ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl01b04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC154856.2| Mus musculus BAC clone RP23-20C2 from 13, complete sequence Length = 248953 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||||||||||||||| | ||||||||||||||| Sbjct: 102269 cctcctcctcttctttctcctcctccttctcttctttctcctcct 102225 Score = 48.1 bits (24), Expect = 0.025 Identities = 38/42 (90%), Gaps = 3/42 (7%) Strand = Plus / Minus Query: 412 tctttctcctcctcctgcgcttctttctcctcctgcttctct 453 |||||||||||||||| ||||||||||||||| ||||||| Sbjct: 102276 tctttctcctcctcct---cttctttctcctcctccttctct 102238 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 ctcttctttctcctcctcct 427 |||||||||||||||||||| Sbjct: 102241 ctcttctttctcctcctcct 102222
>gb|AC025226.4|AC025226 Homo sapiens BAC clone RP11-57J19 from Y, complete sequence Length = 168066 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcc 444 ||||| ||||||||||||||||||||| ||| |||||||||||| Sbjct: 35356 cctcctcctcttctttctcctcctcctccgcctctttctcctcc 35399 Score = 42.1 bits (21), Expect = 1.5 Identities = 35/39 (89%), Gaps = 3/39 (7%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| |||||||||||||||| ||||||||||||||| Sbjct: 35344 cctcctctttctcctcctcct---cttctttctcctcct 35379
>emb|AJ271735.1|HSA271735 Homo sapiens Xq pseudoautosomal region; segment 1/2 Length = 240000 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcc 444 ||||| ||||||||||||||||||||| ||| |||||||||||| Sbjct: 135479 cctcctcctcttctttctcctcctcctccgcctctttctcctcc 135436 Score = 46.1 bits (23), Expect = 0.099 Identities = 40/45 (88%), Gaps = 3/45 (6%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| |||||||||||||||| ||||||||||||||| Sbjct: 135497 cctcctcctcctctttctcctcctcct---cttctttctcctcct 135456
>emb|CT574593.2| Pan troglodytes chromosome X clone RP43-059H19 map Xq28, complete sequence Length = 151142 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcc 444 ||||| ||||||||||||||||||||| ||| |||||||||||| Sbjct: 1752 cctcctcctcttctttctcctcctcctccgcctctttctcctcc 1795 Score = 42.1 bits (21), Expect = 1.5 Identities = 35/39 (89%), Gaps = 3/39 (7%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| |||||||||||||||| ||||||||||||||| Sbjct: 1740 cctcctctttctcctcctcct---cttctttctcctcct 1775
>gb|AC141639.3| Mus musculus BAC clone RP23-354J7 from chromosome 18, complete sequence Length = 216358 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||||||||||||||||| | ||||||||||||||| Sbjct: 13263 cctcttctttctcctcctcctcctcttctttctcctcct 13301 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 13278 cctcctcctcttctttctcctcctcct 13304
>gb|AC165418.6| Mus musculus chromosome 7, clone RP23-148M16, complete sequence Length = 205525 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||||||||||||||| | ||| ||||||||||| Sbjct: 63637 cctcctcctcttctttctcctcctcctcctcttttttctcctcct 63681 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||| | ||||||||||| | ||||||||||||||| Sbjct: 63622 cctcttcctcctcctcctcctcctcttctttctcctcct 63660
>emb|AL606506.11| Mouse DNA sequence from clone RP23-11A24 on chromosome 11 Contains a novel pseudogene and two CpG islands, complete sequence Length = 213971 Score = 58.0 bits (29), Expect = 3e-05 Identities = 46/51 (90%), Gaps = 3/51 (5%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttct 451 ||||| ||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 126270 cctcctcctcttctttctcctcctcct---cttctttctcctcctccttct 126317 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 409 tcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||||||||||||||| | ||||||||||||||| Sbjct: 126257 tcttctttctcctcctcctcctcttctttctcctcct 126293
>gb|AC021037.6| Homo sapiens chromosome 10 clone RP11-44D15, complete sequence Length = 179918 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||| ||||||| ||||||||||| |||||||| |||||||| Sbjct: 6715 cctccgcttcttcttcctcctcctcctccgcttcttcctcctcct 6759
>gb|AC149091.3| Mus musculus BAC clone RP23-49P22 from 7, complete sequence Length = 240997 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||||||||||||||| | ||| ||||||||||| Sbjct: 147947 cctcctcctcttctttctcctcctcctcctcttttttctcctcct 147903 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||| | ||||||||||| | ||||||||||||||| Sbjct: 147962 cctcttcctcctcctcctcctcctcttctttctcctcct 147924
>gb|AC125126.4| Mus musculus BAC clone RP24-282D2 from chromosome 7, complete sequence Length = 175906 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| ||||||||||||||||||||||| |||| | |||||||| Sbjct: 3291 ctcctcctcttctttctcctcctcctgctcttcctgctcctcct 3334 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 3332 cctcctcctcttctttctcctcctcct 3358 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 408 ctcttctttctcctcctcctgcgcttctttctcctcct 445 |||||| | ||||||||||| | ||||||||||||||| Sbjct: 3318 ctcttcctgctcctcctcctcctcttctttctcctcct 3355
>emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 in linkage group 20, complete sequence Length = 151552 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| ||||||||||||||||||||| | ||||||||| ||||| Sbjct: 87976 ctcctcctcttctttctcctcctcctccacttctttcttctcct 87933 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||| |||| |||||||| | ||| ||||||||||| Sbjct: 88013 cctcctcctcttcattcttctcctcctcctcttatttctcctcct 87969
>gb|AC132432.4| Mus musculus BAC clone RP23-213H1 from 7, complete sequence Length = 198307 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| ||||||||||||||||||||||| |||| | |||||||| Sbjct: 165024 ctcctcctcttctttctcctcctcctgctcttcctgctcctcct 165067 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 165065 cctcctcctcttctttctcctcctcct 165091 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 408 ctcttctttctcctcctcctgcgcttctttctcctcct 445 |||||| | ||||||||||| | ||||||||||||||| Sbjct: 165051 ctcttcctgctcctcctcctcctcttctttctcctcct 165088
>ref|XM_473064.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2541 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 330 agccttccttctgcgcttctttccagt 356 ||||||||||||||||||||||||||| Sbjct: 2532 agccttccttctgcgcttctttccagt 2506
>ref|XM_895552.2| PREDICTED: Mus musculus hypothetical LOC619959 (LOC619959), mRNA Length = 1215 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttct 451 ||||| ||||||||| ||| ||||||| | ||||||||||||||| ||||| Sbjct: 736 cctcctcctcttcttcctcttcctcctcctcttctttctcctccttcttct 686
>gb|AC133087.3| Mus musculus BAC clone RP24-135I21 from chromosome 13, complete sequence Length = 157768 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| |||||||||||||||||| |||||| |||||||| Sbjct: 93850 cctcctctttctcctcctcctgctcttcttcctcctcct 93812
>gb|AC127411.3| Mus musculus BAC clone RP23-60E24 from chromosome 5, complete sequence Length = 217636 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||||||||||||||||| | |||||| |||||||| Sbjct: 200730 cctcttctttctcctcctccttctcttcttcctcctcct 200768
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 330 agccttccttctgcgcttctttccagt 356 ||||||||||||||||||||||||||| Sbjct: 135105 agccttccttctgcgcttctttccagt 135131
>gb|AC153837.4| Mus musculus 6 BAC RP23-192D5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232039 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttct 451 ||||| ||||||||| ||| ||||||| | ||||||||||||||| ||||| Sbjct: 81768 cctcctcctcttcttcctcttcctcctcctcttctttctcctccttcttct 81818
>dbj|AK132717.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4922502C19 product:unclassifiable, full insert sequence Length = 1203 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttct 451 ||||| ||||||||| ||| ||||||| | ||||||||||||||| ||||| Sbjct: 736 cctcctcctcttcttcctcttcctcctcctcttctttctcctccttcttct 686
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 330 agccttccttctgcgcttctttccagt 356 ||||||||||||||||||||||||||| Sbjct: 25014520 agccttccttctgcgcttctttccagt 25014546
>dbj|AB117993.1| Oryza sativa (japonica cultivar-group) bip106 mRNA for BRI1-KD interacting protein 106, partial cds Length = 709 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 330 agccttccttctgcgcttctttccagt 356 ||||||||||||||||||||||||||| Sbjct: 700 agccttccttctgcgcttctttccagt 674
>dbj|AK068884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002E10, full insert sequence Length = 2250 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 330 agccttccttctgcgcttctttccagt 356 ||||||||||||||||||||||||||| Sbjct: 1887 agccttccttctgcgcttctttccagt 1861
>dbj|AK068612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155D11, full insert sequence Length = 3038 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 330 agccttccttctgcgcttctttccagt 356 ||||||||||||||||||||||||||| Sbjct: 2685 agccttccttctgcgcttctttccagt 2659
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 330 agccttccttctgcgcttctttccagt 356 ||||||||||||||||||||||||||| Sbjct: 142757 agccttccttctgcgcttctttccagt 142783
>emb|AL929433.10| Mouse DNA sequence from clone RP23-193M23 on chromosome 4, complete sequence Length = 198426 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttct 451 ||||| ||||||||||||||||||||| | ||| || |||||||| ||||| Sbjct: 125212 cctcctcctcttctttctcctcctcctccacttgttcctcctcctccttct 125262
>emb|AL731678.17| Mouse DNA sequence from clone RP23-39H12 on chromosome X, complete sequence Length = 230186 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttct 451 ||||| ||||||||||||||||||||| | | |||| |||||||| ||||| Sbjct: 110636 cctcctcctcttctttctcctcctcctcctcctcttcctcctcctccttct 110686
>gb|AC165329.8| Mus musculus chromosome 3, clone wi1-298L18, complete sequence Length = 40686 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 412 tctttctcctcctcctgcgcttctttctcctcctgcttctct 453 |||||||||||||||| | |||||| |||||||| ||||||| Sbjct: 1341 tctttctcctcctcctcctcttcttcctcctcctccttctct 1382
>gb|AC142167.4| Mus musculus BAC clone RP24-117F4 from chromosome 3, complete sequence Length = 190937 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 412 tctttctcctcctcctgcgcttctttctcctcctgcttctct 453 |||||||||||||||| | |||||| |||||||| ||||||| Sbjct: 182198 tctttctcctcctcctcctcttcttcctcctcctccttctct 182239
>gb|AC125176.4| Mus musculus BAC clone RP24-574O24 from chromosome 3, complete sequence Length = 162693 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 412 tctttctcctcctcctgcgcttctttctcctcctgcttctct 453 |||||||||||||||| | |||||| |||||||| ||||||| Sbjct: 159851 tctttctcctcctcctcctcttcttcctcctcctccttctct 159892
>gb|AC122346.4| Mus musculus BAC clone RP23-368L6 from 13, complete sequence Length = 198130 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 |||| |||| ||||||||||| | ||||||||||||||| |||||| Sbjct: 130848 cctcctcttcctcctcctcctcctcttctttctcctcctccttctc 130803 Score = 46.1 bits (23), Expect = 0.099 Identities = 38/43 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctc 443 ||||| |||||||||||| |||||||| | |||| |||||||| Sbjct: 130902 cctcctcctcttctttcttctcctcctcctcttccttctcctc 130860 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 130833 cctcctcctcttctttctcctcctcct 130807
