ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl01b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464046.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.022
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
3dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
4dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
5dbj|AK100570.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.022
6dbj|AK059533.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.022
7gb|AC133958.4| Mus musculus BAC clone RP23-367E13 from 14, compl... 44 0.34
8gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia regio... 42 1.4
9emb|BX890598.10| Zebrafish DNA sequence from clone DKEYP-22H4 in... 42 1.4
10emb|CR848687.8| Zebrafish DNA sequence from clone DKEY-46H11 in ... 42 1.4
11emb|AL354763.17| Human DNA sequence from clone RP11-357L1 on chr... 42 1.4
12gb|AC009408.4| Homo sapiens BAC clone RP11-227I18 from 2, comple... 42 1.4
13emb|BX248394.5| Zebrafish DNA sequence from clone CH211-205P19 i... 42 1.4
14gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, com... 42 1.4
15emb|CR391944.10| Zebrafish DNA sequence from clone CH211-95K19 i... 42 1.4
16gb|AC147033.2| Pan troglodytes BAC clone RP43-99I5 from 7, compl... 40 5.3
17ref|NM_178828.3| Homo sapiens chromosome 9 open reading frame 79... 40 5.3
18gb|AC021044.5| Arabidopsis thaliana chromosome I BAC F3H9 genomi... 40 5.3
19gb|AC122832.4| Mus musculus BAC clone RP23-179D3 from 12, comple... 40 5.3
20gb|AC149474.15| Medicago truncatula clone mth2-122l24, complete ... 40 5.3
21emb|AL772337.17| Human DNA sequence from clone XXyac-21GA2 on ch... 40 5.3
22emb|AL357352.11| Human DNA sequence from clone RP11-799G19 on ch... 40 5.3
23emb|AL138956.17| Human DNA sequence from clone RP11-16D22 on chr... 40 5.3
24gb|AC116157.4| Homo sapiens chromosome 15, clone RP11-1006B19, c... 40 5.3
25gb|AC023449.11| Homo sapiens chromosome 15, clone RP11-345J18, c... 40 5.3
26dbj|AK125845.1| Homo sapiens cDNA FLJ43857 fis, clone TESTI4007239 40 5.3
27dbj|AK093206.1| Homo sapiens cDNA FLJ35887 fis, clone TESTI2009097 40 5.3
28dbj|AK093185.1| Homo sapiens cDNA FLJ35866 fis, clone TESTI2007906 40 5.3
29gb|AC069529.22| Homo sapiens 3 BAC RP11-332I3 (Roswell Park Canc... 40 5.3
30gb|AC104161.2| Homo sapiens chromosome 3 clone RP11-32J15, compl... 40 5.3
31gb|AC022684.5|AC022684 Homo sapiens, clone RP11-59H18, complete ... 40 5.3
32emb|BX510931.8| Zebrafish DNA sequence from clone CH211-132M19 i... 40 5.3
33gb|AC069471.4|AC069471 Arabidopsis thaliana chromosome 1 BAC F13... 40 5.3
34gb|AC092936.9| Homo sapiens 12 BAC RP11-286J13 (Roswell Park Can... 40 5.3
35gb|AC012449.7| Homo sapiens BAC clone RP11-321K13 from 2, comple... 40 5.3
36gb|AC079790.6| Homo sapiens BAC clone RP11-484E6 from 2, complet... 40 5.3
37gb|AC007349.1|AC007349 Homo sapiens clone RP11-85E16 from 7p14-1... 40 5.3
38gb|AC144364.3| Didelphis virginiana clone LB3-157N2, complete se... 40 5.3
39emb|Z31692.1|SCHXT7 S.cerevisiae (MC996) HXT7 gene for hexose tr... 40 5.3
40gb|AC004738.1|AC004738 Homo sapiens Chromosome 15q11-q13 PAC clo... 40 5.3
41emb|CR933820.6| Zebrafish DNA sequence from clone DKEY-183J2 in ... 40 5.3
42emb|AL840638.9| Zebrafish DNA sequence from clone DKEY-224J12, c... 40 5.3
43emb|AL929548.8| Zebrafish DNA sequence from clone CH211-159E17, ... 40 5.3
44emb|AL954698.9| Zebrafish DNA sequence from clone CH211-233B16 i... 40 5.3
45gb|U51032.1|YSCD9651 Saccharomyces cerevisiae chromosome IV cosm... 40 5.3
46gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold 40 5.3
47emb|AL834438.1|HSM805532 Homo sapiens mRNA; cDNA DKFZp434J1915 (... 40 5.3 
>ref|XM_464046.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4219

