>CLFB_STAAS (Q6G644) Clumping factor B precursor (Fibrinogen-binding protein B)|
           (Fibrinogen receptor B)
          Length = 905

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -1

Query: 457 TPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA 320
           +P P+  +  +  +G+D  ++  SD   D   G   D+D D  S++
Sbjct: 579 SPDPDPDSDSDSDSGSDSDSDSDSDSDSDSDSGSDSDSDSDSDSES 624

>CLFB_STAAW (Q8NUL0) Clumping factor B precursor (Fibrinogen-binding protein B)|
           (Fibrinogen receptor B)
          Length = 907

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -1

Query: 457 TPSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA 320
           +P P+  +  +  +G+D  ++  SD   D   G   D+D D  S++
Sbjct: 579 SPDPDPDSDSDSDSGSDSDSDSDSDSDSDSDSGSDSDSDSDSDSES 624

>PTMS_HUMAN (P20962) Parathymosin|
          Length = 101

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = -1

Query: 430 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 332
           EE+ NGA+E  E  ++  ++E  GE+ D ++++
Sbjct: 38  EEEENGAEEEEEETAEDGEEEDEGEEEDEEEEE 70

>ENPL_MOUSE (P08113) Endoplasmin precursor (Heat shock protein 90 kDa beta|
           member 1) (94 kDa glucose-regulated protein) (GRP94)
           (ERP99) (Polymorphic tumor rejection antigen 1) (Tumor
           rejection antigen gp96)
          Length = 802

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -1

Query: 448 PEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQ 323
           PEA   EE     ++++E A D  QDE  GE+MD   ++  +
Sbjct: 751 PEAQVEEEPEEEPEDTSEDAEDSEQDE--GEEMDAGTEEEEE 790

>PTMS_MOUSE (Q9D0J8) Parathymosin|
          Length = 100

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 10/36 (27%), Positives = 23/36 (63%)
 Frame = -1

Query: 430 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQ 323
           EE+ NGA+E  E  ++  +D+  G++ D ++++  +
Sbjct: 38  EEEENGAEEEEEETAEDGEDDDEGDEEDEEEEEEDE 73

>PTMS_RAT (P04550) Parathymosin (Zinc-binding 11.5 kDa protein)|
          Length = 101

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = -1

Query: 430 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 332
           EE+ NGA+E  E  ++  +D+  G++ D ++++
Sbjct: 38  EEEENGAEEEEEETAEDGEDDDEGDEEDEEEEE 70

>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating|
           enzyme subunit 2) (Anthracycline-associated resistance
           ARX)
          Length = 638

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
 Frame = -1

Query: 451 SPEAYTPEEQ-------SNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA*EVS 308
           SPE   P++        +NG+D+ A+P++  AQ++     +D+D++ PS + + S
Sbjct: 548 SPEKVGPKQAEDAAKSIANGSDDGAQPSTSTAQEQDDVLIVDSDEEGPSNSTDCS 602

>PTMS_BOVIN (P08814) Parathymosin|
          Length = 101

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = -1

Query: 430 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 332
           EE+ NGA+E  E  ++  ++E  G++ D ++++
Sbjct: 38  EEEENGAEEEEEETAEDGEEEDDGDEEDEEEEE 70

>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating|
           enzyme subunit 2) (Anthracycline-associated resistance
           ARX)
          Length = 640

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = -1

Query: 421 SNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA*EVS 308
           +NG+D+ A+P++  AQ++     +D+D++D S   +VS
Sbjct: 567 TNGSDDGAQPSTSTAQEQDDVLIVDSDEEDSSNNADVS 604

>FADB_SHEON (Q8EKR9) Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA|
           hydratase (EC 4.2.1.17);
           Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC
           5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35);
           3-hydroxybutyryl-CoA epimerase (EC 5.1.2.
          Length = 716

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +2

Query: 101 KPQLFC-MHLPNVVKEKPLLEEAKTSRNTAETL-HVLLISSQRMKTAI 238
           KP+ FC MH  N V + PL+E  +   ++ ET+  V+  +S+  KT I
Sbjct: 442 KPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPI 489

>YAD7_YEAST (P39728) Hypothetical 30.5 kDa protein in PYK1-SNC1 intergenic|
           region
          Length = 267

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +3

Query: 183 LQKLSM-FYSYPHNV*KQPFLLSP*QAKSTIAQPIMDIKSPQIDTSYAWEGSSLSVSICS 359
           LQKL    Y  P  +  QP LL     K  I   +   K     T Y    +S+ V++CS
Sbjct: 16  LQKLDTNVYFGPCEILTQPILLQYENIKFIIGVNLSTEKIASFYTQYFRNSNSVVVNLCS 75

Query: 360 PTCSS*APSLA 392
           PT ++ A   A
Sbjct: 76  PTTAAVATKKA 86

>IE68_PRVKA (P24827) Immediate-early protein RSP40|
          Length = 364

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 430 EEQSNGADESAEPASDGAQDEHVGEQMDTDKD 335
           E++ +G DE  E   DG +D   GE+ D D+D
Sbjct: 309 EDEDDGEDEEDEEGEDGGEDGEDGEE-DEDED 339

>SCN7A_HUMAN (Q01118) Sodium channel protein type 7 alpha subunit (Sodium|
           channel protein type VII alpha subunit) (Putative
           voltage-gated sodium channel alpha subunit Nax) (Sodium
           channel protein, cardiac and skeletal muscle
           alpha-subunit)
          Length = 1682

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +1

Query: 130 KRRQRKTAIGGGKDV*KHCRNSPCSTHILTTYENSHSFYRPSRPK 264
           K  Q K+  GG K+  K   +S CST  +   E    FY   R K
Sbjct: 851 KEIQSKSGDGGSKEKIKQSSSSECSTVDIAISEEEEMFYGGERSK 895

>CLFB_STAAR (Q6GDH2) Clumping factor B precursor (Fibrinogen-binding protein B)|
           (Fibrinogen receptor B)
          Length = 873

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/45 (31%), Positives = 18/45 (40%)
 Frame = -1

Query: 454 PSPEAYTPEEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA 320
           P PE     E S   D  ++  SD   D   G   D+D D  S +
Sbjct: 570 PEPEPTPDPEPSPEPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDS 614


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,535,516
Number of Sequences: 219361
Number of extensions: 1489213
Number of successful extensions: 4653
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4636
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)