T22D6 (ESSA project)
          Length = 89988

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    ttacaacacgtaaagatttt 110
             ||||||||||||||||||||
Sbjct: 44934 ttacaacacgtaaagatttt 44953

>emb|BX571973.15| Zebrafish DNA sequence from clone DKEY-254A11 in linkage group 22,
             complete sequence
          Length = 214325

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   tatcatgtgttcatttattg 309
             ||||||||||||||||||||
Sbjct: 36469 tatcatgtgttcatttattg 36450

>gb|AC158126.7| Mus musculus chromosome 5, clone RP24-220P21, complete sequence
          Length = 166888

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 65     caggtacataccactccacttgcaggtt 92
              ||||||||||||| | ||||||||||||
Sbjct: 128843 caggtacataccagtacacttgcaggtt 128816

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 363      gcatccttcacagtattcacctcc 386
                |||||||||||| |||||||||||
Sbjct: 15335995 gcatccttcacactattcacctcc 15335972

>gb|AC156271.5| Mus musculus 10 BAC RP24-317L8 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 191073

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    taaagattttattttgtgct 120
              ||||||||||||||||||||
Sbjct: 136393 taaagattttattttgtgct 136374

>emb|BX293987.7| Mouse DNA sequence from clone RP24-426C3 on chromosome 2, complete
             sequence
          Length = 57734

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    atatatgtcaagtcctaaaa 56
             ||||||||||||||||||||
Sbjct: 16915 atatatgtcaagtcctaaaa 16934

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 363      gcatccttcacagtattcacctcc 386
                |||||||||||| |||||||||||
Sbjct: 15418932 gcatccttcacactattcacctcc 15418909


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,895,192
Number of Sequences: 3902068
Number of extensions: 3895192
Number of successful extensions: 70941
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 70857
Number of HSP's gapped (non-prelim): 85
length of query: 437
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 415
effective length of database: 17,147,199,772
effective search space: 7116087905380
effective search space used: 7116087905380
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)