>ref|NM_185267.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2403

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                        
Query: 336  tatctggatgatttcttacggctaaggatctcctgctctttgaggcgctgttgaaacctt 395
            |||||||| |||||||||||||| || |||||||||||||||||||| || |||||||  
Sbjct: 2402 tatctggaagatttcttacggctgagtatctcctgctctttgaggcgatgctgaaaccgc 2343

                                   
Query: 396  gataggcgtgcttggaggctgac 418
            |  ||||||||||||||||||||
Sbjct: 2342 gccaggcgtgcttggaggctgac 2320

>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05,
             complete sequence
          Length = 145044

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 336   tatctggatgatttcttacggctaaggatctcctgctctttgaggcgctgttgaaacctt 395
             |||||||| |||||||||||||| || |||||||||||||||||||| || |||||||  
Sbjct: 27001 tatctggaagatttcttacggctgagtatctcctgctctttgaggcgatgctgaaaccgc 26942

                                    
Query: 396   gataggcgtgcttggaggctgac 418
             |  ||||||||||||||||||||
Sbjct: 26941 gccaggcgtgcttggaggctgac 26919



 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 100   caacccatccatatctgcaaaca 122
             |||||||||||||||||||||||
Sbjct: 27356 caacccatccatatctgcaaaca 27334



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 211   ttagctccttgctcagttccaacattacaggag 243
             ||||||||||||| || |||||| |||||||||
Sbjct: 27134 ttagctccttgcttagatccaacgttacaggag 27102

>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01,
              complete sequence
          Length = 141661

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                          
Query: 336    tatctggatgatttcttacggctaaggatctcctgctctttgaggcgctgttgaaacctt 395
              |||||||| |||||||||||||| || |||||||||||||||||||| || |||||||  
Sbjct: 136528 tatctggaagatttcttacggctgagtatctcctgctctttgaggcgatgctgaaaccgc 136469

                                     
Query: 396    gataggcgtgcttggaggctgac 418
              |  ||||||||||||||||||||
Sbjct: 136468 gccaggcgtgcttggaggctgac 136446



 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 100    caacccatccatatctgcaaaca 122
              |||||||||||||||||||||||
Sbjct: 136883 caacccatccatatctgcaaaca 136861



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 211    ttagctccttgctcagttccaacattacaggag 243
              ||||||||||||| || |||||| |||||||||
Sbjct: 136661 ttagctccttgcttagatccaacgttacaggag 136629

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                           
Query: 336     tatctggatgatttcttacggctaaggatctcctgctctttgaggcgctgttgaaacctt 395
               |||||||| |||||||||||||| || |||||||||||||||||||| || |||||||  
Sbjct: 3149284 tatctggaagatttcttacggctgagtatctcctgctctttgaggcgatgctgaaaccgc 3149225

                                      
Query: 396     gataggcgtgcttggaggctgac 418
               |  ||||||||||||||||||||
Sbjct: 3149224 gccaggcgtgcttggaggctgac 3149202



 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 100     caacccatccatatctgcaaaca 122
               |||||||||||||||||||||||
Sbjct: 3149639 caacccatccatatctgcaaaca 3149617



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 211     ttagctccttgctcagttccaacattacaggag 243
               ||||||||||||| || |||||| |||||||||
Sbjct: 3149417 ttagctccttgcttagatccaacgttacaggag 3149385

>dbj|AK064328.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F08, full
            insert sequence
          Length = 1904

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                        
Query: 336  tatctggatgatttcttacggctaaggatctcctgctctttgaggcgctgttgaaacctt 395
            |||||||| |||||||||||||| || |||||||||||||||||||| || |||||||  
Sbjct: 1401 tatctggaagatttcttacggctgagtatctcctgctctttgaggcgatgctgaaaccgc 1342

                                   
Query: 396  gataggcgtgcttggaggctgac 418
            |  ||||||||||||||||||||
Sbjct: 1341 gccaggcgtgcttggaggctgac 1319



 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 100  caacccatccatatctgcaaaca 122
            |||||||||||||||||||||||
Sbjct: 1756 caacccatccatatctgcaaaca 1734



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 211  ttagctccttgctcagttccaacattacaggag 243
            ||||||||||||| || |||||| |||||||||
Sbjct: 1534 ttagctccttgcttagatccaacgttacaggag 1502

>gb|AF272756.1|AF272756 Zea mays kinesin heavy chain (KIN9) mRNA, partial cds
          Length = 1768

