ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl01c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VCY2_HUMAN (O14599) Testis-specific basic protein Y 2 (Variably ... 29 3.1
2Y431_NANEQ (P61151) UPF0215 protein NEQ431 28 4.0
3FEOB2_PORGI (Q7MVL1) Ferrous iron transport protein B homolog 28 5.2
4CTLA4_RABIT (P42072) Cytotoxic T-lymphocyte protein 4 precursor ... 28 5.2
5TEGU_EBV (P03186) Large tegument protein 28 6.8
6CAN10_RAT (Q9ES66) Calpain-10 (EC 3.4.22.-) (Calcium-activated n... 28 6.8
7CAN10_MOUSE (Q9ESK3) Calpain-10 (EC 3.4.22.-) (Calcium-activated... 28 6.8
8Y527_MYCPN (P75251) Hypothetical protein MG350.1 homolog (G12_or... 28 6.8

>VCY2_HUMAN (O14599) Testis-specific basic protein Y 2 (Variably charged|
           protein Y 2)
          Length = 106

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 309 GKDGMARPCGRSNVQLLRDSYKAFCYTKNL 220
           G+D  + PC R +  LL +    +C TKNL
Sbjct: 13  GQDHYSHPCPRFSQVLLTEGIMTYCLTKNL 42



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>Y431_NANEQ (P61151) UPF0215 protein NEQ431|
          Length = 198

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
 Frame = +1

Query: 196 TTFSYRYFQIFGVAK-----CFIRIAQQLNIASPTWSCHAIFPGTTSMRVAPRRLGNDS 357
           T F Y Y+Q++G+ K         +A    I  P    H I  G T    +  R G DS
Sbjct: 134 TPFGYTYYQVYGIDKDTASNIINNLAIVSKIPEPARVAHMIARGVTKGDSSKPRAGGDS 192



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>FEOB2_PORGI (Q7MVL1) Ferrous iron transport protein B homolog|
          Length = 725

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/53 (37%), Positives = 26/53 (49%)
 Frame = +3

Query: 30  ILV*CSVLHTTFVDWNTGYPNRWNLFLLQSLFNILHTTLVDWNTGYRNRWTAG 188
           +L+   VL  T V  N  YP++W   L  SL  ILH  L    TG+   W +G
Sbjct: 327 LLMLALVLWITIVGSN--YPSQW---LSDSLVGILHPLLKTRATGFLPDWLSG 374



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>CTLA4_RABIT (P42072) Cytotoxic T-lymphocyte protein 4 precursor (Cytotoxic|
           T-lymphocyte-associated antigen 4) (CTLA-4) (CD152
           antigen)
          Length = 223

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 244 FIRIAQQLNIASPTWSCHAIF 306
           F R   QL++AS TWSC A+F
Sbjct: 6   FQRQGTQLDLASRTWSCAALF 26



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>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
 Frame = +1

Query: 1   AQIQNLFLLQSLFNVL-----------FYIPLLWTGIQATQTDGTFFYYNP 120
           AQI N  ++QSL  VL            YI  ++ G    +TDG+F+ ++P
Sbjct: 144 AQIANSAVVQSLAEVLHGSYNGVAQFILYICDIYAGAIIIETDGSFYLFDP 194



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>CAN10_RAT (Q9ES66) Calpain-10 (EC 3.4.22.-) (Calcium-activated neutral|
           proteinase 10) (CANP 10)
          Length = 666

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
 Frame = -3

Query: 395 PWEG-----LLCICWNRMESFPRRRGATRIDVV--PGKMAWQDHVGEAMFSCCAIRIKHF 237
           PWEG     LL  CW        ++    +D V  PG+  W D   +  F+C   +  H+
Sbjct: 60  PWEGQVKQGLLGDCWFLCACAALQKSRHLLDQVFPPGQPGWSDQEYQGFFTCRIWQFGHW 119



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>CAN10_MOUSE (Q9ESK3) Calpain-10 (EC 3.4.22.-) (Calcium-activated neutral|
           proteinase 10) (CANP 10)
          Length = 666

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
 Frame = -3

Query: 395 PWEG-----LLCICWNRMESFPRRRGATRIDVV--PGKMAWQDHVGEAMFSCCAIRIKHF 237
           PWEG     LL  CW        ++    +D V  PG+  W D   +  F+C   +  H+
Sbjct: 60  PWEGQVKQGLLGDCWFLCACAALQKSQHLLDQVFPPGQPGWSDQKYQGFFTCRIWQFGHW 119



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>Y527_MYCPN (P75251) Hypothetical protein MG350.1 homolog (G12_orf225)|
          Length = 225

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 81  GYPNRWN-LFLLQSLFNILHTTLV 149
           G PN W  +F L SLFN++  TLV
Sbjct: 179 GVPNYWGGIFALYSLFNVIKFTLV 202


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,262,617
Number of Sequences: 219361
Number of extensions: 1333741
Number of successful extensions: 2830
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2830
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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