>gb|AC152947.1| Mus musculus 10 BAC RP23-12H20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222139 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| |||||||||||||||| | | ||||||||||||| Sbjct: 135204 cctcctcctcctctttctcctcctcctcctcctctttctcctcct 135160
>ref|XM_523416.1| PREDICTED: Pan troglodytes AT-binding transcription factor 1 (LOC468024), mRNA Length = 13500 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||| ||||||||||| ||| |||| |||||||| Sbjct: 964 cctcctcctcttcttcctcctcctcctccgcctcttcctcctcct 920
>ref|XM_466696.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2870 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 329 aagccttccttctgcgcttctttcc 353 ||||||||||||||||||||||||| Sbjct: 2529 aagccttccttctgcgcttctttcc 2505 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 329 aagccttccttctgcgcttcttt 351 ||||||||||||||||||||||| Sbjct: 2589 aagccttccttctgcgcttcttt 2567
>ref|NM_006885.2| Homo sapiens AT-binding transcription factor 1 (ATBF1), mRNA Length = 11893 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||| ||||||||||| ||| |||| |||||||| Sbjct: 2117 cctcctcctcttcttcctcctcctcctccgcctcttcctcctcct 2073
>gb|AC140426.3| Mus musculus BAC clone RP24-98A17 from chromosome 14, complete sequence Length = 189282 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||| ||||||||||||| | |||| |||||||||| Sbjct: 149789 cctcctcctcttccttctcctcctcctcctcttccttctcctcct 149833
>gb|AC145590.3| Mus musculus BAC clone RP24-175D4 from chromosome 19, complete sequence Length = 179063 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||| ||||||||||||| | |||| |||||||||| Sbjct: 107726 cctcctcctcttccttctcctcctcctcctcttccttctcctcct 107682 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| |||| ||||||||||| | |||| |||||||||| Sbjct: 107747 cctcctcctcctcttcctcctcctcctcctcttccttctcctcct 107703
>gb|AC154330.2| Mus musculus BAC clone RP23-286H23 from chromosome 16, complete sequence Length = 203553 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 409 tcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||| ||||||||||| | ||||||||||||||| Sbjct: 10566 tcttcttcctcctcctcctcctcttctttctcctcct 10602 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 10579 cctcctcctcttctttctcctcctcct 10605
>ref|XM_532391.2| PREDICTED: Canis familiaris similar to splicing factor YT521-B isoform 2, transcript variant 1 (LOC475161), mRNA Length = 2931 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||| ||||||||||| | |||||| |||||||| Sbjct: 751 cctcctcctcttcttcctcctcctcctcctcttcttcctcctcct 707
>ref|XM_856293.1| PREDICTED: Canis familiaris similar to splicing factor YT521-B isoform 2, transcript variant 4 (LOC475161), mRNA Length = 2822 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||| ||||||||||| | |||||| |||||||| Sbjct: 586 cctcctcctcttcttcctcctcctcctcctcttcttcctcctcct 542
>ref|XM_856265.1| PREDICTED: Canis familiaris similar to splicing factor YT521-B isoform 2, transcript variant 3 (LOC475161), mRNA Length = 2845 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||| ||||||||||| | |||||| |||||||| Sbjct: 586 cctcctcctcttcttcctcctcctcctcctcttcttcctcctcct 542
>gb|AC002044.1|HUAC002044 Human Chromosome 16 BAC clone CIT987SK-A-418G10, complete sequence Length = 218074 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||| ||||||||||| ||| |||| |||||||| Sbjct: 135786 cctcctcctcttcttcctcctcctcctccgcctcttcctcctcct 135742
>gb|AC125128.3| Mus musculus BAC clone RP24-289N17 from chromosome 14, complete sequence Length = 180645 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||| ||||||||||||| | |||| |||||||||| Sbjct: 27120 cctcctcctcttccttctcctcctcctcctcttccttctcctcct 27164
>gb|AC002078.2| Homo sapiens BAC clone CTB-111H14 from 7, complete sequence Length = 80168 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||||||||| |||||||||||||||| | |||| | |||||||| Sbjct: 61475 cctccgcctcctctttctcctcctcctcctcttcctcctcctcct 61431
>gb|AC133904.9| Mus musculus chromosome 19, clone RP24-143J12, complete sequence Length = 163882 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||| ||||||||||||| | |||| |||||||||| Sbjct: 121485 cctcctcctcttccttctcctcctcctcctcttccttctcctcct 121529 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| |||| ||||||||||| | |||| |||||||||| Sbjct: 121464 cctcctcctcctcttcctcctcctcctcctcttccttctcctcct 121508
>gb|AC158764.4| Mus musculus chromosome 1, clone RP24-248C2, complete sequence Length = 165228 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| |||||||||||||||| | |||||| |||||||| Sbjct: 66122 cctcctcctcctctttctcctcctcctcctcttcttcctcctcct 66166
>gb|AC124918.5| Rattus norvegicus 4 BAC CH230-4H1 (Children's Hospital Oakland Research Institute) complete sequence Length = 228052 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||||||||||||||| | |||| | |||||||| Sbjct: 86267 cctcctcctcttctttctcctcctcctcctcttcctcctcctcct 86223
>emb|AL669825.10| Mouse DNA sequence from clone RP23-327K3 on chromosome 11 Contains a cyclic AMP phosphoprotein (Arpp19) pseudogene, a heat shock protein (Hsp) pseudogene and a ribosomal protein S6 (Rps6) pseudogene, complete sequence Length = 199649 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||| ||||||||||| | | ||||||||||||| Sbjct: 91800 cctcctcctcttcttcctcctcctcctcctcctctttctcctcct 91756 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Minus Query: 398 atgcctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||||||| |||| |||| ||||||||||| | |||||| |||||||| Sbjct: 91824 atgcctcctcctcctcttcctcctcctcctcctcttcttcctcctcct 91777
>gb|AC154365.2| Mus musculus BAC clone RP24-567H4 from chromosome 14, complete sequence Length = 151459 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||| ||||||||||| | |||||| |||||||| Sbjct: 34941 cctcctcctcttcttcctcctcctccttctcttcttcctcctcct 34985
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 329 aagccttccttctgcgcttctttcc 353 ||||||||||||||||||||||||| Sbjct: 24159656 aagccttccttctgcgcttctttcc 24159680 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 329 aagccttccttctgcgcttcttt 351 ||||||||||||||||||||||| Sbjct: 24159596 aagccttccttctgcgcttcttt 24159618
>gb|AC132068.2| Homo sapiens chromosome 16 clone CTD-2326C4, complete sequence Length = 142641 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||| ||||||||||| ||| |||| |||||||| Sbjct: 43911 cctcctcctcttcttcctcctcctcctccgcctcttcctcctcct 43867
>gb|AC027653.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-166J14, complete sequence Length = 174990 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||| ||||||||||| | |||||| |||||||| Sbjct: 91923 cctcctcctcttcttcctcctcctcctcctcttcttcctcctcct 91967
>gb|AC155286.8| Mus musculus 10 BAC RP23-213N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219072 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| |||||||||||||||| | | ||||||||||||| Sbjct: 217666 cctcctcctcctctttctcctcctcctcctcctctttctcctcct 217710
>gb|AC131177.9| Mus musculus chromosome 1, clone RP23-374I10, complete sequence Length = 189761 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| |||||||||||||||| | |||||| |||||||| Sbjct: 128179 cctcctcctcctctttctcctcctcctcctcttcttcctcctcct 128223
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 329 aagccttccttctgcgcttctttcc 353 ||||||||||||||||||||||||| Sbjct: 118397 aagccttccttctgcgcttctttcc 118421 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 329 aagccttccttctgcgcttcttt 351 ||||||||||||||||||||||| Sbjct: 118337 aagccttccttctgcgcttcttt 118359
>dbj|AB118021.1| Oryza sativa (japonica cultivar-group) bip135 mRNA for BRI1-KD interacting protein 135, partial cds Length = 1850 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 329 aagccttccttctgcgcttctttcc 353 ||||||||||||||||||||||||| Sbjct: 1481 aagccttccttctgcgcttctttcc 1457 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 329 aagccttccttctgcgcttcttt 351 ||||||||||||||||||||||| Sbjct: 1541 aagccttccttctgcgcttcttt 1519
>dbj|AK072455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114I24, full insert sequence Length = 2870 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 329 aagccttccttctgcgcttctttcc 353 ||||||||||||||||||||||||| Sbjct: 2529 aagccttccttctgcgcttctttcc 2505 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 329 aagccttccttctgcgcttcttt 351 ||||||||||||||||||||||| Sbjct: 2589 aagccttccttctgcgcttcttt 2567
>gb|AY104489.1| Zea mays PCO108349 mRNA sequence Length = 553 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 329 aagccttccttctgcgcttctttcc 353 ||||||||||||||||||||||||| Sbjct: 197 aagccttccttctgcgcttctttcc 173
>emb|AL731855.19| Mouse DNA sequence from clone RP23-107N13 on chromosome 2, complete sequence Length = 172215 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 416 tctcctcctcctgcgcttctttctcctcctgct 448 |||||||||||| | |||||||||||||||||| Sbjct: 168624 tctcctcctcctcctcttctttctcctcctgct 168656 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcct 424 ||||| |||||||||||||||||| Sbjct: 168630 cctcctcctcttctttctcctcct 168653
>gb|AC122747.11| Mus musculus chromosome 9, clone RP23-217J11, complete sequence Length = 195755 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 412 tctttctcctcctcctgcgcttctttctcctcctgct 448 |||| ||||||||||||| |||||| ||||||||||| Sbjct: 51548 tcttcctcctcctcctgctcttcttcctcctcctgct 51512
>emb|AL845267.2| Mouse DNA sequence from clone RP23-426D2 on chromosome 2, complete sequence Length = 216597 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 412 tctttctcctcctcctgcgcttctttctcctcctgcttctc 452 |||| ||||||||||| | ||||||||||||||| |||||| Sbjct: 120437 tcttcctcctcctcctcctcttctttctcctcctccttctc 120477 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 412 tctttctcctcctcctgcgcttctttctcctcctgcttctc 452 |||| ||||||||||| | ||||||||||||||| |||||| Sbjct: 120329 tcttcctcctcctcctcctcttctttctcctcctccttctc 120369 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 120447 cctcctcctcttctttctcctcctcct 120473 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 120339 cctcctcctcttctttctcctcctcct 120365
>gb|L32832.1|HUMZFHP Homo sapiens zinc finger homeodomain protein (ATBF1-A) mRNA, complete cds Length = 11893 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||| ||||||||||| ||| |||| |||||||| Sbjct: 2117 cctcctcctcttcttcctcctcctcctccgcctcttcctcctcct 2073
>emb|AL626772.10| Mouse DNA sequence from clone RP23-90D4 on chromosome 4, complete sequence Length = 230614 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| |||||||||||||||| | |||||| |||||||| Sbjct: 168116 cctcctcctcctctttctcctcctcctcctcttcttcctcctcct 168072
>emb|AL672005.7| Mouse DNA sequence from clone RP23-401A9 on chromosome X, complete sequence Length = 123180 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||| ||||||||||| | |||| |||||||||| Sbjct: 60140 cctcctcctcttcttcctcctcctcctcctcttccttctcctcct 60184