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                        
Query: 347  tttcttacggctaaggatctcctgctctttgaggcgctgttgaaaccttgataggcgtgc 406
            |||||| |||||||||||||| ||||||||||| || || || |||| ||  | ||||||
Sbjct: 1303 tttcttgcggctaaggatctcttgctctttgagccggtgctggaaccgtgccaagcgtgc 1244

                        
Query: 407  ttggaggctgac 418
            ||||||||||||
Sbjct: 1243 ttggaggctgac 1232

>gb|BT024021.1| Zea mays clone EL01N0561C08 mRNA sequence
          Length = 2082

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                        
Query: 347  tttcttacggctaaggatctcctgctctttgaggcgctgttgaaaccttgataggcgtgc 406
            |||||| |||||||||||||| ||||||||||| || || || |||| ||  | ||||||
Sbjct: 1767 tttcttgcggctaaggatctcttgctctttgagccggtgctggaaccgtgccaagcgtgc 1708

                        
Query: 407  ttggaggctgac 418
            ||||||||||||
Sbjct: 1707 ttggaggctgac 1696

>gb|AY104755.1| Zea mays PCO064769 mRNA sequence
          Length = 1444

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                       
Query: 347 tttcttacggctaaggatctcctgctctttgaggcgctgttgaaaccttgataggcgtgc 406
           |||||| |||||||||||||| ||||||||||| || || || |||| ||  | ||||||
Sbjct: 980 tttcttgcggctaaggatctcttgctctttgagccggtgctggaaccgtgccaagcgtgc 921

                       
Query: 407 ttggaggctgac 418
           ||||||||||||
Sbjct: 920 ttggaggctgac 909

>gb|BT018616.1| Zea mays clone EL01N0501D04.d mRNA sequence
          Length = 1538

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 353  acggctaaggatctcctgctctttgaggcgctgttgaaacc 393
            ||||||||| |||||||| || ||||||||||| |||||||
Sbjct: 1073 acggctaagaatctcctgttccttgaggcgctgctgaaacc 1033

>gb|AY110903.1| Zea mays CL34021_1 mRNA sequence
          Length = 822

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 353 acggctaaggatctcctgctctttgaggcgctgttgaaacc 393
           ||||||||| |||||||| || ||||||||||| |||||||
Sbjct: 363 acggctaagaatctcctgttccttgaggcgctgctgaaacc 323

>emb|CR388611.1| Gallus gallus finished cDNA, clone ChEST610e10
          Length = 760

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 239 aggagaccacagaagagaagcat 261
           |||||||||||||||||||||||
Sbjct: 10  aggagaccacagaagagaagcat 32

>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 332     cagctatctggatgatttctt 352
               |||||||||||||||||||||
Sbjct: 4091947 cagctatctggatgatttctt 4091927

>emb|AL592464.24| Human DNA sequence from clone RP11-740P5 on chromosome 1, complete
             sequence
          Length = 120028

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 81    catgagccactgcaaaaatca 101
             |||||||||||||||||||||
Sbjct: 24065 catgagccactgcaaaaatca 24045

>gb|AC020709.4|AC020709 Homo sapiens clone RP11-425F18, complete sequence
          Length = 184104

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 81    catgagccactgcaaaaatca 101
             |||||||||||||||||||||
Sbjct: 14270 catgagccactgcaaaaatca 14250

>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     agtacatgagccactgcaaa 96
              ||||||||||||||||||||
Sbjct: 154719 agtacatgagccactgcaaa 154738

>gb|DQ481664.1| Takifugu rubripes HoxAb gene cluster, complete sequence
          Length = 163052

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      acattttcatttgtcatcaa 28
              ||||||||||||||||||||
Sbjct: 114635 acattttcatttgtcatcaa 114616

>gb|AF268619.5| Homo sapiens chromosome 8 clone RP11-122C21 map q21.3, complete sequence
          Length = 151277

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     cagtaaagaatacaacaata 57
              ||||||||||||||||||||
Sbjct: 133411 cagtaaagaatacaacaata 133430

>gb|AF181450.5| Homo sapiens chromosome 8 clone GS1-5L10 map q21.3, complete sequence
          Length = 123088

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 38   cagtaaagaatacaacaata 57
            ||||||||||||||||||||
Sbjct: 5199 cagtaaagaatacaacaata 5218

>gb|AC137546.33| Medicago truncatula clone mth2-24g3, complete sequence
          Length = 123291

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 140    tcctcataccaaggaaaatggcat 163
              ||||||||||||| ||||||||||
Sbjct: 101045 tcctcataccaagaaaaatggcat 101022