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 255  gaacaaatgcagctcccagctgtgcctcacacaggg 290
            ||||||| |||||||| |||||||||||||| ||||
Sbjct: 4033 gaacaaaagcagctcctagctgtgcctcacaaaggg 3998
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 255     gaacaaatgcagctcccagctgtgcctcacacaggg 290
               ||||||| |||||||| |||||||||||||| ||||
Sbjct: 1888707 gaacaaaagcagctcctagctgtgcctcacaaaggg 1888672
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>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0081C13
          Length = 144624

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 255   gaacaaatgcagctcccagctgtgcctcacacaggg 290
             ||||||| |||||||| |||||||||||||| ||||
Sbjct: 28268 gaacaaaagcagctcctagctgtgcctcacaaaggg 28233
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>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0585B01
          Length = 133231

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 255    gaacaaatgcagctcccagctgtgcctcacacaggg 290
              ||||||| |||||||| |||||||||||||| ||||
Sbjct: 125351 gaacaaaagcagctcctagctgtgcctcacaaaggg 125316
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>dbj|AK100570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105B17, full
            insert sequence
          Length = 4219

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 255  gaacaaatgcagctcccagctgtgcctcacacaggg 290
            ||||||| |||||||| |||||||||||||| ||||
Sbjct: 4033 gaacaaaagcagctcctagctgtgcctcacaaaggg 3998
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>dbj|AK059533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D10, full
            insert sequence
          Length = 1337

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 255  gaacaaatgcagctcccagctgtgcctcacacaggg 290
            ||||||| |||||||| |||||||||||||| ||||
Sbjct: 1151 gaacaaaagcagctcctagctgtgcctcacaaaggg 1116
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>gb|AC133958.4| Mus musculus BAC clone RP23-367E13 from 14, complete sequence
          Length = 170336

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 98    agctagcttttctgatttgggt 119
             ||||||||||||||||||||||
Sbjct: 76471 agctagcttttctgatttgggt 76492
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>gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 2 of
              11 of the complete sequence
          Length = 613322

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 176    aaattaattcagcccaaagta 196
              |||||||||||||||||||||
Sbjct: 297918 aaattaattcagcccaaagta 297898
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>emb|BX890598.10| Zebrafish DNA sequence from clone DKEYP-22H4 in linkage group 7,
             complete sequence
          Length = 177943

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 123   ataaaataatacagtttaatttaat 147
             ||||||||||||| |||||||||||
Sbjct: 95079 ataaaataatacaatttaatttaat 95055
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>emb|CR848687.8| Zebrafish DNA sequence from clone DKEY-46H11 in linkage group 7,
             complete sequence
          Length = 87887

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 123   ataaaataatacagtttaatttaat 147
             ||||||||||||| |||||||||||
Sbjct: 19911 ataaaataatacaatttaatttaat 19887
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>emb|AL354763.17| Human DNA sequence from clone RP11-357L1 on chromosome 13 Contains an
             ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G
             variant 1 (ATP6V1G1) pseudogene, complete sequence
          Length = 192963

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 176   aaattaattcagcccaaagta 196
             |||||||||||||||||||||
Sbjct: 24210 aaattaattcagcccaaagta 24190
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>gb|AC009408.4| Homo sapiens BAC clone RP11-227I18 from 2, complete sequence
          Length = 169765

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 252   agggaacaaatgcagctcccagctg 276
             |||||||||||||||||| ||||||
Sbjct: 94976 agggaacaaatgcagctcgcagctg 94952
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>emb|BX248394.5| Zebrafish DNA sequence from clone CH211-205P19 in linkage group 12,
             complete sequence
          Length = 143099

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 125   aaaataatacagtttaattta 145
             |||||||||||||||||||||
Sbjct: 60942 aaaataatacagtttaattta 60922
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>gb|AC122122.14| Mus musculus chromosome 1, clone RP23-15D21, complete sequence
          Length = 204416

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 120   atcataaaataatacagtttaattt 144
             |||||||||||||| ||||||||||
Sbjct: 68527 atcataaaataatatagtttaattt 68503
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>emb|CR391944.10| Zebrafish DNA sequence from clone CH211-95K19 in linkage group 3,
             complete sequence
          Length = 172806

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 122   cataaaataatacagtttaatttaa 146
             |||||||||||| ||||||||||||
Sbjct: 42074 cataaaataataaagtttaatttaa 42098
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>gb|AC147033.2| Pan troglodytes BAC clone RP43-99I5 from 7, complete sequence
          Length = 188305

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   cttctgaaacttctctttca 332
             ||||||||||||||||||||
Sbjct: 13046 cttctgaaacttctctttca 13065
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>ref|NM_178828.3| Homo sapiens chromosome 9 open reading frame 79 (C9orf79), mRNA
          Length = 4445