>gb|AC154844.2| Mus musculus BAC clone RP23-46K13 from chromosome 16, complete sequence Length = 196946 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 417 ctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||||||||||| | |||| ||||||||||||||| Sbjct: 97032 ctcctcctcctgctcctcttcctcctcctgcttctc 96997 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 417 ctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||||||||||| | || | ||||||||||||||| Sbjct: 97191 ctcctcctcctgctcctcctcctcctcctgcttctc 97156 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 417 ctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||||||||||| | || | ||||||||||||||| Sbjct: 97134 ctcctcctcctgctcctcctcctcctcctgcttctc 97099
>gb|AC154227.2| Mus musculus BAC clone RP24-142A23 from chromosome 14, complete sequence Length = 156644 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcc 444 ||||| |||||||| ||| ||||| || |||||||||||||||| Sbjct: 52011 cctccccctcttctgtcttctcctactccgcttctttctcctcc 52054
>gb|AC114613.12| Mus musculus chromosome 5, clone RP24-80F7, complete sequence Length = 190200 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| ||||||||| ||||||||||| | |||||| |||||||| Sbjct: 189349 ctcctcctcttcttcctcctcctcctcctcttcttcctcctcct 189306
>gb|AC153608.10| Mus musculus 6 BAC RP23-79A7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188294 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| |||| |||||||||||| ||| | ||||||||||||||| Sbjct: 40359 ctcctcctcctctttctcctccccctcctcttctttctcctcct 40316 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcct 427 ||||||||||||||||||||| Sbjct: 40333 cctcttctttctcctcctcct 40313
>gb|AC121949.3| Mus musculus BAC clone RP24-215I11 from 18, complete sequence Length = 153426 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||| ||||||||| ||||||||||| | | || |||||||||| |||||| Sbjct: 66772 cctcctcctcttcttcctcctcctcctcctcctccttctcctcctccttctc 66823 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 409 tcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||| ||||||||||| | |||||| |||||||| Sbjct: 66759 tcttcttcctcctcctcctcctcttcttcctcctcct 66795 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 ctcttctttctcctcctcct 427 |||||||||||||||||||| Sbjct: 70976 ctcttctttctcctcctcct 70957
>gb|AC113276.9| Mus musculus chromosome 5, clone RP23-383E21, complete sequence Length = 245002 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| ||||||||| ||||||||||| | |||||| |||||||| Sbjct: 7429 ctcctcctcttcttcctcctcctcctcctcttcttcctcctcct 7386
>emb|AL162576.27| Human DNA sequence from clone RP11-568F20 on chromosome 13 Contains a ubiquitin pseudogene, complete sequence Length = 105783 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Minus Query: 412 tctttctcctcctcctgcgcttctttctcctcctgcttct 451 |||||||||||||||||| |||| | |||||||| ||||| Sbjct: 3360 tctttctcctcctcctgcccttcctcctcctcctccttct 3321
>gb|AC117633.6| Mus musculus, clone RP23-200C8, complete sequence Length = 224221 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||| ||||||||| ||||||||||| | | || |||||||||| |||||| Sbjct: 27924 cctcctcctcttcttcctcctcctcctcctcctccttctcctcctccttctc 27873 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 409 tcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||| ||||||||||| | |||||| |||||||| Sbjct: 27937 tcttcttcctcctcctcctcctcttcttcctcctcct 27901 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 ctcttctttctcctcctcct 427 |||||||||||||||||||| Sbjct: 23720 ctcttctttctcctcctcct 23739
>ref|XM_780957.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC580929 (LOC580929), mRNA Length = 5619 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 413 ctttctcctcctcctgcgcttctt 436 |||||||||||||||||||||||| Sbjct: 705 ctttctcctcctcctgcgcttctt 682
>gb|AC153839.10| Mus musculus 6 BAC RP23-93A21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 225351 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 417 ctcctcctcctgcgcttctttctcctcctgct 448 ||||||||||||| |||| ||||||||||||| Sbjct: 32069 ctcctcctcctgctcttccttctcctcctgct 32038 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 417 ctcctcctcctgcgcttctttctcctcctgct 448 ||||||||||||| | || ||||||||||||| Sbjct: 32687 ctcctcctcctgctcctccttctcctcctgct 32656
>gb|AC153993.23| Mus musculus 6 BAC RP24-568N16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 188187 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 417 ctcctcctcctgcgcttctttctcctcctgct 448 ||||||||||||| |||| ||||||||||||| Sbjct: 83771 ctcctcctcctgctcttccttctcctcctgct 83740 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 417 ctcctcctcctgcgcttctttctcctcctgct 448 ||||||||||||| | || ||||||||||||| Sbjct: 83404 ctcctcctcctgctcctccttctcctcctgct 83373
>emb|AL645760.15| Mouse DNA sequence from clone DN-262D11 on chromosome 3 Contains the 5' end of the Man1b gene for mannosidase 1 beta, a pseudogene similar to arylsulfatase A (Arsa) and a CpG island, complete sequence Length = 135825 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttctct 453 |||| ||||||| || |||||||| | | ||||||||||||||| ||||||| Sbjct: 71770 ctcctcctcttccttttcctcctctttctcttctttctcctccttcttctct 71719
>gb|AC126616.4| Homo sapiens 12 BAC RP11-149L3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 14790 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 409 tcttctttctcctcctcctgcgcttctttctcctcctgct 448 ||||||| ||||||||||||| |||| | ||||||||||| Sbjct: 12520 tcttcttcctcctcctcctgctcttcctcctcctcctgct 12559
>emb|AL606744.30| Mouse DNA sequence from clone RP23-267O21 on chromosome 3, complete sequence Length = 185867 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttctct 453 |||| ||||||| || |||||||| | | ||||||||||||||| ||||||| Sbjct: 40941 ctcctcctcttccttttcctcctctttctcttctttctcctccttcttctct 40890
>dbj|AK019896.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330415L19 product:inversin, full insert sequence Length = 474 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 409 tcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||||||||||||||||| | |||| | |||||||| |||||| Sbjct: 243 tcttctttctcctcctcctcctcttcctcctcctccttcttctc 200
>gb|AC167565.1| Mus musculus BAC clone RP24-84D8 from chromosome 14, complete sequence Length = 199101 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| |||| |||||||||||||||| | | ||||||||||||| Sbjct: 60668 ctcctcctcctctttctcctcctcctcctcctctttctcctcct 60711 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcct 427 |||| ||||||||||||||||||||| Sbjct: 60982 ctcctcctcttctttctcctcctcct 61007
>emb|BX510363.7| Mouse DNA sequence from clone RP23-379M10 on chromosome 4, complete sequence Length = 29470 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 409 tcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||||||||||||||||| | |||| | |||||||| |||||| Sbjct: 20813 tcttctttctcctcctcctcctcttcctcctcctccttcttctc 20770
>gb|AC170597.2| Mus musculus BAC clone RP23-391A19 from chromosome 13, complete sequence Length = 223662 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcctg 446 ||||||||| ||||||||||| | |||||| ||||||||| Sbjct: 163826 cctcttcttcctcctcctcctcctcttcttcctcctcctg 163787
>emb|AL831741.16| Mouse DNA sequence from clone RP23-337N2 on chromosome 4, complete sequence Length = 213347 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 409 tcttctttctcctcctcctgcgcttctttctcctcc 444 ||||||| ||||||||||| | |||||||||||||| Sbjct: 37479 tcttcttcctcctcctcctcctcttctttctcctcc 37514
>emb|CT025618.6| Mouse DNA sequence from clone RP24-268L19 on chromosome 14, complete sequence Length = 139312 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcc 444 ||||| |||||||| ||| ||||| || |||||||||||||||| Sbjct: 30678 cctccccctcttctgtcttctcctactccgcttctttctcctcc 30635
>gb|AC118646.23| Mus musculus chromosome 15, clone RP24-116A18, complete sequence Length = 205272 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 13690 cctcctcctcttctttctcctcctcct 13716
>gb|AC165226.3| Sorex araneus, clone XX-26483857F19, complete sequence Length = 39750 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 410 cttctttctcctcctcctgcgcttctttctc 440 |||||||||||||||||| | |||||||||| Sbjct: 4791 cttctttctcctcctcctcctcttctttctc 4761
>gb|AC159810.2| Mus musculus BAC clone RP24-94A19 from chromosome 9, complete sequence Length = 168537 Score = 46.1 bits (23), Expect = 0.099 Identities = 40/45 (88%), Gaps = 3/45 (6%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||||||| ||||||| ||||||||||||||| Sbjct: 42009 cctcctcctcttctttctcttcctcct---cttctttctcctcct 42050 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcct 427 ||||||||||||||||||||| Sbjct: 42033 cctcttctttctcctcctcct 42053 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctt 436 ||||| ||||||||| ||||||||||| | |||||| Sbjct: 55327 cctcctcctcttcttcctcctcctcctcctcttctt 55362 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctttctcct 442 ||||||||||||| ||||||| | |||||| ||||| Sbjct: 42117 cctcttctttctcttcctcctcctcttcttcctcct 42152
>gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, complete sequence Length = 182534 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 150177 cctcctcctcttctttctcctcctcct 150151 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcc 441 ||||| ||||||||||||||| ||||| | | ||||||||| Sbjct: 150384 cctcctcctcttctttctccttctcctcctcctctttctcc 150344 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| |||||||||||||||| | ||| |||||||||| Sbjct: 150243 cctcctcctcctctttctcctcctcctcctctttcttctcctcct 150199 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| ||||||||| |||||| | | ||||||||||||| Sbjct: 150159 cctcctcctcctctttctccccctcctcctcctctttctcctcct 150115 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| |||||||||||||||| | ||| |||||||||| Sbjct: 150120 cctcctcctcctctttctcctcctcctcctctttcttctcctcct 150076 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| |||| ||||||||| |||||| | | ||||||||||||| Sbjct: 150362 ctcctcctcctctttctccccctcctcctcctctttctcctcct 150319 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| |||| |||||||||||||||| | ||| |||||||||| Sbjct: 150083 ctcctcctcctctttctcctcctcctcctctttcttctcctcct 150040 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| |||| |||||||||||||||| | ||| |||||||||| Sbjct: 150047 ctcctcctcctctttctcctcctcctcctctttcttctcctcct 150004 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| |||| |||||||||||||||| | ||| |||||||||| Sbjct: 150011 ctcctcctcctctttctcctcctcctcctctttcttctcctcct 149968
>ref|XM_864215.1| PREDICTED: Bos taurus similar to splicing factor YT521-B isoform 2, transcript variant 2 (LOC613858), mRNA Length = 3825 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||||| ||||||||||| | |||||| |||||||| Sbjct: 1088 cctcttcttcctcctcctcctcctcttcttcctcctcct 1050
>gb|AC102745.10| Mus musculus chromosome 17, clone RP24-371L2, complete sequence Length = 189211 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 77376 cctcctcctcttctttctcctcctcct 77350
>gb|AC132278.3| Mus musculus BAC clone RP24-346C20 from chromosome 8, complete sequence Length = 154524 Score = 46.1 bits (23), Expect = 0.099 Identities = 38/43 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctc 443 ||||| ||||||||| ||||||||||| | |||||| |||||| Sbjct: 24730 cctcctcctcttcttcctcctcctccttctcttcttcctcctc 24688