>gb|AC135197.1| Rattus norvegicus BAC CH230-348O5 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 176608

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   gagaagcatctcaagaaatg 272
             ||||||||||||||||||||
Sbjct: 72465 gagaagcatctcaagaaatg 72446

>emb|AL162573.15| Human DNA sequence from clone RP11-275J18 on chromosome 13, complete
              sequence
          Length = 166509

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    tgtcttcttttagctccttg 221
              ||||||||||||||||||||
Sbjct: 134541 tgtcttcttttagctccttg 134522

>emb|AL157826.8| Human DNA sequence from clone RP11-176P17 on chromosome 9p22.3-24.1
              Contains part of a variant of the PTPRD gene for protein
              tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD),
              complete sequence
          Length = 149087

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    catatctgcaaacagttaca 128
              ||||||||||||||||||||
Sbjct: 128125 catatctgcaaacagttaca 128106

>gb|AC103680.2| Homo sapiens chromosome 8, clone RP11-122C21, complete sequence
          Length = 151281

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     cagtaaagaatacaacaata 57
              ||||||||||||||||||||
Sbjct: 133413 cagtaaagaatacaacaata 133432

>gb|AC158504.10| Medicago truncatula clone mth2-151m4, complete sequence
          Length = 117136

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 140 tcctcataccaaggaaaatggcat 163
           ||||||||||||| ||||||||||
Sbjct: 753 tcctcataccaagaaaaatggcat 730

>emb|CR601492.1| full-length cDNA clone CS0DF022YM20 of Fetal brain of Homo sapiens
            (human)
          Length = 1209

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   cagtaaagaatacaacaata 57
            ||||||||||||||||||||
Sbjct: 1186 cagtaaagaatacaacaata 1167

>gb|AF198490.1|AF198490 Homo sapiens 8q22.1 region and MTG8 (CBFA2T1) gene, partial cds
          Length = 32885

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   cagtaaagaatacaacaata 57
            ||||||||||||||||||||
Sbjct: 5108 cagtaaagaatacaacaata 5089

>gb|AC145875.3| Pan troglodytes BAC clone RP43-6O8 from chromosome 7, complete sequence
          Length = 179919

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   tccagtcatgagccactgcg 200
             ||||||||||||||||||||
Sbjct: 59027 tccagtcatgagccactgcg 59046

>gb|AC073624.28| Homo sapiens chromosome 17, clone RP11-537K14, complete sequence
          Length = 145512

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   agccactgcggtgtcttctt 210
             ||||||||||||||||||||
Sbjct: 26976 agccactgcggtgtcttctt 26957

>gb|AC018513.5|AC018513 Homo sapiens chromosome 14 clone RP11-58H3 map 14q31, complete sequence
          Length = 190773

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     gtaaagaatacaacaataat 59
              ||||||||||||||||||||
Sbjct: 157652 gtaaagaatacaacaataat 157671

>gb|AC149137.3| Xenopus tropicalis clone CH216-3L19, complete sequence
          Length = 155697

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    cagtaaagaatacaacaata 57
             ||||||||||||||||||||
Sbjct: 34143 cagtaaagaatacaacaata 34162

>emb|BX470203.6| Mouse DNA sequence from clone RP23-290J11 on chromosome X, complete
             sequence
          Length = 53518

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   gagaagcatctcaagaaatg 272
             ||||||||||||||||||||
Sbjct: 51494 gagaagcatctcaagaaatg 51475

>gb|AF131817.1|AF131817 Homo sapiens clone 25023 mRNA sequence
          Length = 1466

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   cagtaaagaatacaacaata 57
            ||||||||||||||||||||
Sbjct: 1423 cagtaaagaatacaacaata 1404

>gb|AY449458.1| Oikopleura dioica clone BACOIKO002 4xj18, complete sequence
          Length = 188193

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     tttgtcatcaaaaacaatat 37
              ||||||||||||||||||||
Sbjct: 144690 tttgtcatcaaaaacaatat 144709

>gb|AF007942.2| Lates calcarifer tyrosine hydroxylase 1 (TH1) gene, complete cds
          Length = 8984

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 8   cacattttcatttgtcatcaaaaa 31
           |||||||||||| |||||||||||
Sbjct: 953 cacattttcattggtcatcaaaaa 930


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,004,354
Number of Sequences: 3902068
Number of extensions: 5004354
Number of successful extensions: 152372
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 152233
Number of HSP's gapped (non-prelim): 139
length of query: 418
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 396
effective length of database: 17,147,199,772
effective search space: 6790291109712
effective search space used: 6790291109712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)