>NMT_GIBZE (Q4I061) Glycylpeptide N-tetradecanoyltransferase (EC 2.3.1.97)|
           (Peptide N-myristoyltransferase) (Myristoyl-CoA:protein
           N-myristoyltransferase) (NMT)
          Length = 564

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 391 KRRKKKQKPGEEKAPEDQPGSKGIPAPAMFQRWISSL 281
           K++KKK+K    K  E   GSK  P  A F + +  L
Sbjct: 55  KKKKKKKKSKRSKVKEALTGSKSAPTDADFHKALDGL 91

>K0553_HUMAN (Q9UKJ3) Protein KIAA0553|
          Length = 1089

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
 Frame = -3

Query: 397 NRKRRKKKQKPGEEKAPED-------QPGSKGIPAPAMFQR 296
           ++KR+K+K+K  +  AP D       +P   G PAP   +R
Sbjct: 295 SKKRKKRKRKKNKSSAPADSERGPKPEPPGSGSPAPPRRRR 335

>BRD7_MOUSE (O88665) Bromodomain-containing protein 7 (75 kDa bromodomain|
           protein)
          Length = 651

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = -3

Query: 397 NRKRRKKKQKPGEEKAPEDQPGSK 326
           ++ R++KK+K GE++AP ++ G K
Sbjct: 58  HKDRKRKKRKKGEKQAPGEEKGRK 81

>SPAST_MOUSE (Q9QYY8) Spastin|
          Length = 614

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -3

Query: 388 RRKKKQKPGEEKAPEDQPGSKGIPAPA 308
           RRKKK   G   AP   P    +PAPA
Sbjct: 7   RRKKKGSGGASPAPARPPPPAAVPAPA 33

>LAMC3_MOUSE (Q9R0B6) Laminin gamma-3 chain precursor (Laminin 12 gamma 3|
           subunit)
          Length = 1581

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 276 YQRTYARTKFSDSVSISFSHYKRVHGS 196
           Y+ TY R KF  S   SF+ YKR + S
Sbjct: 137 YEITYVRLKFHTSRPESFAIYKRTYAS 163


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,098,874
Number of Sequences: 219361
Number of extensions: 844291
Number of successful extensions: 2971
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2964
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)