>gb|AC134553.5| Mus musculus BAC clone RP24-280H19 from chromosome 12, complete sequence Length = 168895 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 149456 cctcctcctcttctttctcctcctcct 149430 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 418 tcctcctcctgcgcttctttctcctcct 445 |||||||||| | ||||||||||||||| Sbjct: 149460 tcctcctcctcctcttctttctcctcct 149433
>gb|AC134610.5| Mus musculus BAC clone RP23-79B24 from chromosome 13, complete sequence Length = 235557 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||| |||||||| |||| | ||||||||||||||| Sbjct: 209492 cctcttccttctcctcttcctcctcttctttctcctcct 209530
>gb|AC124433.4| Mus musculus BAC clone RP24-248P14 from chromosome 13, complete sequence Length = 169876 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 82395 cctcctcctcttctttctcctcctcct 82421 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 420 ctcctcctgcgcttctttctcctcctgcttctc 452 |||||||| | ||||||||||||||| |||||| Sbjct: 82393 ctcctcctcctcttctttctcctcctccttctc 82425
>gb|AC125186.6| Mus musculus BAC clone RP23-302C16 from chromosome 1, complete sequence Length = 192042 Score = 46.1 bits (23), Expect = 0.099 Identities = 38/43 (88%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctc 443 ||||| ||||||||| ||||||||||| | |||||| |||||| Sbjct: 165267 cctcctcctcttcttcctcctcctcctcctcttcttcctcctc 165309
>gb|AC034116.10| Mus musculus chromosome 16, clone RP23-428P5, complete sequence Length = 210023 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 67309 cctcctcctcttctttctcctcctcct 67283 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 418 tcctcctcctgcgcttctttctcctcctgcttctc 452 |||||||||| | ||||||||||||||| |||||| Sbjct: 67313 tcctcctcctcctcttctttctcctcctccttctc 67279
>gb|AC128670.3| Mus musculus BAC clone RP23-137H4 from chromosome 13, complete sequence Length = 173020 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||| | ||||||||||| | ||||||||||||||| Sbjct: 96708 cctcttcctcctcctcctccttctcttctttctcctcct 96670 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 ctcttctttctcctcctcct 427 |||||||||||||||||||| Sbjct: 96686 ctcttctttctcctcctcct 96667
>gb|AC124600.5| Mus musculus BAC clone RP23-25H7 from chromosome 16, complete sequence Length = 225102 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 150877 cctcctcctcttctttctcctcctcct 150851
>gb|DQ483833.1| Gymnogyps californianus clone 256F microsatellite sequence Length = 1251 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 408 ctcttctttctcctcctcctgcgcttc 434 |||||||||||||||||||| |||||| Sbjct: 1075 ctcttctttctcctcctcctccgcttc 1049
>gb|DQ483777.1| Gymnogyps californianus clone 200F microsatellite sequence Length = 382 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||||||||||||| ||||||||||| Sbjct: 178 cctccgcctcttcttcctcctcctcct 152
>gb|DQ483505.1| Gymnogyps californianus clone 64D microsatellite sequence Length = 567 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgc 429 ||||||||||||||||||||||| Sbjct: 474 cctcttctttctcctcctcctgc 496
>gb|DQ484017.1| Gymnogyps californianus clone 183G microsatellite sequence Length = 1142 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||||||||||||| ||||||||||| Sbjct: 648 cctccgcctcttcttcctcctcctcct 622
>gb|DQ484006.1| Gymnogyps californianus clone 172G microsatellite sequence Length = 686 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgc 429 ||||||||||||||||||||||| Sbjct: 210 cctcttctttctcctcctcctgc 188
>gb|AC127683.10| Mus musculus BAC clone RP24-171F12 from chromosome 7, complete sequence Length = 158570 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 64761 cctcctcctcttctttctcctcctcct 64787
>gb|AC121581.3| Mus musculus BAC clone RP23-256O22 from chromosome 3, complete sequence Length = 159314 Score = 46.1 bits (23), Expect = 0.099 Identities = 41/47 (87%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcctgct 448 |||| ||||||||| ||||||||||| | | |||| ||||||||||| Sbjct: 91044 ctcctcctcttcttcctcctcctcctcctcctcttcctcctcctgct 90998
>gb|AC122267.4| Mus musculus BAC clone RP23-214H6 from 8, complete sequence Length = 214619 Score = 46.1 bits (23), Expect = 0.099 Identities = 38/43 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctc 443 ||||| ||||||||| ||||||||||| | |||||| |||||| Sbjct: 202480 cctcctcctcttcttcctcctcctccttctcttcttcctcctc 202438
>gb|AC125229.3| Mus musculus BAC clone RP23-45P1 from 5, complete sequence Length = 167771 Score = 46.1 bits (23), Expect = 0.099 Identities = 40/45 (88%), Gaps = 3/45 (6%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||| ||||||||||| ||||||||||||||| Sbjct: 25629 cctcctcctcttcttcctcctcctcct---cttctttctcctcct 25588 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctc 425 ||||| ||||||||||||||||||| Sbjct: 25611 cctcctcctcttctttctcctcctc 25587
>gb|AC107750.9| Mus musculus chromosome 13, clone RP23-249C3, complete sequence Length = 220740 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||| |||||||| |||| | ||||||||||||||| Sbjct: 97612 cctcttccttctcctcttcctcctcttctttctcctcct 97574
>gb|AC119242.5| Mus musculus chromosome 6, clone RP24-229C13, complete sequence Length = 189108 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 65999 cctcctcctcttctttctcctcctcct 65973
>gb|AC084821.26| Mus musculus strain C57BL/6J clone rp23-395h6 map 1, complete sequence Length = 211776 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 169205 cctcctcctcttctttctcctcctcct 169179
>emb|Z83846.1|HS415G2 Human DNA sequence from clone CTA-415G2 on chromosome 22 Contains the 5' end of the SYN3 gene for Synapsin III, a novel pseudogene and a CpG island, complete sequence Length = 129957 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 82443 cctcctcctcttctttctcctcctcct 82469 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 417 ctcctcctcctgcgcttctttctcctcct 445 ||||||||||| | ||||||||||||||| Sbjct: 82438 ctcctcctcctcctcttctttctcctcct 82466
>gb|BC114069.1| Bos taurus similar to splicing factor YT521-B isoform 2, mRNA (cDNA clone MGC:137509 IMAGE:8168593), complete cds Length = 3205 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||||| ||||||||||| | |||||| |||||||| Sbjct: 948 cctcttcttcctcctcctcctcctcttcttcctcctcct 910
>emb|AL683871.15| Human DNA sequence from clone RP13-76L22 on chromosome X, complete sequence Length = 175765 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 415 ttctcctcctcctgcgcttctttctcctcct 445 ||||||||||||| | ||||||||||||||| Sbjct: 93604 ttctcctcctcctcctcttctttctcctcct 93634 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctc 425 ||||| ||||||||||||||||||| Sbjct: 93709 cctcctcctcttctttctcctcctc 93733 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 417 ctcctcctcctgcgcttctttctcctcct 445 ||||||||||| | ||||||||||||||| Sbjct: 93704 ctcctcctcctcctcttctttctcctcct 93732 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctc 425 ||||| ||||||||||||||||||| Sbjct: 93611 cctcctcctcttctttctcctcctc 93635
>gb|AC105180.8| Homo sapiens chromosome 8, clone RP11-345J1, complete sequence Length = 174617 Score = 46.1 bits (23), Expect = 0.099 Identities = 44/51 (86%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 |||| |||| || ||||||||||||| | | ||||||||||||| |||||| Sbjct: 133777 ctcctcctcctccttctcctcctccttctcctctttctcctcctccttctc 133827
>gb|AC091616.2| Rattus norvegicus strain Brown Norway clone RP31-153J8, complete sequence Length = 125026 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 77273 cctcctcctcttctttctcctcctcct 77247 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| || ||||||||||||| |||||| | |||||||| Sbjct: 77234 cctcctcctcctccttctcctcctcctccgcttcctcctcctcct 77190
>gb|AC158567.3| Mus musculus chromosome 15, clone RP24-93F2, complete sequence Length = 188718 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 127337 cctcctcctcttctttctcctcctcct 127311 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcc 441 ||||| ||||||||||||||| ||||| | | ||||||||| Sbjct: 127544 cctcctcctcttctttctccttctcctcctcctctttctcc 127504 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| |||||||||||||||| | ||| |||||||||| Sbjct: 127403 cctcctcctcctctttctcctcctcctcctctttcttctcctcct 127359 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| ||||||||| |||||| | | ||||||||||||| Sbjct: 127319 cctcctcctcctctttctccccctcctcctcctctttctcctcct 127275 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| |||||||||||||||| | ||| |||||||||| Sbjct: 127280 cctcctcctcctctttctcctcctcctcctctttcttctcctcct 127236 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| |||| ||||||||| |||||| | | ||||||||||||| Sbjct: 127522 ctcctcctcctctttctccccctcctcctcctctttctcctcct 127479 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| |||| |||||||||||||||| | ||| |||||||||| Sbjct: 127243 ctcctcctcctctttctcctcctcctcctctttcttctcctcct 127200 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| |||| |||||||||||||||| | ||| |||||||||| Sbjct: 127207 ctcctcctcctctttctcctcctcctcctctttcttctcctcct 127164 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| |||| |||||||||||||||| | ||| |||||||||| Sbjct: 127171 ctcctcctcctctttctcctcctcctcctctttcttctcctcct 127128
>gb|AC154872.10| Mus musculus chromosome 1, clone RP23-393C3, complete sequence Length = 193086 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 418 tcctcctcctgcgcttctttctcctcctgct 448 |||||||||||| |||||| ||||||||||| Sbjct: 130671 tcctcctcctgctcttcttcctcctcctgct 130641
>gb|AC165262.2| Mus musculus BAC clone RP23-89H5 from chromosome 14, complete sequence Length = 201412 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 171143 cctcctcctcttctttctcctcctcct 171169 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 417 ctcctcctcctgcgcttctttctcctcct 445 ||||||||||| | ||||||||||||||| Sbjct: 171138 ctcctcctcctcctcttctttctcctcct 171166
>gb|AC159091.2| Mus musculus chromosome 15, clone RP24-283J18, complete sequence Length = 65063 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 24954 cctcctcctcttctttctcctcctcct 24980 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 418 tcctcctcctgcgcttctttctcctcct 445 |||||||||| | ||||||||||||||| Sbjct: 24950 tcctcctcctcctcttctttctcctcct 24977
>gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 243990 Score = 46.1 bits (23), Expect = 0.099 Identities = 34/37 (91%), Gaps = 3/37 (8%) Strand = Plus / Plus Query: 409 tcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||||||||||||||| ||||||||||||||| Sbjct: 198149 tcttctttctcctcctcct---cttctttctcctcct 198182 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctc 425 ||||| ||||||||||||||||||| Sbjct: 198159 cctcctcctcttctttctcctcctc 198183
>emb|AL646046.8| Mouse DNA sequence from clone RP23-101M12 on chromosome 11, complete sequence Length = 214665 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 191721 cctcctcctcttctttctcctcctcct 191747
>gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, complete sequence Length = 179145 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 117214 cctcctcctcttctttctcctcctcct 117240 Score = 44.1 bits (22), Expect = 0.39 Identities = 45/52 (86%), Gaps = 3/52 (5%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||| |||| || ||||||||||||| ||||||||||||||| |||||| Sbjct: 117196 cctcctcctcctccttctcctcctcct---cttctttctcctcctccttctc 117244 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 tctttctcctcctcctgcgcttctttctc 440 |||||||||||||||| | |||||||||| Sbjct: 116126 tctttctcctcctccttctcttctttctc 116154
>dbj|AK135093.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430584I17 product:Potassium channel KCNH3 (Fragment) homolog [Mus musculus], full insert sequence Length = 3226 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 640 cctcctcctcttctttctcctcctcct 666
>gb|AC067854.14| Homo sapiens chromosome 8, clone RP11-513H8, complete sequence Length = 203982 Score = 46.1 bits (23), Expect = 0.099 Identities = 44/51 (86%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 |||| |||| || ||||||||||||| | | ||||||||||||| |||||| Sbjct: 16479 ctcctcctcctccttctcctcctccttctcctctttctcctcctccttctc 16529
>gb|S80994.1| MLC-2=myosin light chain 2 {promoter} [rats, Wistar-Kyoto, spontaneously hypertensive, Genomic, 1964 nt] Length = 1964 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 1636 cctcctcctcttctttctcctcctcct 1662
>gb|AC152959.2| Mus musculus 6 BAC RP23-78B5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206857 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 205149 cctcctcctcttctttctcctcctcct 205123
>gb|AC148708.1| Macaca mulatta Major Histocompatibility Complex BAC MMU387P10, complete sequence Length = 176807 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 138186 cctcctcctcttctttctcctcctcct 138212 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 415 ttctcctcctcctgcgcttctttctcctcct 445 ||||||||||||| | ||||||||||||||| Sbjct: 138179 ttctcctcctcctcctcttctttctcctcct 138209
>dbj|AK021149.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030044P22 product:unclassifiable, full insert sequence Length = 1080 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 32 cctcctcctcttctttctcctcctcct 58
>gb|AC148676.1| Macaca mulatta Major Histocompatibility Complex BAC MMU118H05, complete sequence Length = 155090 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 856 cctcctcctcttctttctcctcctcct 882 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 415 ttctcctcctcctgcgcttctttctcctcct 445 ||||||||||||| | ||||||||||||||| Sbjct: 849 ttctcctcctcctcctcttctttctcctcct 879
>gb|AC148671.1| Macaca mulatta Major Histocompatibility Complex BAC MMU065H09, complete sequence Length = 177726 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 123605 cctcctcctcttctttctcctcctcct 123631 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 415 ttctcctcctcctgcgcttctttctcctcct 445 ||||||||||||| | ||||||||||||||| Sbjct: 123598 ttctcctcctcctcctcttctttctcctcct 123628
>gb|AC148668.1| Macaca mulatta Major Histocompatibility Complex BAC MMU038L02, complete sequence Length = 168263 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 35021 cctcctcctcttctttctcctcctcct 35047 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 415 ttctcctcctcctgcgcttctttctcctcct 445 ||||||||||||| | ||||||||||||||| Sbjct: 35014 ttctcctcctcctcctcttctttctcctcct 35044
>gb|AC153576.3| Mus musculus 6 BAC RP23-330J17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215953 Score = 46.1 bits (23), Expect = 0.099 Identities = 34/37 (91%), Gaps = 3/37 (8%) Strand = Plus / Minus Query: 409 tcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||||||||||||||| ||||||||||||||| Sbjct: 159540 tcttctttctcctcctcct---cttctttctcctcct 159507 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctc 425 ||||| ||||||||||||||||||| Sbjct: 159530 cctcctcctcttctttctcctcctc 159506
>gb|AC109506.21| Mus musculus chromosome 7, clone RP23-344G21, complete sequence Length = 227676 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 225510 cctcctcctcttctttctcctcctcct 225536
>gb|AF133300.2|AF133300 Mus musculus MOR 3'Beta1, MOR 3'Beta2, MOR 3'Beta3, and MOR 3'Beta4 genes, complete cds; Cbx3 pseudogene, complete sequence; and MOR 3'Beta5 and MOR 3'Beta6 genes, complete cds Length = 92000 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttct 439 ||||| ||||||||| ||||||||||| | ||||||||| Sbjct: 57068 cctcctcctcttcttcctcctcctcctcctcttctttct 57106
>gb|AC010885.8| Homo sapiens BAC clone RP11-368K23 from 2, complete sequence Length = 177385 Score = 46.1 bits (23), Expect = 0.099 Identities = 44/51 (86%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttct 451 ||||| |||| |||||||||||||||| | |||| | |||||||| ||||| Sbjct: 6134 cctcctcctcctctttctcctcctcctcctcttcctcctcctccttcttct 6184
>gb|AC012451.8| Homo sapiens BAC clone RP11-414K19 from 2, complete sequence Length = 188121 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 184309 cctcctcctcttctttctcctcctcct 184335
>ref|XM_214555.3| PREDICTED: Rattus norvegicus similar to DD1 (predicted) (LOC291580), mRNA Length = 931 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 |||| |||||||||||||||| | |||||| |||||||| Sbjct: 885 cctcctctttctcctcctcctcctcttcttcctcctcct 923
>ref|XM_223981.3| PREDICTED: Rattus norvegicus suppressor of Ty 16 homolog (S. cerevisiae) (predicted) (Supt16h_predicted), mRNA Length = 4689 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 |||||||||| |||||||||||||||| Sbjct: 1639 cctccgcctcatctttctcctcctcct 1613
>gb|AC154206.2| Mus musculus BAC clone RP24-104P20 from 14, complete sequence Length = 167116 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 61875 cctcctcctcttctttctcctcctcct 61849 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 417 ctcctcctcctgcgcttctttctcctcct 445 ||||||||||| | ||||||||||||||| Sbjct: 61880 ctcctcctcctcctcttctttctcctcct 61852
>gb|AC140442.4| Mus musculus BAC clone RP24-106P1 from 12, complete sequence Length = 153574 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 124559 cctcctcctcttctttctcctcctcct 124585 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 418 tcctcctcctgcgcttctttctcctcct 445 |||||||||| | ||||||||||||||| Sbjct: 124555 tcctcctcctcctcttctttctcctcct 124582 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 417 ctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||||||||| | |||| |||||||||| |||||| Sbjct: 72984 ctcctcctccttctcttccttctcctcctccttctc 73019
>emb|CT033750.18| Mouse DNA sequence from clone RP23-263M5 on chromosome 17, complete sequence Length = 268616 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||||||||||||||||| |||||| |||||||| Sbjct: 76600 cctcttctttctcctcctcctcttcttcttcctcctcct 76562
>emb|AL772135.14| Mouse DNA sequence from clone RP23-162G11 on chromosome 2, complete sequence Length = 230161 Score = 46.1 bits (23), Expect = 0.099 Identities = 34/37 (91%), Gaps = 3/37 (8%) Strand = Plus / Plus Query: 412 tctttctcctcctcctgcgcttctttctcctcctgct 448 |||||||||||||||||| |||||||||||||||| Sbjct: 194434 tctttctcctcctcctgc---tctttctcctcctgct 194467 Score = 40.1 bits (20), Expect = 6.1 Identities = 31/34 (91%), Gaps = 3/34 (8%) Strand = Plus / Plus Query: 412 tctttctcctcctcctgcgcttctttctcctcct 445 |||||||||||||||||| ||||||||||||| Sbjct: 194485 tctttctcctcctcctgc---tctttctcctcct 194515
>gb|AC161198.5| Mus musculus chromosome 15, clone RP23-34E23, complete sequence Length = 237801 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 152358 cctcctcctcttctttctcctcctcct 152384
>gb|AC142106.4| Mus musculus BAC clone RP24-180L10 from 1, complete sequence Length = 194634 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 120125 cctcctcctcttctttctcctcctcct 120151
>emb|AL929498.11| Mouse DNA sequence from clone RP23-438L23 on chromosome 2, complete sequence Length = 98968 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 72873 cctccccctcttctttctcctcctcct 72847
>emb|AL807247.10| Mouse DNA sequence from clone RP23-178D3 on chromosome 4, complete sequence Length = 184686 Score = 46.1 bits (23), Expect = 0.099 Identities = 44/51 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttct 451 ||||| |||| |||| ||||||||||| | |||||| |||||||| ||||| Sbjct: 113067 cctcctcctcctcttcctcctcctcctcctcttcttcctcctcctccttct 113017
>emb|AL929166.7| Mouse DNA sequence from clone RP23-323D9 on chromosome 2, complete sequence Length = 130808 Score = 46.1 bits (23), Expect = 0.099 Identities = 40/45 (88%), Gaps = 3/45 (6%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||||| ||||||||||| ||||||||||||||| Sbjct: 41991 cctcctcctcttcttcctcctcctcct---cttctttctcctcct 41950 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctc 425 ||||| ||||||||||||||||||| Sbjct: 41973 cctcctcctcttctttctcctcctc 41949
>gb|AC163497.14| Mus musculus chromosome 1, clone RP24-185N14, complete sequence Length = 116121 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 43974 cctcctcctcttctttctcctcctcct 43948
>gb|AC153640.6| Mus musculus 6 BAC RP23-230A2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208897 Score = 46.1 bits (23), Expect = 0.099 Identities = 44/51 (86%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 |||| ||||||| ||||||||||||| | | || |||||||||| |||||| Sbjct: 134753 ctcctcctcttccttctcctcctcctcctcctccttctcctcctccttctc 134803 Score = 46.1 bits (23), Expect = 0.099 Identities = 44/51 (86%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 |||| ||||||| ||||||||||||| | | || |||||||||| |||||| Sbjct: 108541 ctcctcctcttccttctcctcctcctcctcctccttctcctcctccttctc 108591
>emb|AL611963.24| Mouse DNA sequence from clone RP23-79J18 on chromosome 4, complete sequence Length = 222196 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 119969 cctcctcctcttctttctcctcctcct 119995
>emb|AL626765.22| Mouse DNA sequence from clone RP23-179N14 on chromosome 19, complete sequence Length = 206196 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 92022 cctcctcctcttctttctcctcctcct 92048 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 417 ctcctcctcctgcgcttctttctcctcct 445 ||||||||||| | ||||||||||||||| Sbjct: 92017 ctcctcctcctcctcttctttctcctcct 92045
>gb|U26708.1|RNU26708 Rattus norvegicus cardiac myosin light chain 2 (MLC2) gene, promoter region Length = 1980 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 1636 cctcctcctcttctttctcctcctcct 1662
>emb|AL928818.8| Mouse DNA sequence from clone RP23-309M6 on chromosome 2, complete sequence Length = 69399 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Minus Query: 399 tgcctccgcctcttctttctcctcctcctgc 429 ||||||| ||||||||| ||||||||||||| Sbjct: 6948 tgcctcctcctcttcttcctcctcctcctgc 6918
>gb|M30298.1|RATMLCB1 Rat cardiac myosin light chain 2 (MLC-2) gene, exon 1 Length = 549 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 152 cctcctcctcttctttctcctcctcct 178