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  cccagctgtgcctcacacag 288
            ||||||||||||||||||||
Sbjct: 2580 cccagctgtgcctcacacag 2561
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>gb|AC021044.5| Arabidopsis thaliana chromosome I BAC F3H9 genomic sequence, complete
              sequence
          Length = 121720

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    tttaatttaatcaaacctaa 156
              ||||||||||||||||||||
Sbjct: 109126 tttaatttaatcaaacctaa 109107
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>gb|AC122832.4| Mus musculus BAC clone RP23-179D3 from 12, complete sequence
          Length = 224056

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    aggagctgatattacaagca 175
              ||||||||||||||||||||
Sbjct: 127535 aggagctgatattacaagca 127516
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>gb|AC149474.15| Medicago truncatula clone mth2-122l24, complete sequence
          Length = 129008

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    aaataatacagtttaattta 145
              ||||||||||||||||||||
Sbjct: 105959 aaataatacagtttaattta 105978
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>emb|AL772337.17| Human DNA sequence from clone XXyac-21GA2 on chromosome 9 Contains a
             pseudogene similar to part of E74-like factor 2 (ets
             domain transcription factor) (EU32, NERF, NERF-2,
             NERF-1A,NERF-1B) (ELF2), a cathepsin L (MEP, CATL) (CTSL)
             pseudogene, a pseudogene similar to part of a
             fructose-1,6-bisphosphatase protein, two novel genes, a
             novel gene (FLJ35866) and a CpG island, complete sequence
          Length = 95932

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   cccagctgtgcctcacacag 288
             ||||||||||||||||||||
Sbjct: 78967 cccagctgtgcctcacacag 78948
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>emb|AL357352.11| Human DNA sequence from clone RP11-799G19 on chromosome 6 Contains part
             of the TRDN gene for triadin (TDN, TRIADIN), complete
             sequence
          Length = 106601

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   aaataatacagtttaattta 145
             ||||||||||||||||||||
Sbjct: 61713 aaataatacagtttaattta 61694
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>emb|AL138956.17| Human DNA sequence from clone RP11-16D22 on chromosome 13 Contains the
             5' end of a novel gene, complete sequence
          Length = 165257

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   gggaacaaatgcagctccca 272
             ||||||||||||||||||||
Sbjct: 44922 gggaacaaatgcagctccca 44941
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>gb|AC116157.4| Homo sapiens chromosome 15, clone RP11-1006B19, complete sequence
          Length = 217659

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   aaaataatacagtttaattt 144
             ||||||||||||||||||||
Sbjct: 34282 aaaataatacagtttaattt 34301
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>gb|AC023449.11| Homo sapiens chromosome 15, clone RP11-345J18, complete sequence
          Length = 175336

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    ttttctgatttgggtatcat 124
              ||||||||||||||||||||
Sbjct: 137731 ttttctgatttgggtatcat 137712
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>dbj|AK125845.1| Homo sapiens cDNA FLJ43857 fis, clone TESTI4007239
          Length = 4445

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  cccagctgtgcctcacacag 288
            ||||||||||||||||||||
Sbjct: 2580 cccagctgtgcctcacacag 2561
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>dbj|AK093206.1| Homo sapiens cDNA FLJ35887 fis, clone TESTI2009097
          Length = 2601

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  cccagctgtgcctcacacag 288
            ||||||||||||||||||||
Sbjct: 2048 cccagctgtgcctcacacag 2029
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>dbj|AK093185.1| Homo sapiens cDNA FLJ35866 fis, clone TESTI2007906
          Length = 2168

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 269 cccagctgtgcctcacacag 288
           ||||||||||||||||||||
Sbjct: 303 cccagctgtgcctcacacag 284
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>gb|AC069529.22| Homo sapiens 3 BAC RP11-332I3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 173202

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   taaaataatacagtttaatttaat 147
             ||||||||||||||||| ||||||
Sbjct: 61516 taaaataatacagtttattttaat 61493
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>gb|AC104161.2| Homo sapiens chromosome 3 clone RP11-32J15, complete sequence
          Length = 166659

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    acagctagcttttctgattt 115
             ||||||||||||||||||||
Sbjct: 86421 acagctagcttttctgattt 86402
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>gb|AC022684.5|AC022684 Homo sapiens, clone RP11-59H18, complete sequence
          Length = 164879

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    aaaataatacagtttaattt 144
              ||||||||||||||||||||
Sbjct: 133021 aaaataatacagtttaattt 133040
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>emb|BX510931.8| Zebrafish DNA sequence from clone CH211-132M19 in linkage group 21,
              complete sequence
          Length = 181237

