>K125_TOBAC (O23826) 125 kDa kinesin-related protein|
          Length = 1006

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 49/82 (59%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
 Frame = -1

Query: 485  TSGVNTHAEKAFQSSYRDYEPTGETPVRCEPEVPSKGTIESLRAMPIESLMDEFRENHPY 306
            ++ +   A + FQ  Y DYEPTG TP+R EP+VPSK TIESLRAMP+E L++EFREN+ +
Sbjct: 924  STSIEQIALETFQQKYMDYEPTGATPIRSEPDVPSKVTIESLRAMPMEVLLEEFRENNSF 983

Query: 305  ES--SKEPKPSLIPRSPLATLN 246
            ES   KE KPSLIPRSP + +N
Sbjct: 984  ESFQVKEVKPSLIPRSPFSQIN 1005

>K125_ARATH (P82266) Probable 125 kDa kinesin-related protein|
          Length = 1056

 Score = 95.1 bits (235), Expect = 9e-20
 Identities = 45/78 (57%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
 Frame = -1

Query: 476  VNTHAEKAFQSSYRDYEPTGETPVRCEPEVPSKGTIESLRAMPIESLMDEFRENHPYES- 300
            +   A++ FQ  Y +YEPTG TP + EPE+P+K TIESLRAMPIE+L++EFREN+ YES 
Sbjct: 931  IEDKAQETFQQQYMEYEPTGATPTKNEPEIPTKATIESLRAMPIETLVEEFRENNSYESF 990

Query: 299  -SKEPKPSLIPRSPLATL 249
             +KE KP  + RSPL+ L
Sbjct: 991  ATKETKPQQLTRSPLSQL 1008

>DLL3_HUMAN (Q9NYJ7) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3)
          Length = 618

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 18/71 (25%)
 Frame = -1

Query: 170 CPCCARFYGM---LALIQCLLHSC*NVSICCGAAE---------------YSCKKFYDEC 45
           C C   FYG+   ++ + C    C N  +C G A+                +C+K  D C
Sbjct: 298 CTCPRGFYGLRCEVSGVTCADGPCFNGGLCVGGADPDSAYICHCPPGFQGSNCEKRVDRC 357

Query: 44  LLHSC*NVSIC 12
            L  C N  +C
Sbjct: 358 SLQPCRNGGLC 368

>PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate proteoglycan core|
            protein precursor (HSPG) (Perlecan) (PLC)
          Length = 4391

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 313  WFSRNSSIRDSIGIARNDSIVPLLGTSGSH 402
            W +RN  + D++ I+ N SI+ ++GT  S+
Sbjct: 3056 WKTRNQELEDNVHISPNGSIITIVGTRPSN 3085

>DPO3B_CHLPN (Q9Z8K0) DNA polymerase III beta subunit (EC 2.7.7.7)|
          Length = 366

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 387 DFRLTPHRSFTSRLIVPVAALESLLGMCVD 476
           D  +T  +SF+   I+P+ A+E ++ MC D
Sbjct: 180 DAEVTLDKSFSGEYIIPIKAVEEIIKMCSD 209

>PALA_SCHPO (Q09807) pH-response regulator protein palA/rim20|
          Length = 701

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 12/45 (26%), Positives = 31/45 (68%), Gaps = 6/45 (13%)
 Frame = +2

Query: 11  NKLIHSSRNAKDTRHRIFYKNIRRLHNKL------IHSSKNAKDT 127
           +++I+S +++++ + + FY ++ +LH ++      + +S+NAKDT
Sbjct: 447 DEIINSVKSSQNMKEKGFYSDVIKLHEEVSLLKVNVENSQNAKDT 491

>DLL3_MOUSE (O88516) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3) (M-Delta-3)
          Length = 592

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 18/71 (25%)
 Frame = -1

Query: 170 CPCCARFYGM---LALIQCLLHSC*NVSICCGAAE---------------YSCKKFYDEC 45
           C C   FYG+   ++ + C    C N  +C G  +                +C+K  D C
Sbjct: 296 CACPRGFYGLRCEVSGVTCADGPCFNGGLCVGGEDPDSAYVCHCPPGFQGSNCEKRVDRC 355

Query: 44  LLHSC*NVSIC 12
            L  C N  +C
Sbjct: 356 SLQPCQNGGLC 366

>ATG9A_HUMAN (Q7Z3C6) Autophagy-related protein 9A (APG9-like 1)|
          Length = 839