>dbj|AP002993.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-456I15, complete sequences Length = 154839 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 154061 cctcctcctcttctttctcctcctcct 154035 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 418 tcctcctcctgcgcttctttctcctcct 445 |||||||||| | ||||||||||||||| Sbjct: 154065 tcctcctcctcctcttctttctcctcct 154038
>emb|AL603664.16| Mouse DNA sequence from clone RP23-247J12 on chromosome 11, complete sequence Length = 158098 Score = 46.1 bits (23), Expect = 0.099 Identities = 35/39 (89%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 |||||||||||||||||||| ||||||||||||||| Sbjct: 19284 cctcttctttctcctcctccacttcttctttctcctcct 19246
>dbj|AP002770.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-707G14, complete sequences Length = 192961 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcct 427 ||||| ||||||||||||||||||||| Sbjct: 8098 cctcctcctcttctttctcctcctcct 8072 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| ||||||| ||||||||||||| |||||| |||||||| Sbjct: 8065 cctcctcctcttccttctcctcctcctcttcttcttcctcctcct 8021 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 418 tcctcctcctgcgcttctttctcctcct 445 |||||||||| | ||||||||||||||| Sbjct: 8102 tcctcctcctcctcttctttctcctcct 8075
>gb|AC126539.9| Mus musculus chromosome 8, clone RP24-112G5, complete sequence Length = 158710 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 408 ctcttctttctcctcctcctgcgcttctttctcctcct 445 |||||| ||||||||||||| | |||| |||||||||| Sbjct: 84143 ctcttccttctcctcctcctccccttccttctcctcct 84106
>ref|NM_180364.2| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> AT3G53570 (AFC1) transcript variant AT3G53570.1 mRNA, complete cds Length = 1887 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcct 427 |||||||||||||| ||||||||||| Sbjct: 508 ctccgcctcttcttcctcctcctcct 533
>ref|NM_202696.1| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> AT3G53570 (AFC1) transcript variant AT3G53570.3 mRNA, complete cds Length = 1659 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcct 427 |||||||||||||| ||||||||||| Sbjct: 280 ctccgcctcttcttcctcctcctcct 305
>ref|NM_115217.1| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> AT3G53570 (AFC1) transcript variant AT3G53570.2 mRNA, complete cds Length = 1732 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcct 427 |||||||||||||| ||||||||||| Sbjct: 306 ctccgcctcttcttcctcctcctcct 331
>ref|NM_001035776.1| Arabidopsis thaliana AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-ty> AT3G53570 (AFC1) transcript variant AT3G53570.4 mRNA, complete cds Length = 1847 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcct 427 |||||||||||||| ||||||||||| Sbjct: 307 ctccgcctcttcttcctcctcctcct 332
>gb|AC158391.2| Mus musculus BAC clone RP23-441C8 from chromosome 17, complete sequence Length = 203548 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 415 ttctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||||||||||| | |||| |||||||||| |||||| Sbjct: 77734 ttctcctcctcctcctcttccttctcctcctccttctc 77697
>ref|NM_177732.2| Mus musculus solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 (Slc35d1), mRNA Length = 2894 Score = 44.1 bits (22), Expect = 0.39 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgc-ttctttctcctcctgcttct 451 |||| |||||||||||||||| | | ||||||||||| |||||||| Sbjct: 1462 cctcctctttctcctcctccttctccttctttctccttctgcttct 1507
>gb|AC162447.5| Mus musculus chromosome 1, clone RP24-84B18, complete sequence Length = 217720 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcct 427 |||| ||||||||||||||||||||| Sbjct: 40791 ctcctcctcttctttctcctcctcct 40766
>gb|AC133514.4| Mus musculus BAC clone RP23-212F6 from chromosome 5, complete sequence Length = 208083 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctt 436 ||||||| ||||||||||||||| |||||| Sbjct: 176731 cctcttccttctcctcctcctgctcttctt 176702
>gb|AC132255.3| Mus musculus BAC clone RP24-472I15 from chromosome 5, complete sequence Length = 168528 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 |||| |||| ||||||||| ||| | ||||||||||||| |||||| Sbjct: 140980 cctcctcttcctcctcctcatgctcctctttctcctcctccttctc 141025
>gb|AC122354.4| Mus musculus BAC clone RP23-401A2 from chromosome 12, complete sequence Length = 192581 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcctgct 448 |||| ||||||||||||| || | |||||| ||||||||||| Sbjct: 126953 cctcctctttctcctcctgctcctcttcttcctcctcctgct 126912
>ref|XM_858640.1| PREDICTED: Canis familiaris hypothetical protein LOC609143 (LOC609143), mRNA Length = 258 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||||| ||||||||||||| | | |||| |||||||| |||||| Sbjct: 154 cctcttccttctcctcctcctcctcctcttcctcctcctccttctc 109
>gb|AC121939.3| Mus musculus BAC clone RP24-208M2 from chromosome 2, complete sequence Length = 153093 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttc 450 ||||| |||| |||| ||||||||||| | |||||| |||||||| |||| Sbjct: 59237 cctcctcctcctcttcctcctcctcctcctcttcttcctcctcctccttc 59188
>gb|AC123861.4| Mus musculus BAC clone RP23-351E20 from chromosome 2, complete sequence Length = 198454 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||||| ||||||||||||| |||| |||||||||| |||||| Sbjct: 6937 cctcttccttctcctcctcctcttcttccttctcctcctccttctc 6982
>gb|AC124170.3| Mus musculus BAC clone RP23-155H5 from 8, complete sequence Length = 235023 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcc 426 ||||| |||||||||||||||||||| Sbjct: 181402 cctcctcctcttctttctcctcctcc 181427
>emb|CR933563.5| Wallaby DNA sequence from clone MEKBa-325O12, complete sequence Length = 179531 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 412 tctttctcctcctcctgcgcttctttctcctcct 445 |||||||||| ||||| | ||||||||||||||| Sbjct: 87930 tctttctccttctccttcccttctttctcctcct 87897
>emb|CR933541.6| Mouse DNA sequence from clone DN-97M20 on chromosome 11, complete sequence Length = 176646 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Minus Query: 412 tctttctcctcctcctgcgcttctttctcctcctgcttctct 453 |||| ||||||||||| | |||||| |||||||| ||||||| Sbjct: 62486 tcttcctcctcctcctcctcttcttcctcctcctccttctct 62445 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctc 440 ||||| ||||||||| ||||||||||| | |||| ||||| Sbjct: 62476 cctcctcctcttcttcctcctcctccttctcttccttctc 62437
>gb|AC122926.2| Mus musculus BAC clone RP23-10E15 from 6, complete sequence Length = 193055 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 415 ttctcctcctcctgcgcttctttctcctcctgct 448 ||||||||||||||| |||| | ||||||||||| Sbjct: 7371 ttctcctcctcctgctcttcctactcctcctgct 7338
>gb|AC125347.2| Mus musculus BAC clone RP24-136B2 from 5, complete sequence Length = 130354 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctt 436 ||||||| ||||||||||||||| |||||| Sbjct: 12353 cctcttccttctcctcctcctgctcttctt 12324
>gb|AC146218.2| Pan troglodytes BAC clone CH251-267E2 from Y, complete sequence Length = 203014 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttct 451 |||| |||| |||||||||||||||| | |||| | |||||||| ||||| Sbjct: 177117 ctcctcctcctctttctcctcctcctcctcttcctcctcctcctccttct 177166 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 409 tcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||||||||||||| | | |||||||||||||| Sbjct: 177455 tcttctttctcctcctcatccttttctttctcctcct 177491
>gb|AC102790.7| Mus musculus chromosome 19, clone RP23-321D22, complete sequence Length = 242249 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctt 436 ||||||||||||||||||||| | |||||| Sbjct: 127484 cctcttctttctcctcctcctcctcttctt 127513
>gb|AC145574.5| Mus musculus BAC clone RP24-411C16 from chromosome 6, complete sequence Length = 147836 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 415 ttctcctcctcctgcgcttctttctcctcctgct 448 ||||||||||||||| |||| | ||||||||||| Sbjct: 92279 ttctcctcctcctgctcttcctactcctcctgct 92246
>gb|AC091783.9| Genomic sequence for Mus musculus, clone RP23-16G10, complete sequence Length = 228160 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 403 tccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||||||||| | |||| |||||| | |||||||||| |||| |||||| Sbjct: 108604 tccgcctcttcctcctccccctcctcctcttctttctcttccttcttctc 108653
>gb|AC108527.6| Rattus norvegicus 9 BAC CH230-7F11 (Children's Hospital Oakland Research Institute) complete sequence Length = 225777 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcc 426 ||||| |||||||||||||||||||| Sbjct: 32237 cctcctcctcttctttctcctcctcc 32212
>gb|AY034936.2| Arabidopsis thaliana At3g53570 mRNA sequence Length = 1558 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcct 427 |||||||||||||| ||||||||||| Sbjct: 283 ctccgcctcttcttcctcctcctcct 308
>gb|AC163209.2| Mus musculus chromosome 3, clone RP24-117O8, complete sequence Length = 153129 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 408 ctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||| |||||||||||| | ||||| ||||||||| Sbjct: 130076 ctcttctctctcctcctcctcctcttctctctcctcct 130039
>emb|AL596185.12| Mouse DNA sequence from clone RP23-172M21 on chromosome 11 Contains the 5' end of the Centb1 gene for centaurin beta 1, the gene for a novel protein similar to protein phosphatase 1 regulatory (inhibitor) subunit 2 Ppp1r2, a novel gene, the Gps2 gene for G protein pathway suppressor 2, the Eif5a gene for eukaryotic translation initiation factor 5A, the Ybx2 gene for Y box protein 2, the Slc2a4 gene for solute carrier family 2 (facilitated glucose transporter) member 4, a non-muscle cofilin 1 (Cfl1) pseudogene, the Cldn7 gene for claudin 7, the Rai12 gene for retinoic acid induced 12, the Dullard gene for Dullard homolog (Xenopus laevis) (novel NLI interacting factor-like phosphatase), the gene for novel PHD-finger protein JUNE1, the Dvl2 gene for dishevelled 2 dsh homolog (Drosophila), the Acadvl gene for acyl-Coenzyme A dehydrogenase very long chain, the Dlgh4 gene for discs large homolog 4 (Drosophila), the Asgr1 and Asgr2 genes for asialoglycoprotein receptor 1 and 2, a ribosomal protein L26 (Rpl26) pseudogene, the 5' end of the Mgl2 gene for macrophage galactose N-acetyl-galactosamine specific lectin 2 and nine CpG islands, complete sequence Length = 248203 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Minus Query: 412 tctttctcctcctcctgcgcttctttctcctcctgcttctct 453 |||| ||||||||||| | |||||| |||||||| ||||||| Sbjct: 69605 tcttcctcctcctcctcctcttcttcctcctcctccttctct 69564 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctc 440 ||||| ||||||||| ||||||||||| | |||| ||||| Sbjct: 69595 cctcctcctcttcttcctcctcctccttctcttccttctc 69556
>gb|AC162692.2| Mus musculus chromosome 1, clone RP23-445K23, complete sequence Length = 181625 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcct 427 |||| ||||||||||||||||||||| Sbjct: 169201 ctcctcctcttctttctcctcctcct 169176
>gb|AC160132.2| Mus musculus BAC clone RP23-197I12 from chromosome 9, complete sequence Length = 202786 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 403 tccgcctcttctttctcctcctcctgcgcttctt 436 ||||||||||| ||||||||||||| | |||||| Sbjct: 135575 tccgcctcttccttctcctcctcctcctcttctt 135542