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    aaataatacagtttaattta 145
              ||||||||||||||||||||
Sbjct: 175001 aaataatacagtttaattta 174982
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>gb|AC069471.4|AC069471 Arabidopsis thaliana chromosome 1 BAC F13K9 genomic sequence, complete
              sequence
          Length = 126991

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    tttaatttaatcaaacctaa 156
              ||||||||||||||||||||
Sbjct: 122257 tttaatttaatcaaacctaa 122276
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>gb|AC092936.9| Homo sapiens 12 BAC RP11-286J13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 217112

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 152   cctaaggagctgatattacaagca 175
             |||||| |||||||||||||||||
Sbjct: 54829 cctaagtagctgatattacaagca 54852
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>gb|AC012449.7| Homo sapiens BAC clone RP11-321K13 from 2, complete sequence
          Length = 109335

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 124   taaaataatacagtttaatttaat 147
             ||||||||||||||||||| ||||
Sbjct: 88283 taaaataatacagtttaatataat 88306
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>gb|AC079790.6| Homo sapiens BAC clone RP11-484E6 from 2, complete sequence
          Length = 161723

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 123    ataaaataatacagtttaatttaa 146
              ||||||||||||| ||||||||||
Sbjct: 158631 ataaaataatacaatttaatttaa 158654
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>gb|AC007349.1|AC007349 Homo sapiens clone RP11-85E16 from 7p14-15, complete sequence
          Length = 175212

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   cttctgaaacttctctttca 332
             ||||||||||||||||||||
Sbjct: 75248 cttctgaaacttctctttca 75267
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>gb|AC144364.3| Didelphis virginiana clone LB3-157N2, complete sequence
          Length = 140935

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 123   ataaaataatacagtttaatttaatcaa 150
             ||||||||| |||||||||||| |||||
Sbjct: 67088 ataaaataagacagtttaatttgatcaa 67061
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>emb|Z31692.1|SCHXT7 S.cerevisiae (MC996) HXT7 gene for hexose transporter
          Length = 2209

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  aaaataatacagtttaattt 144
            ||||||||||||||||||||
Sbjct: 2047 aaaataatacagtttaattt 2066
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>gb|AC004738.1|AC004738 Homo sapiens Chromosome 15q11-q13 PAC clone pDJ351h23 from the
              Prader-Willi/Angelman Syndrome region, complete sequence
          Length = 147404

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    ttttctgatttgggtatcat 124
              ||||||||||||||||||||
Sbjct: 147211 ttttctgatttgggtatcat 147230
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>emb|CR933820.6| Zebrafish DNA sequence from clone DKEY-183J2 in linkage group 11,
             complete sequence
          Length = 230267

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 122   cataaaataatacagtttaattta 145
             |||||||||||| |||||||||||
Sbjct: 77520 cataaaataataaagtttaattta 77497
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>emb|AL840638.9| Zebrafish DNA sequence from clone DKEY-224J12, complete sequence
          Length = 177617

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    ataaaataatacagtttaat 142
              ||||||||||||||||||||
Sbjct: 120498 ataaaataatacagtttaat 120479
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>emb|AL929548.8| Zebrafish DNA sequence from clone CH211-159E17, complete sequence
          Length = 168842

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 122    cataaaataatacagtttaattta 145
              |||||||||||| |||||||||||
Sbjct: 159633 cataaaataataaagtttaattta 159656
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>emb|AL954698.9| Zebrafish DNA sequence from clone CH211-233B16 in linkage group 6,
            complete sequence
          Length = 177161

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 134  cagtttaatttaatcaaacc 153
            ||||||||||||||||||||
Sbjct: 6942 cagtttaatttaatcaaacc 6961
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>gb|U51032.1|YSCD9651 Saccharomyces cerevisiae chromosome IV cosmid 9651
          Length = 39313

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   aaaataatacagtttaattt 144
             ||||||||||||||||||||
Sbjct: 20948 aaaataatacagtttaattt 20929
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>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 123   ataaaataatacagtttaatttaatcaa 150
             ||||||||| |||||||||||| |||||
Sbjct: 67088 ataaaataagacagtttaatttgatcaa 67061
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>emb|AL834438.1|HSM805532 Homo sapiens mRNA; cDNA DKFZp434J1915 (from clone DKFZp434J1915)
          Length = 3631

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  cccagctgtgcctcacacag 288
            ||||||||||||||||||||
Sbjct: 1678 cccagctgtgcctcacacag 1659


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,955,059
Number of Sequences: 3902068
Number of extensions: 3955059
Number of successful extensions: 81837
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81709
Number of HSP's gapped (non-prelim): 128
length of query: 400
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 378
effective length of database: 17,147,199,772
effective search space: 6481641513816
effective search space used: 6481641513816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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