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 9/52 (17%)
 Frame = +3

Query: 348 WHRSQRLDRAFARDFRLTPHRSFTSRLI---------VPVAALESLLGMCVD 476
           WHR + LD  F+R + L     FT  LI         + V A  + L  CVD
Sbjct: 37  WHRIENLDLFFSRVYNLHQKNGFTCMLIGEIFELMQFLFVVAFTTFLVSCVD 88

>RIN1_HUMAN (Q13671) Ras and Rab interactor 1 (Ras interaction/interference|
           protein 1) (Ras inhibitor JC99)
          Length = 783

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +2

Query: 326 THPSGTLLASLATTRSC--LCSGLPAHTSPEFHQS 424
           T P GT L   + TR C  LC  LP  + P F  S
Sbjct: 85  TEPPGTFLVRKSNTRQCQALCMRLPEASGPSFVSS 119

>HELS_METJA (Q58524) Putative ski2-type helicase (EC 3.6.1.-) [Contains:|
           Endonuclease PI-MjaHel (EC 3.1.-.-) (Mja Hel intein)
           (Mja Pep3 intein)]
          Length = 1195

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 5   LHNKLIHSSRNAKDTRHRIFYKNIRRLHNKLIHSSKNAKD 124
           LH K     R +K   H I+ K +R++ NKL   +K+ K+
Sbjct: 490 LHKKYFLKCRISKGVAHYIYSKKLRKIFNKLNMLTKDNKN 529

>MUC24_HUMAN (Q04900) Putative mucin core protein 24 precursor|
           (Multi-glycosylated core protein 24) (MGC-24) (MUC-24)
           (CD164 antigen)
          Length = 189

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 290 VPCSIHRDGSHGTHPSGTLLASLATTRSCLCSGLPAHT--SPEFHQSAHSPCSCF 448
           V C +  D +   HP+ T LA ++   S   + LP  T  +PE  +  +S  SCF
Sbjct: 17  VLCVLSADKNTTQHPNVTTLAPISNVTSAPVTSLPLVTTPAPETCEGRNSCVSCF 71

>RIN1_MOUSE (Q921Q7) Ras and Rab interactor 1 (Ras interaction/interference|
           protein 1)
          Length = 763

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +2

Query: 326 THPSGTLLASLATTRSC--LCSGLPAHTSPEFHQS 424
           T P GT L   + TR C  LC  LP  + P F  S
Sbjct: 84  TEPPGTFLVRKSNTRQCQALCVRLPEASGPSFVSS 118

>POLR_TYMVA (P20128) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1844

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
 Frame = +2

Query: 332  PSGTLLASLATTRSCLCSGL-----PAHTSPEFHQSAHSPCS 442
            P   L+ S  TTRS   +G      P H SP FH   H P S
Sbjct: 1240 PQLKLITSPLTTRSPKLNGATPSASPTHRSPNFHLPPHIPLS 1281

>RIN1_RAT (P97680) Ras and Rab interactor 1 (Ras interaction/interference|
           protein 1)
          Length = 774

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +2

Query: 326 THPSGTLLASLATTRSC--LCSGLPAHTSPEFHQS 424
           T P GT L   + TR C  LC  LP  + P F  S
Sbjct: 84  TEPPGTFLVRKSNTRQCQTLCVRLPEASGPSFVSS 118

>EAA3_CAEEL (Q21353) Putative sodium-dependent excitatory amino acid|
           transporter glt-3
          Length = 532

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 11/37 (29%)
 Frame = +3

Query: 264 RARDERRLG-----------FLARFIGMVLTELIHQG 341
           RARD RR+G           FLA F G++L   IH G
Sbjct: 70  RARDARRIGIVTIIYYMITTFLATFTGIILVSSIHPG 106

>PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)|
          Length = 1101

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = -1

Query: 401 CEPEVPSKGTIESLRAMPIESLMDEFRENHPYESSKEPKPSLIPRSP 261
           C+ +   +     + A P +SL+++  +    ++ K PKPS IP+ P
Sbjct: 463 CDGDREKEEPPSPIEATPPQSLLEKVSKKKTPKTVKMPKPSKIPKPP 509


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,151,780
Number of Sequences: 219361
Number of extensions: 1388467
Number of successful extensions: 4259
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4254
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)