>gb|AC153857.7| Mus musculus 6 BAC RP23-158G17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215780 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 409 tcttctttctcctcctcctgcgcttctttctcct 442 ||||||||||||||||||| | | |||||||||| Sbjct: 33415 tcttctttctcctcctcctcctcctctttctcct 33448
>gb|AC126178.6| Homo sapiens 12 BAC RP11-567C2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127439 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcct 442 ||||| ||||||| ||||||||||||| | |||| ||||||| Sbjct: 62171 cctcctcctcttccttctcctcctccttctcttccttctcct 62130
>dbj|BS000535.1| Pan troglodytes chromosome Y clone:PTB-096E06, complete sequences Length = 198405 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttct 451 |||| |||| |||||||||||||||| | |||| | |||||||| ||||| Sbjct: 166433 ctcctcctcctctttctcctcctcctcctcttcctcctcctcctccttct 166482 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 409 tcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||||||||||||| | | |||||||||||||| Sbjct: 166771 tcttctttctcctcctcatccttttctttctcctcct 166807
>dbj|AK220330.1| Mus musculus mRNA for mKIAA0260 protein Length = 4016 Score = 44.1 bits (22), Expect = 0.39 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgc-ttctttctcctcctgcttct 451 |||| |||||||||||||||| | | ||||||||||| |||||||| Sbjct: 1518 cctcctctttctcctcctccttctccttctttctccttctgcttct 1563
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttct 451 |||| |||| |||||||||||||||| | |||| | |||||||| ||||| Sbjct: 19452706 ctcctcctcctctttctcctcctcctcctcttcctcctcctcctccttct 19452755 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 409 tcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||||||||||||| | | |||||||||||||| Sbjct: 19453044 tcttctttctcctcctcatccttttctttctcctcct 19453080
>gb|AC158916.4| Mus musculus chromosome 8, clone RP23-18G2, complete sequence Length = 206384 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 408 ctcttctttctcctcctcctgcgcttctttctcctcct 445 |||||| ||||||||||||| | |||| |||||||||| Sbjct: 25964 ctcttccttctcctcctcctccccttccttctcctcct 25927
>dbj|AK155171.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630205L24 product:MAP kinase-activated protein kinase 2, full insert sequence Length = 2674 Score = 44.1 bits (22), Expect = 0.39 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgc-ttctttctcctcctgcttct 451 |||| |||||||||||||||| | | ||||||||||| |||||||| Sbjct: 2411 cctcctctttctcctcctccttctccttctttctccttctgcttct 2456
>dbj|AK169775.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430021M02 product:solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1, full insert sequence Length = 3963 Score = 44.1 bits (22), Expect = 0.39 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgc-ttctttctcctcctgcttct 451 |||| |||||||||||||||| | | ||||||||||| |||||||| Sbjct: 1468 cctcctctttctcctcctccttctccttctttctccttctgcttct 1513
>dbj|AK051215.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130017K22 product:unclassifiable, full insert sequence Length = 2828 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcc 426 ||||| |||||||||||||||||||| Sbjct: 1930 cctcctcctcttctttctcctcctcc 1905 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 417 ctcctcctcctgcgcttctttctcctcct 445 ||||||||||| | ||||||||||||||| Sbjct: 1935 ctcctcctcctcctcttctttctcctcct 1907
>dbj|AK049462.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430014O21 product:UDP-GLUCURONIC ACID/UDP-N-ACETYLGALACTOSAMINE TRANSPORTER (UDP- GLCA/UDP-GALNAC TRANSPORTER) homolog [Homo sapiens], full insert sequence Length = 4024 Score = 44.1 bits (22), Expect = 0.39 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgc-ttctttctcctcctgcttct 451 |||| |||||||||||||||| | | ||||||||||| |||||||| Sbjct: 1528 cctcctctttctcctcctccttctccttctttctccttctgcttct 1573
>dbj|AK049180.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330011J09 product:similar to UDP-GLUCURONIC ACID/UDP-N-ACETYLGALACTOSAMINE TRANSPORTER (UDP- GLCA/UDP-GALNAC TRANSPORTER) [Homo sapiens], full insert sequence Length = 2894 Score = 44.1 bits (22), Expect = 0.39 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgc-ttctttctcctcctgcttct 451 |||| |||||||||||||||| | | ||||||||||| |||||||| Sbjct: 1462 cctcctctttctcctcctccttctccttctttctccttctgcttct 1507
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 342 gcgcttctttccagttgaagac 363 |||||||||||||||||||||| Sbjct: 56117 gcgcttctttccagttgaagac 56096
>gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203418 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 409 tcttctttctcctcctcctgcgcttctttctcct 442 ||||||||||||||||||| | | |||||||||| Sbjct: 158949 tcttctttctcctcctcctcctcctctttctcct 158982
>gb|AF187873.1|AF187873 Cavia porcellus inwardly-rectifying potassium channel Kir2.2 (KCNJ12) gene, complete cds Length = 9642 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctttctc 440 ||||||||||||| ||||||| | |||||||||| Sbjct: 1838 cctcttctttctcttcctcctcctcttctttctc 1805
>emb|AL845547.18| Mouse DNA sequence from clone RP23-296A4 on chromosome 2, complete sequence Length = 187738 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttc 450 ||||| |||| |||| ||||||||||| | |||||| |||||||| |||| Sbjct: 120933 cctcctcctcctcttcctcctcctcctcctcttcttcctcctcctccttc 120884
>emb|BX822243.1|CNS0A7TI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB22ZD07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1887 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcct 427 |||||||||||||| ||||||||||| Sbjct: 508 ctccgcctcttcttcctcctcctcct 533
>gb|AC093515.4| Homo sapiens chromosome 16 clone CTD-2535I10, complete sequence Length = 184182 Score = 44.1 bits (22), Expect = 0.39 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 412 tctttctcctcctcctgcgcttctttctcctcct 445 |||||||||||||||||| ||| ||||||||||| Sbjct: 52224 tctttctcctcctcctgctctt-tttctcctcct 52256
>gb|AC007381.3| Homo sapiens BAC clone RP11-158I21 from 2, complete sequence Length = 152081 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 412 tctttctcctcctcctgcgcttctttctcctcct 445 |||||||||||||||| | |||||| |||||||| Sbjct: 130150 tctttctcctcctccttctcttcttcctcctcct 130183
>gb|AC010281.4|AC010281 Homo sapiens chromosome 5 clone CTC-553B9, complete sequence Length = 160378 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcct 427 |||| ||||||||||||||||||||| Sbjct: 13999 ctccccctcttctttctcctcctcct 13974
>ref|NM_011372.1| Mus musculus ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 (St6galnac3), mRNA Length = 3903 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 408 ctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||| |||||||||||| | ||||| ||||||||| Sbjct: 3281 ctcttctctctcctcctcctcctcttctctctcctcct 3318
>gb|AC102738.9| Mus musculus chromosome 3, clone RP24-303G10, complete sequence Length = 166697 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 408 ctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||| |||||||||||| | ||||| ||||||||| Sbjct: 38662 ctcttctctctcctcctcctcctcttctctctcctcct 38625
>gb|AE016753.1| Mus musculus chromosome 10 high-growth region, section 1 of 2 of the complete sequence Length = 350029 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcc 444 ||||||||| ||||||||||| | |||||| ||||||| Sbjct: 249536 cctcttcttcctcctcctcctcctcttcttcctcctcc 249573 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgc 429 ||||| ||||||||| ||||||||||||| Sbjct: 249471 cctcctcctcttcttcctcctcctcctgc 249499
>gb|AC153366.7| Mus musculus 10 BAC RP23-243B24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184707 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttc 434 ||||| ||||||||| ||||||||||||| |||| Sbjct: 78391 cctcctcctcttcttcctcctcctcctgctcttc 78358 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcc 444 ||||||||| ||||||||||| | |||||| ||||||| Sbjct: 78355 cctcttcttcctcctcctcctcctcttcttcctcctcc 78318 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgc 429 ||||| ||||||||| ||||||||||||| Sbjct: 78421 cctcctcctcttcttcctcctcctcctgc 78393
>emb|AL929018.14| Mouse DNA sequence from clone RP23-253K17 on chromosome 2, complete sequence Length = 189343 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||||| ||||||||||||| |||| |||||||||| |||||| Sbjct: 85303 cctcttccttctcctcctcctcttcttccttctcctcctccttctc 85348
>gb|AC154265.2| Mus musculus BAC clone RP24-319O20 from 16, complete sequence Length = 206136 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 408 ctcttctttctcctcctcctgcgcttctttctcctcct 445 |||||| ||||||||||||| | |||||| |||||||| Sbjct: 179389 ctcttccttctcctcctcctcctcttcttcctcctcct 179352
>gb|AC124395.5| Mus musculus BAC clone RP24-342J3 from 13, complete sequence Length = 147971 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 431 cttctttctcctcctgcttctc 452 |||||||||||||||||||||| Sbjct: 115022 cttctttctcctcctgcttctc 115043
>gb|AC154829.2| Mus musculus BAC clone RP24-550F10 from 14, complete sequence Length = 136754 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 403 tccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||||||||| | |||| |||||| | |||||||||| |||| |||||| Sbjct: 27701 tccgcctcttcctcctccccctcctcctcttctttctcttccttcttctc 27750
>gb|AC108828.17| Mus musculus chromosome 5, clone RP23-153H17, complete sequence Length = 218103 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 399 tgcctccgcctcttctttctcctcctcctgcgcttctttctc 440 ||||||| ||||||||| ||||||||||| |||||||||| Sbjct: 68216 tgcctcctcctcttcttcctcctcctcctcttcttctttctc 68257
>gb|AC153824.9| Mus musculus 10 BAC RP23-53D13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 233119 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 417 ctcctcctcctgcgcttctttctcctcctg 446 ||||||||||||| |||| ||||||||||| Sbjct: 49237 ctcctcctcctgcccttccttctcctcctg 49208
>emb|Y11346.1|MMY11346 Mus musculus ST6GalNAcIII gene, exon 4, 5 and 6 Length = 5286 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 408 ctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||| |||||||||||| | ||||| ||||||||| Sbjct: 3894 ctcttctctctcctcctcctcctcttctctctcctcct 3931
>gb|AC107808.20| Mus musculus chromosome 9, clone RP23-61B14, complete sequence Length = 188589 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 420 ctcctcctgcgcttctttctcctcctgcttctct 453 |||||||| | ||||||||||||||| ||||||| Sbjct: 64743 ctcctcctcctcttctttctcctccttcttctct 64776 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcct 424 ||||| |||||||||||||||||| Sbjct: 64745 cctcctcctcttctttctcctcct 64768
>gb|AC154617.3| Mus musculus BAC clone RP23-319O17 from chromosome 17, complete sequence Length = 197515 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 415 ttctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||||||||||| | |||| |||||||||| |||||| Sbjct: 189349 ttctcctcctcctcctcttccttctcctcctccttctc 189386
>emb|AL645602.14| Mouse DNA sequence from clone RP23-79E13 on chromosome 11, complete sequence Length = 240483 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 411 ttctttctcctcctcctgcgcttctttctcctcctgct 448 ||||||||||||||| | | |||||| ||||||||||| Sbjct: 13502 ttctttctcctcctcttcctcttcttcctcctcctgct 13465
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcct 427 |||||||||||||| ||||||||||| Sbjct: 104662 ctccgcctcttcttcctcctcctcct 104637
>gb|AC132121.3| Mus musculus BAC clone RP24-62L21 from 13, complete sequence Length = 204277 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcc 426 ||||| |||||||||||||||||||| Sbjct: 4558 cctcctcctcttctttctcctcctcc 4583 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 417 ctcctcctcctgcgcttctttctcctcct 445 ||||||||||| | ||||||||||||||| Sbjct: 4553 ctcctcctcctcctcttctttctcctcct 4581
>gb|AC132123.3| Mus musculus BAC clone RP24-79F8 from 1, complete sequence Length = 214923 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcc 426 ||||||||||||||| |||||||||| Sbjct: 93253 cctccgcctcttcttcctcctcctcc 93278
>gb|AC151721.2| Mus musculus BAC clone RP23-68E12 from 5, complete sequence Length = 218524 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 |||| |||| ||||||||| ||| | ||||||||||||| |||||| Sbjct: 71864 cctcctcttcctcctcctcatgctcctctttctcctcctccttctc 71909
>gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complete sequence Length = 249251 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 410 cttctttctcctcctcctgcgcttctttctcctcctgcttct 451 |||||||||||||||||| | | || |||||||||| ||||| Sbjct: 34957 cttctttctcctcctcctccacctccttctcctcctccttct 34998
>gb|AC138460.4| Mus musculus BAC clone RP23-295A7 from 8, complete sequence Length = 186258 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Minus Query: 410 cttctttctcctcctcctgcgcttctttctcctcctgcttct 451 |||||||||||||||||| | | || |||||||||| ||||| Sbjct: 34821 cttctttctcctcctcctccacctccttctcctcctccttct 34780
>gb|AC132400.3| Mus musculus BAC clone RP23-400A19 from 1, complete sequence Length = 218935 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctg 428 |||||||||||||||||||||| Sbjct: 105390 cctcttctttctcctcctcctg 105411
>gb|AC140415.3| Mus musculus BAC clone RP23-127A20 from 13, complete sequence Length = 221245 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcc 426 ||||| |||||||||||||||||||| Sbjct: 201538 cctcctcctcttctttctcctcctcc 201563 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 417 ctcctcctcctgcgcttctttctcctcct 445 ||||||||||| | ||||||||||||||| Sbjct: 201533 ctcctcctcctcctcttctttctcctcct 201561
>emb|CR974483.16| Mouse DNA sequence from clone RP23-296D10 on chromosome 17, complete sequence Length = 125345 Score = 44.1 bits (22), Expect = 0.39 Identities = 45/52 (86%), Gaps = 3/52 (5%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||| |||| |||||||||||||||| | ||||||||||||| |||||| Sbjct: 95085 cctcctcctcctctttctcctcctcct---cctctttctcctcctccttctc 95037
>gb|AC153841.1| Mus musculus 6 BAC RP23-260M5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190541 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcct 427 |||| ||||||||||||||||||||| Sbjct: 104907 ctcctcctcttctttctcctcctcct 104882
>emb|AL713985.10| Mouse DNA sequence from clone RP23-104K14 on chromosome 10, complete sequence Length = 199286 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 417 ctcctcctcctgcgcttctttctcctcctg 446 ||||||||||||| |||| ||||||||||| Sbjct: 47613 ctcctcctcctgcccttccttctcctcctg 47642
>emb|AL671190.10| Mouse DNA sequence from clone RP23-464L12 on chromosome 4, complete sequence Length = 180239 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctt 436 ||||||||||||||||||||| | |||||| Sbjct: 170164 cctcttctttctcctcctcctcctcttctt 170193
>emb|AL772338.9| Mouse DNA sequence from clone RP23-47A6 on chromosome 4, complete sequence Length = 235366 Score = 44.1 bits (22), Expect = 0.39 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgc-gcttctttctcctcctgcttct 451 |||| |||||||||||||||| | |||||||||||| |||||||| Sbjct: 5702 cctcctctttctcctcctccttctccttctttctccttctgcttct 5657
>gb|U16176.1|ATU16176 Arabidopsis thaliana protein kinase (AFC1) mRNA, complete cds Length = 1732 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcct 427 |||||||||||||| ||||||||||| Sbjct: 306 ctccgcctcttcttcctcctcctcct 331
>emb|AL929473.7| Mouse DNA sequence from clone RP23-143P21 on chromosome 4, complete sequence Length = 59619 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcctgcgcttctt 436 ||||||||||||||||||||| | |||||| Sbjct: 38490 cctcttctttctcctcctcctcctcttctt 38461
>emb|Y11342.1|MMY11342 Mus musculus mRNA for GalNAc alpha-2, 6-sialyltransferase III Length = 3903 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 408 ctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||| |||||||||||| | ||||| ||||||||| Sbjct: 3281 ctcttctctctcctcctcctcctcttctctctcctcct 3318
>emb|AL365326.14| Mouse DNA sequence from clone RP23-381K21 on chromosome 1, complete sequence Length = 189860 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 417 ctcctcctcctgcgcttctttctcctcctg 446 ||||||||||| | |||||||||||||||| Sbjct: 2679 ctcctcctcctcctcttctttctcctcctg 2708 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcct 424 ||||| |||||||||||||||||| Sbjct: 2684 cctcctcctcttctttctcctcct 2707
>emb|AL591884.11| Mouse DNA sequence from clone RP23-183N8 on chromosome 2, complete sequence Length = 204495 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 402 ctccgcctcttctttctcctcctcct 427 |||| ||||||||||||||||||||| Sbjct: 39168 ctcctcctcttctttctcctcctcct 39143
>emb|AL731801.11| Mouse DNA sequence from clone RP23-181L15 on chromosome X, complete sequence Length = 197346 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttc 450 ||||| ||||||||| ||||||||||| | |||| | |||||||| |||| Sbjct: 165825 cctcctcctcttcttcctcctcctcctcctcttcctcctcctccttcttc 165776
>dbj|D45354.1|ATHPKAME2B Arabidopsis thaliana AME2 mRNA for protein kinase, complete cds Length = 1716 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 402 ctccgcctcttctttctcctcctcct 427 |||||||||||||| ||||||||||| Sbjct: 286 ctccgcctcttcttcctcctcctcct 311
>gb|AC138358.12| Mus musculus chromosome 1, clone RP24-147G10, complete sequence Length = 180227 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 409 tcttctttctcctcctcctgcgcttctttctcctcctgcttctct 453 ||||||| ||||||||||| | | |||| |||||||| ||||||| Sbjct: 135751 tcttcttcctcctcctcctcctcctcttcctcctcctccttctct 135795
>gb|AC114663.8| Mus musculus chromosome 1, clone RP24-172O22, complete sequence Length = 167652 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcct 427 ||||||||||||||||||||| Sbjct: 31679 cctcttctttctcctcctcct 31699
>gb|AC120173.9| Mus musculus chromosome 1, clone RP24-485J8, complete sequence Length = 189779 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| |||| ||||||||||| | |||| |||||||||| Sbjct: 34586 cctcctcctcctcttcctcctcctcctcctcttccttctcctcct 34630
>gb|AC166773.7| Mus musculus chromosome 7, clone RP24-303J15, complete sequence Length = 193859 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 409 tcttctttctcctcctcctgcgcttctttctcctcct 445 |||||||||||||||||| | |||||| |||||||| Sbjct: 86313 tcttctttctcctcctccccctcttcttcctcctcct 86349
>gb|AC161382.4| Mus musculus BAC clone RP23-25A17 from chromosome 9, complete sequence Length = 169123 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcct 427 ||||||||||||||||||||| Sbjct: 11716 cctcttctttctcctcctcct 11736
>gb|AC162176.2| Mus musculus BAC clone RP24-446P15 from chromosome 9, complete sequence Length = 204098 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 408 ctcttctttctcctcctcctgcgcttctttctcctcctgcttctc 452 ||||||| |||||||||||| | |||| || ||||||| |||||| Sbjct: 73234 ctcttctgtctcctcctcctcctcttccttttcctcctccttctc 73278
>gb|AC166060.2| Mus musculus BAC clone RP23-185O8 from chromosome 9, complete sequence Length = 198365 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcct 427 ||||||||||||||||||||| Sbjct: 36138 cctcttctttctcctcctcct 36158
>gb|AC108768.14| Mus musculus chromosome 8, clone RP23-398L15, complete sequence Length = 209808 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 407 cctcttctttctcctcctcct 427 ||||||||||||||||||||| Sbjct: 157805 cctcttctttctcctcctcct 157785
>gb|AC102749.10| Mus musculus chromosome 5, clone RP24-478I4, complete sequence Length = 173437 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcctgcttctct 453 ||||| ||||||| | ||||||||||| | |||| | |||||||| ||||||| Sbjct: 140737 cctcctcctcttcctcctcctcctcctcctcttcctcctcctcctccttctct 140685
>gb|AC156952.22| Mus musculus 10 BAC RP24-385D2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179140 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||||||||||||||| |||| | | || |||||||||| Sbjct: 146766 cctcctcctcttctttctcctcttcctcctcctccttctcctcct 146722
>gb|AC153494.25| Mus musculus 10 BAC RP23-345J24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 231991 Score = 42.1 bits (21), Expect = 1.5 Identities = 38/43 (88%), Gaps = 3/43 (6%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctc 443 ||||| |||| |||||||||||||||| ||||||||||||| Sbjct: 110715 cctcctcctcctctttctcctcctcct---cttctttctcctc 110676 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||||||||||||||| |||| | |||| | |||||||| Sbjct: 110697 cctcctcctcttctttctcctcttcctcctcttcctcctcctcct 110653 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| ||||||| |||||||| | | ||||||||||||| Sbjct: 110547 cctcctcctcctctttcttctcctcctcctcctctttctcctcct 110503 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 401 cctccgcctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||| |||| |||||||||||||||| | |||| | |||||||| Sbjct: 110490 cctcctcctcctctttctcctcctcctcctcttcctcctcctcct 110446
>gb|AC102219.11| Mus musculus chromosome 15, clone RP24-96K14, complete sequence Length = 194425 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcctc 425 ||||| ||||||||||||||||||| Sbjct: 100454 cctcctcctcttctttctcctcctc 100478 Score = 42.1 bits (21), Expect = 1.5 Identities = 35/39 (89%), Gaps = 3/39 (7%) Strand = Plus / Plus Query: 407 cctcttctttctcctcctcctgcgcttctttctcctcct 445 ||||||| ||||||||||||| ||||||||||||||| Sbjct: 100328 cctcttccttctcctcctcct---cttctttctcctcct 100363 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcct 424 ||||| |||||||||||||||||| Sbjct: 100397 cctcctcctcttctttctcctcct 100420 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 cctccgcctcttctttctcctcct 424 ||||| |||||||||||||||||| Sbjct: 100340 cctcctcctcttctttctcctcct 100363 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,321,895 Number of Sequences: 3902068 Number of extensions: 5321895 Number of successful extensions: 149254 Number of sequences better than 10.0: 912 Number of HSP's better than 10.0 without gapping: 889 Number of HSP's successfully gapped in prelim test: 23 Number of HSP's that attempted gapping in prelim test: 143371 Number of HSP's gapped (non-prelim): 5631 length of query: 453 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 431 effective length of database: 17,147,199,772 effective search space: 7390443101732 effective search space used: 7390443101732 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
